Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0763G163 Amborella trichopoda HOM05D007226 ORTHO05D009160 1.8e-116 422.5 201 100.0
MD05G1252700 Malus domestica HOM05D007226 ORTHO05D009160 3.0e-47 192.6 169 56.8
HanXRQChr14g0447221 Helianthus annuus HOM05D007226 ORTHO05D009160 2.5e-46 189.5 195 51.3
Aa31LG9G8170 Aethionema arabicum HOM05D007226 ORTHO05D009160 4.3e-46 188.7 160 59.4
Manes.16G056825 Manihot esculenta HOM05D007226 ORTHO05D009160 4.3e-46 188.7 177 54.2
TWI38G0719 Tripterygium wilfordii HOM05D007226 ORTHO05D009160 1.6e-45 186.8 182 51.6
Prupe.4G111200 Prunus persica HOM05D007226 ORTHO05D009160 2.1e-45 186.4 161 59.6
Cfa000717 Carpinus fangiana HOM05D007226 ORTHO05D009160 4.7e-45 185.3 173 53.2
FvH4_3g12220 Fragaria vesca HOM05D007226 ORTHO05D009160 6.2e-45 184.9 168 56.0
Rhsim02G0212700 Rhododendron simsii HOM05D007226 ORTHO05D009160 6.2e-45 184.9 190 52.1
Ciclev10017084m.g Citrus clementina HOM05D007226 ORTHO05D009160 1.1e-44 184.1 169 53.8
Lalb_Chr05g0219731 Lupinus albus HOM05D007226 ORTHO05D009160 1.4e-44 183.7 167 53.3
Potri.015G121101 Populus trichocarpa HOM05D007226 ORTHO05D009160 1.4e-44 183.7 192 50.5
CiPaw.09G078000 Carya illinoinensis HOM05D007226 ORTHO05D009160 1.8e-44 183.3 177 52.0
Thecc.06G141800 Theobroma cacao HOM05D007226 ORTHO05D009160 2.3e-44 183.0 170 54.1
GSVIVG01012076001 Vitis vinifera HOM05D007226 ORTHO05D009160 4.0e-44 182.2 172 53.5
Ca_18766_v3 Cicer arietinum L. HOM05D007226 ORTHO05D009160 6.8e-44 181.4 179 50.3
Medtr4g083990 Medicago truncatula HOM05D007226 ORTHO05D009160 6.8e-44 181.4 181 49.2
Dinv05963 Davidia involucrata HOM05D007226 ORTHO05D009160 8.9e-44 181.0 185 50.8
FAN21G0149 Fragaria x ananassa HOM05D007226 ORTHO05D009160 1.2e-43 180.6 166 55.4
Actinidia22392 Actinidia chinensis HOM05D007226 ORTHO05D009160 1.5e-43 180.3 171 52.6
Sopen02g018030 Solanum pennellii HOM05D007226 ORTHO05D009160 2.6e-43 179.5 197 51.3
FAN25G1348 Fragaria x ananassa HOM05D007226 ORTHO05D009160 3.4e-43 179.1 168 54.2
Solyc02g068930.4 Solanum lycopersicum HOM05D007226 ORTHO05D009160 4.4e-43 178.7 160 56.9
COL.COLO4_30987 Corchorus olitorius HOM05D007226 ORTHO05D009160 5.8e-43 178.3 168 55.4
Sabra15G0137600 Salix brachista HOM05D007226 ORTHO05D009160 5.8e-43 178.3 197 49.7
Gohir.A06G141000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 7.5e-43 177.9 157 55.4
Gohir.D06G145000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 9.8e-43 177.6 153 56.9
Gorai.010G168700 Gossypium raimondii HOM05D007226 ORTHO05D009160 9.8e-43 177.6 153 56.9
PGSC0003DMG400010353 Solanum tuberosum HOM05D007226 ORTHO05D009160 9.8e-43 177.6 197 50.8
Nn7g38162 Nelumbo nucifera HOM05D007226 ORTHO05D009160 1.3e-42 177.2 178 51.7
ECA238G0615 Erigeron canadensis HOM05D007226 ORTHO05D009160 3.7e-42 175.6 185 51.4
TAR371G1071 Trochodendron aralioides HOM05D007226 ORTHO05D009160 3.7e-42 175.6 172 54.1
Lsat_1_v5_gn_2_62900 Lactuca sativa HOM05D007226 ORTHO05D009160 4.9e-42 175.3 185 50.8
Phvul.002G098700 Phaseolus vulgaris HOM05D007226 ORTHO05D009160 4.9e-42 175.3 162 53.1
AL8G14200 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 6.4e-42 174.9 180 50.0
VMungo0251G0617 Vigna mungo HOM05D007226 ORTHO05D009160 6.4e-42 174.9 157 54.1
Glyma.07G221900 Glycine max HOM05D007226 ORTHO05D009160 8.3e-42 174.5 174 50.6
AL8G14380 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 1.1e-41 174.1 180 50.0
Cpa.g.sc135.15 Carica papaya HOM05D007226 ORTHO05D009160 1.1e-41 174.1 174 50.6
CDE06G2689 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 1.1e-41 174.1 175 52.6
RcHm_v2.0_Chr5g0020011 Rosa chinensis HOM05D007226 ORTHO05D009160 1.1e-41 174.1 150 56.7
SGA_v2.0_scaffold175G39365 Striga asiatica HOM05D007226 ORTHO05D009160 1.1e-41 174.1 193 48.7
QL11p017833 Quercus lobata HOM05D007226 ORTHO05D009160 1.4e-41 173.7 204 47.5
CSS0023119 Camellia sinensis var. sinensis HOM05D007226 ORTHO05D009160 1.9e-41 173.3 167 51.5
CAN.G149.55 Capsicum annuum HOM05D007226 ORTHO05D009160 1.9e-41 173.3 157 56.7
CDE02G1897 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 1.9e-41 173.3 184 52.2
Cc09_g06180 Coffea canephora HOM05D007226 ORTHO05D009160 1.9e-41 173.3 189 47.6
Thhalv10001050m.g Eutrema salsugineum HOM05D007226 ORTHO05D009160 1.9e-41 173.3 159 54.1
Lj4g0002757 Lotus japonicus HOM05D007226 ORTHO05D009160 1.9e-41 173.3 160 53.8
Nitab4.5_0003773g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 1.9e-41 173.3 160 55.0
CARHR177680 Cardamine hirsuta HOM05D007226 ORTHO05D009160 2.4e-41 172.9 183 49.7
Migut.M01975 Erythranthe guttata HOM05D007226 ORTHO05D009160 4.1e-41 172.2 157 55.4
PGR004G0179 Punica granatum HOM05D007226 ORTHO05D009160 4.1e-41 172.2 158 53.8
Ah.05g171090 Amaranthus hybridus HOM05D007226 ORTHO05D009160 7.0e-41 171.4 160 53.8
AT5G45040 Arabidopsis thaliana HOM05D007226 ORTHO05D009160 9.2e-41 171.0 159 53.5
Atru.chr10.515 Acer truncatum HOM05D007226 ORTHO05D009160 1.6e-40 170.2 159 56.0
Duzib192G0307 Durio zibethinus HOM05D007226 ORTHO05D009160 1.6e-40 170.2 156 54.5
DCAR_004326 Daucus carota HOM05D007226 ORTHO05D009160 2.1e-40 169.9 153 55.6
BcaB07g30483 Brassica carinata HOM05D007226 ORTHO05D009160 6.0e-40 168.3 155 53.5
SalBow6G7060 Salvia bowleyana HOM05D007226 ORTHO05D009160 7.8e-40 167.9 188 48.4
SalBow8G0530 Salvia bowleyana HOM05D007226 ORTHO05D009160 7.8e-40 167.9 188 48.4
BraA02t07911Z Brassica rapa HOM05D007226 ORTHO05D009160 1.0e-39 167.5 179 49.2
ClCG01G025800 Citrullus lanatus HOM05D007226 ORTHO05D009160 1.3e-39 167.2 162 50.6
BcaC03g16718 Brassica carinata HOM05D007226 ORTHO05D009160 3.0e-39 166.0 155 52.3
Carub.0008s0327 Capsella rubella HOM05D007226 ORTHO05D009160 3.0e-39 166.0 179 49.2
arahy.Tifrunner.gnm1.ann1.X3ZR55 Arachis hypogaea HOM05D007226 ORTHO05D009160 3.9e-39 165.6 159 52.8
C02p45740 Brassica napus HOM05D007226 ORTHO05D009160 3.9e-39 165.6 155 52.3
BolC2t10627H Brassica oleracea HOM05D007226 ORTHO05D009160 3.9e-39 165.6 155 52.3
BolC2t10635H Brassica oleracea HOM05D007226 ORTHO05D009160 5.1e-39 165.2 155 51.6
Nitab4.5_0001288g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 5.1e-39 165.2 162 54.9
A02p28790 Brassica napus HOM05D007226 ORTHO05D009160 6.6e-39 164.9 155 52.9
Eucgr.E01876 Eucalyptus grandis HOM05D007226 ORTHO05D009160 6.6e-39 164.9 170 49.4
Sp2g09820 Schrenkiella parvula HOM05D007226 ORTHO05D009160 2.5e-38 162.9 179 48.6
Haze_06036 Corylus avellana HOM05D007226 ORTHO05D009160 5.6e-38 161.8 171 51.5
Aqoxy1G01459 Aquilegia oxysepala HOM05D007226 ORTHO05D009160 1.2e-37 160.6 164 50.0
Peaxi162Scf00149g00723 Petunia axillaris HOM05D007226 ORTHO05D009160 1.6e-37 160.2 138 55.1
Oeu056023.2 Olea europaea HOM05D007226 ORTHO05D009160 2.1e-37 159.8 131 57.3
THA.LOC104812913 Tarenaya hassleriana HOM05D007226 ORTHO05D009160 8.1e-37 157.9 156 51.9
TPR.G20974 Trifolium pratense HOM05D007226 ORTHO05D009160 1.4e-36 157.1 141 51.1
arahy.Tifrunner.gnm1.ann1.8FEK6M Arachis hypogaea HOM05D007226 ORTHO05D009160 1.8e-36 156.8 140 55.0
vmacro03514 Vaccinium macrocarpon HOM05D007226 ORTHO05D009160 1.8e-36 156.8 219 44.3
CsaV3_6G053010 Cucumis sativus L. HOM05D007226 ORTHO05D009160 5.2e-36 155.2 160 49.4
PSO675G1576 Papaver somniferum HOM05D007226 ORTHO05D009160 2.0e-35 153.3 188 44.7
MELO3C007008.2 Cucumis melo HOM05D007226 ORTHO05D009160 9.9e-35 151.0 129 53.5
SEGI_36655 Sequoiadendron giganteum HOM05D007226 ORTHO05D009160 4.9e-34 148.7 151 50.3
Sed0015403 Sechium edule HOM05D007226 ORTHO05D009160 1.3e-31 140.6 126 52.4
AUR62014337 Chenopodium quinoa HOM05D005358 ORTHO05D006384 1.5e-30 137.1 139 48.9
Sc15g0002750 Simmondsia chinensis HOM05D007226 ORTHO05D009160 1.9e-30 136.7 131 47.3
C02p45640 Brassica napus HOM05D007226 ORTHO05D009160 1.2e-29 134.0 134 50.0
SMO356G0712 Selaginella moellendorffii HOM05D007226 ORTHO05D009160 2.8e-29 132.9 150 45.3
Pp3c13_8590 Physcomitrium patens HOM05D007226 ORTHO05D009160 3.6e-29 132.5 141 46.1
Mapoly0135s0037 Marchantia polymorpha HOM05D007226 ORTHO05D009160 1.8e-28 130.2 136 47.1
AagrBONN_evm.TU.Sc2ySwM_369.234 Anthoceros agrestis HOM05D007226 ORTHO05D009160 6.8e-28 128.3 155 41.3
Psat7g130920 Pisum sativum HOM05D007226 ORTHO05D009160 1.7e-26 123.6 144 44.4
HanXRQChr14g0447281 Helianthus annuus HOM05D007226 ORTHO05D009160 3.5e-24 115.9 134 47.8
MBI19_g38421_MAGBIO Magnolia biondii HOM05D007226 ORTHO05D009160 1.7e-23 113.6 190 38.4
HPP92_015945 Vanilla planifolia HOM05D007226 ORTHO05D009160 1.1e-22 110.9 145 46.2
Hma1.2p1_0040F.1_g025140 Hydrangea macrophylla HOM05D007226 ORTHO05D009160 2.1e-21 106.7 59 74.6
MCO04G097 Micromonas commoda HOM05D007226 ORTHO05D009160 1.5e-19 100.5 153 35.9
Cre16.g670950 Chlamydomonas reinhardtii HOM05D007226 ORTHO05D009160 2.6e-19 99.8 120 40.0
Glyma.20G020600 Glycine max HOM05D007226 ORTHO05D009160 3.4e-19 99.4 161 36.6
Lj2C351T11 Lonicera japonica HOM05D007226 ORTHO05D009160 3.0e-15 86.3 99 44.4
PRCOL_00005064 Prasinoderma coloniale HOM05D007226 ORTHO05D009160 3.3e-14 82.8 125 36.8
MD10G1233800 Malus domestica HOM05D007226 ORTHO05D009160 4.3e-14 82.4 92 47.8
PSO541G5038 Papaver somniferum HOM05D007226 ORTHO05D009160 7.3e-14 81.6 111 43.2
HPP92_015957 Vanilla planifolia HOM05D007226 ORTHO05D009160 1.3e-07 60.8 55 49.1
HPP92_015909 Vanilla planifolia HOM05D001129 ORTHO05D003157 7.4e-06 55.1 26 80.8


User provided reference genes

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