Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0763G160 Amborella trichopoda HOM05D000016 ORTHO05D063249 7.2e-30 133.3 68 100.0
ATR0763G264 Amborella trichopoda HOM05D000016 ORTHO05D000109 1.8e-12 75.5 51 74.5
ATR0032G001 Amborella trichopoda HOM05D000016 ORTHO05D026580 2.6e-11 71.6 50 72.0
ATR0763G068 Amborella trichopoda HOM05D000016 ORTHO05D000109 9.1e-09 63.2 49 61.2
ATR0763G185 Amborella trichopoda HOM05D000016 ORTHO05D000109 9.1e-09 63.2 50 58.0
ATR0763G228 Amborella trichopoda HOM05D000016 ORTHO05D000109 9.1e-09 63.2 35 85.7
ATR0579G051 Amborella trichopoda HOM05D000016 ORTHO05D000109 2.7e-08 61.6 33 87.9
arahy.Tifrunner.gnm1.ann1.1G2EUX Arachis hypogaea HOM05D000016 ORTHO05D000109 7.7e-08 60.1 50 56.0
SalBow6G0021 Salvia bowleyana HOM05D000016 ORTHO05D000109 1.0e-07 59.7 50 62.0
SalBow6G5414 Salvia bowleyana HOM05D000016 ORTHO05D000109 1.0e-07 59.7 50 62.0
MBI13_g07370_MAGBIO Magnolia biondii HOM05D000016 ORTHO05D000109 1.7e-07 58.9 51 60.8
ATR1155G041 Amborella trichopoda HOM05D000016 ORTHO05D000109 2.3e-07 58.5 33 84.8
MBI13_g07372_MAGBIO Magnolia biondii HOM05D000016 ORTHO05D000109 2.3e-07 58.5 50 60.0
arahy.Tifrunner.gnm1.ann1.X8HWK3 Arachis hypogaea HOM05D000016 ORTHO05D000109 3.8e-07 57.8 50 54.0
HanXRQChr16g0523321 Helianthus annuus HOM05D000016 ORTHO05D000109 3.8e-07 57.8 50 52.0
Ca_10638_v3 Cicer arietinum L. HOM05D000016 ORTHO05D000109 8.6e-07 56.6 50 54.0
HanXRQChr16g0523681 Helianthus annuus HOM05D000016 ORTHO05D000109 8.6e-07 56.6 50 50.0
MBI13_g23450_MAGBIO Magnolia biondii HOM05D000016 ORTHO05D000109 8.6e-07 56.6 50 58.0
Gohir.A12G204700 Gossypium hirsutum HOM05D000016 ORTHO05D000109 1.1e-06 56.2 51 58.8
Gohir.D12G207100 Gossypium hirsutum HOM05D000016 ORTHO05D000109 1.1e-06 56.2 51 58.8
Gorai.008G222500 Gossypium raimondii HOM05D000016 ORTHO05D000109 1.1e-06 56.2 51 58.8
HanXRQChr16g0523331 Helianthus annuus HOM05D000016 ORTHO05D000109 1.1e-06 56.2 50 50.0
Lsat_1_v5_gn_4_37601 Lactuca sativa HOM05D000016 ORTHO05D000109 1.1e-06 56.2 50 50.0
MBI16_g22908_MAGBIO Magnolia biondii HOM05D000016 ORTHO05D000109 1.1e-06 56.2 50 58.0
MBI16_g31593_MAGBIO Magnolia biondii HOM05D000016 ORTHO05D000109 1.1e-06 56.2 50 58.0
Thecc.03G313600 Theobroma cacao HOM05D000016 ORTHO05D000109 1.1e-06 56.2 51 58.8
Hma1.2p1_0970F.1_g242700 Hydrangea macrophylla HOM05D000016 ORTHO05D000109 1.5e-06 55.8 53 52.8
Ciclev10028270m.g Citrus clementina HOM05D000016 ORTHO05D000109 1.9e-06 55.5 52 55.8
Ciclev10028273m.g Citrus clementina HOM05D000016 ORTHO05D000109 1.9e-06 55.5 52 53.8
Ciclev10030181m.g Citrus clementina HOM05D000016 ORTHO05D000109 1.9e-06 55.5 52 53.8
Haze_16734 Corylus avellana HOM05D000016 ORTHO05D000109 1.9e-06 55.5 50 60.0
Haze_16735 Corylus avellana HOM05D000016 ORTHO05D000109 1.9e-06 55.5 50 60.0
TAR622G1225 Trochodendron aralioides HOM05D000016 ORTHO05D000109 1.9e-06 55.5 50 52.0
CiPaw.12G101600 Carya illinoinensis HOM05D000016 ORTHO05D000109 2.5e-06 55.1 50 56.0
Dinv37722 Davidia involucrata HOM05D000016 ORTHO05D000109 2.5e-06 55.1 50 54.0
Dinv37724 Davidia involucrata HOM05D000016 ORTHO05D000109 2.5e-06 55.1 50 54.0
FAN22G1420 Fragaria x ananassa HOM05D000016 ORTHO05D000109 2.5e-06 55.1 49 55.1
TAR418G0002 Trochodendron aralioides HOM05D000016 ORTHO05D000109 2.5e-06 55.1 50 58.0
GSVIVG01027551001 Vitis vinifera HOM05D000016 ORTHO05D000109 2.5e-06 55.1 50 58.0
Cfa019975 Carpinus fangiana HOM05D000016 ORTHO05D000109 3.3e-06 54.7 50 54.0
Ciclev10028278m.g Citrus clementina HOM05D000016 ORTHO05D000109 3.3e-06 54.7 50 52.0
Haze_09005 Corylus avellana HOM05D000016 ORTHO05D000109 3.3e-06 54.7 52 55.8
Haze_20260 Corylus avellana HOM05D000016 ORTHO05D000109 3.3e-06 54.7 50 54.0
QL01p010966 Quercus lobata HOM05D000016 ORTHO05D000109 3.3e-06 54.7 50 58.0
RcHm_v2.0_Chr4g0430841 Rosa chinensis HOM05D000016 ORTHO05D000109 3.3e-06 54.7 52 57.7
RcHm_v2.0_Chr7g0208051 Rosa chinensis HOM05D000016 ORTHO05D000109 3.3e-06 54.7 51 54.9
VMungo0251G3318 Vigna mungo HOM05D000016 ORTHO05D000109 3.3e-06 54.7 50 58.0
Actinidia12073 Actinidia chinensis HOM05D000016 ORTHO05D000109 4.2e-06 54.3 50 54.0
Ciclev10028276m.g Citrus clementina HOM05D000016 ORTHO05D000109 4.2e-06 54.3 52 53.8
FAN09G1961 Fragaria x ananassa HOM05D000016 ORTHO05D000109 4.2e-06 54.3 55 47.3
FAN14G5458 Fragaria x ananassa HOM05D000016 ORTHO05D000109 4.2e-06 54.3 55 49.1
Ciclev10028275m.g Citrus clementina HOM05D000016 ORTHO05D000109 5.5e-06 53.9 52 51.9
Ciclev10028488m.g Citrus clementina HOM05D000016 ORTHO05D000109 5.5e-06 53.9 50 52.0
FAN12G0567 Fragaria x ananassa HOM05D000016 ORTHO05D000109 5.5e-06 53.9 50 54.0
Hma1.2p1_0687F.1_g203510 Hydrangea macrophylla HOM05D000016 ORTHO05D000109 5.5e-06 53.9 50 56.0
Manes.02G028700 Manihot esculenta HOM05D000016 ORTHO05D000109 5.5e-06 53.9 50 56.0
THA.LOC104801999 Tarenaya hassleriana HOM05D000016 ORTHO05D000109 5.5e-06 53.9 50 54.0
Ciclev10028268m.g Citrus clementina HOM05D000016 ORTHO05D000109 7.2e-06 53.5 52 51.9
Eucgr.D01633 Eucalyptus grandis HOM05D000016 ORTHO05D000109 7.2e-06 53.5 52 50.0
Eucgr.D01636 Eucalyptus grandis HOM05D000016 ORTHO05D000109 7.2e-06 53.5 52 50.0
HanXRQChr01g0025121 Helianthus annuus HOM05D000016 ORTHO05D000109 7.2e-06 53.5 50 50.0
HanXRQChr17g0557091 Helianthus annuus HOM05D000016 ORTHO05D000109 7.2e-06 53.5 50 50.0
Oeu031990.1 Olea europaea HOM05D000025 ORTHO05D000136 7.2e-06 53.5 50 54.0
PGR031G3993 Punica granatum HOM05D000016 ORTHO05D000109 7.2e-06 53.5 50 56.0
GSVIVG01019909001 Vitis vinifera HOM05D000016 ORTHO05D000109 7.2e-06 53.5 40 60.0
BcaC02g10198 Brassica carinata HOM05D000016 ORTHO05D000109 9.5e-06 53.1 50 56.0
C04p31660 Brassica napus HOM05D000016 ORTHO05D000109 9.5e-06 53.1 50 56.0
BolC4t24713H Brassica oleracea HOM05D000016 ORTHO05D000109 9.5e-06 53.1 50 56.0
BraA04t15850Z Brassica rapa HOM05D000016 ORTHO05D000109 9.5e-06 53.1 50 56.0
CSS0007391 Camellia sinensis var. sinensis HOM05D000016 ORTHO05D000109 9.5e-06 53.1 50 50.0
CiPaw.12G101900 Carya illinoinensis HOM05D000016 ORTHO05D000109 9.5e-06 53.1 52 53.8
Ciclev10028257m.g Citrus clementina HOM05D000016 ORTHO05D000109 9.5e-06 53.1 52 51.9
Ciclev10028269m.g Citrus clementina HOM05D000016 ORTHO05D000109 9.5e-06 53.1 50 52.0
Hma1.2p1_2274F.1_g318590 Hydrangea macrophylla HOM05D000016 ORTHO05D000109 9.5e-06 53.1 50 52.0
Potri.001G113900 Populus trichocarpa HOM05D000016 ORTHO05D000109 9.5e-06 53.1 50 52.0
QL05p081520 Quercus lobata HOM05D000016 ORTHO05D000109 9.5e-06 53.1 50 58.0
THA.LOC104817259 Tarenaya hassleriana HOM05D000016 ORTHO05D000109 9.5e-06 53.1 50 52.0


User provided reference genes

Program Settings