Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0763G133 Amborella trichopoda HOM05D004564 ORTHO05D006106 0.0e+00 1106.7 591 100.0
TAR369G0268 Trochodendron aralioides HOM05D004564 ORTHO05D006106 1.5e-192 676.8 548 68.2
Nn7g37923 Nelumbo nucifera HOM05D004564 ORTHO05D006106 1.0e-188 664.1 548 63.3
Prupe.3G177800 Prunus persica HOM05D004564 ORTHO05D006106 4.1e-182 642.1 509 70.3
PSO170G0418 Papaver somniferum HOM05D004564 ORTHO05D006106 4.6e-181 638.6 544 61.6
PSO782G0424 Papaver somniferum HOM05D004564 ORTHO05D006106 1.9e-179 633.3 543 61.0
CiPaw.04G137200 Carya illinoinensis HOM05D004564 ORTHO05D006106 3.3e-179 632.5 546 61.5
Aqoxy1G01488 Aquilegia oxysepala HOM05D004564 ORTHO05D006106 1.2e-178 630.6 552 63.8
vmacro08736 Vaccinium macrocarpon HOM05D004564 ORTHO05D006106 3.6e-178 629.0 514 62.8
GSVIVG01020836001 Vitis vinifera HOM05D004564 ORTHO05D006106 1.1e-177 627.5 549 60.8
RcHm_v2.0_Chr2g0152251 Rosa chinensis HOM05D004564 ORTHO05D006106 4.0e-177 625.5 533 62.5
Manes.01G123700 Manihot esculenta HOM05D004564 ORTHO05D006106 1.5e-176 623.6 509 63.7
CSS0004840 Camellia sinensis var. sinensis HOM05D004564 ORTHO05D006106 5.8e-176 621.7 551 60.4
FAN05G0785 Fragaria x ananassa HOM05D004564 ORTHO05D006106 1.3e-175 620.5 533 61.5
CANSAT25G1027 Cannabis sativa HOM05D004564 ORTHO05D006106 3.8e-175 619.0 548 63.3
MD09G1148300 Malus domestica HOM05D004564 ORTHO05D006106 4.9e-175 618.6 549 65.4
Rhsim12G0010800 Rhododendron simsii HOM05D004564 ORTHO05D006106 4.9e-175 618.6 549 59.6
FAN09G3866 Fragaria x ananassa HOM05D004564 ORTHO05D006106 1.1e-174 617.5 533 61.4
Ciclev10030760m.g Citrus clementina HOM05D004564 ORTHO05D006106 1.9e-174 616.7 547 60.3
Potri.004G081200 Populus trichocarpa HOM05D004564 ORTHO05D006106 2.1e-173 613.2 546 60.1
FvH4_6g38720 Fragaria vesca HOM05D004564 ORTHO05D006106 4.6e-173 612.1 533 61.2
FAN14G4455 Fragaria x ananassa HOM05D004564 ORTHO05D006106 4.6e-173 612.1 533 61.2
Ca_06263_v3 Cicer arietinum L. HOM05D004564 ORTHO05D006106 6.0e-173 611.7 512 64.1
Sopen08g021130 Solanum pennellii HOM05D004564 ORTHO05D006106 1.3e-172 610.5 549 59.0
Os12g0626300 Oryza sativa ssp. japonica HOM05D004564 ORTHO05D006106 1.7e-172 610.1 555 60.0
Sabra04G0053900 Salix brachista HOM05D004564 ORTHO05D006106 1.7e-172 610.1 546 59.9
arahy.Tifrunner.gnm1.ann1.PNUX2Z Arachis hypogaea HOM05D004564 ORTHO05D006106 6.6e-172 608.2 507 65.7
QL08p045017 Quercus lobata HOM05D004564 ORTHO05D006106 3.3e-171 605.9 620 55.3
Gohir.D11G164200 Gossypium hirsutum HOM05D004564 ORTHO05D006106 4.3e-171 605.5 548 63.0
Glyma.14G030500 Glycine max HOM05D004564 ORTHO05D006106 5.6e-171 605.1 546 61.9
arahy.Tifrunner.gnm1.ann1.THQ3DC Arachis hypogaea HOM05D004564 ORTHO05D006106 1.3e-170 604.0 507 65.3
Gohir.A11G157200 Gossypium hirsutum HOM05D004564 ORTHO05D006106 1.3e-170 604.0 511 65.6
Gorai.007G175000 Gossypium raimondii HOM05D004564 ORTHO05D006106 2.8e-170 602.8 511 65.4
DCAR_016941 Daucus carota HOM05D004564 ORTHO05D006106 3.6e-170 602.4 548 58.8
CsaV3_4G007910 Cucumis sativus L. HOM05D004564 ORTHO05D006106 1.1e-169 600.9 549 59.6
Atru.chr6.2044 Acer truncatum HOM05D004564 ORTHO05D006106 1.4e-169 600.5 549 62.8
Phvul.008G194400 Phaseolus vulgaris HOM05D004564 ORTHO05D006106 1.8e-169 600.1 546 60.8
VMungo0647G1349 Vigna mungo HOM05D004564 ORTHO05D006106 3.1e-169 599.4 546 61.2
Lj1g0025808 Lotus japonicus HOM05D004564 ORTHO05D006106 6.9e-169 598.2 546 57.9
TWI59G1136 Tripterygium wilfordii HOM05D004564 ORTHO05D006106 9.0e-169 597.8 551 58.1
Duzib133G1099 Durio zibethinus HOM05D004564 ORTHO05D006106 2.0e-168 596.7 549 61.7
Thecc.01G168400 Theobroma cacao HOM05D004564 ORTHO05D006106 2.0e-168 596.7 549 61.9
TPR.G10155 Trifolium pratense HOM05D004564 ORTHO05D006106 2.0e-168 596.7 549 57.4
LjContig00049g0003012 Lotus japonicus HOM05D004564 ORTHO05D006106 4.4e-168 595.5 512 59.8
Zm00001eb128180 Zea mays HOM05D004564 ORTHO05D006106 1.3e-167 594.0 555 58.2
Cpa.g.sc119.28 Carica papaya HOM05D004564 ORTHO05D006106 1.7e-167 593.6 532 59.8
SalBow7G3717 Salvia bowleyana HOM05D004564 ORTHO05D006106 1.7e-167 593.6 549 58.3
Actinidia32511 Actinidia chinensis HOM05D004564 ORTHO05D006106 2.2e-167 593.2 550 58.7
Migut.M00072 Erythranthe guttata HOM05D004564 ORTHO05D006106 2.9e-167 592.8 552 61.2
Lj1A591G26 Lonicera japonica HOM05D004564 ORTHO05D006106 6.4e-167 591.7 577 56.3
COL.COLO4_38399 Corchorus olitorius HOM05D004564 ORTHO05D006106 6.0e-165 585.1 509 63.7
Sc06g0007580 Simmondsia chinensis HOM05D004564 ORTHO05D006106 7.9e-165 584.7 511 60.3
MSTRG.6616 Avicennia marina HOM05D004564 ORTHO05D006106 3.0e-164 582.8 549 57.6
Solyc08g067190.4 Solanum lycopersicum HOM05D004564 ORTHO05D006106 5.1e-164 582.0 597 53.6
Medtr5g091020 Medicago truncatula HOM05D004564 ORTHO05D006106 1.5e-163 580.5 510 62.4
Eucgr.A02026 Eucalyptus grandis HOM05D004564 ORTHO05D006106 3.6e-162 575.9 508 62.8
PGR042G1847 Punica granatum HOM05D004564 ORTHO05D006106 3.6e-162 575.9 534 59.0
Cc05_g01430 Coffea canephora HOM05D004564 ORTHO05D006106 1.8e-161 573.5 549 56.3
Haze_13558 Corylus avellana HOM05D004564 ORTHO05D006106 2.0e-160 570.1 654 51.5
BcaB02g06779 Brassica carinata HOM05D004564 ORTHO05D006106 1.2e-157 560.8 509 60.5
HanXRQChr10g0292821 Helianthus annuus HOM05D004564 ORTHO05D006106 4.6e-157 558.9 508 58.1
C05p04820 Brassica napus HOM05D004564 ORTHO05D006106 3.0e-156 556.2 512 59.8
EL10Ac1g01740 Beta vulgaris HOM05D004564 ORTHO05D006106 1.9e-155 553.5 514 55.8
Sp1g05350 Schrenkiella parvula HOM05D004564 ORTHO05D006106 4.3e-155 552.4 509 60.7
Carub.0001s0595 Capsella rubella HOM05D004564 ORTHO05D006106 9.6e-155 551.2 508 59.6
BraA10t42789Z Brassica rapa HOM05D004564 ORTHO05D006106 1.6e-154 550.4 512 59.0
SGA_v2.0_scaffold181G39711 Striga asiatica HOM05D004564 ORTHO05D006106 1.6e-154 550.4 606 54.3
A10p05220 Brassica napus HOM05D004564 ORTHO05D006106 2.1e-154 550.1 512 59.2
AT1G06590 Arabidopsis thaliana HOM05D004564 ORTHO05D006106 3.7e-154 549.3 509 59.5
AUR62034940 Chenopodium quinoa HOM05D004564 ORTHO05D006106 8.1e-154 548.1 514 56.0
Dinv03683 Davidia involucrata HOM05D004564 ORTHO05D006106 1.4e-153 547.4 483 60.7
THA.LOC104800817 Tarenaya hassleriana HOM05D004564 ORTHO05D006106 1.4e-153 547.4 509 60.3
AL1G16620 Arabidopsis lyrata HOM05D004564 ORTHO05D006106 1.8e-153 547.0 509 59.5
BolC5t29255H Brassica oleracea HOM05D004564 ORTHO05D006106 1.8e-153 547.0 512 59.0
CARHR006200 Cardamine hirsuta HOM05D004564 ORTHO05D006106 2.4e-153 546.6 509 59.7
Thhalv10006743m.g Eutrema salsugineum HOM05D004564 ORTHO05D006106 5.3e-153 545.4 509 59.5
Aa31LG1G7670 Aethionema arabicum HOM05D004564 ORTHO05D006106 1.2e-152 544.3 510 58.6
A09p66910 Brassica napus HOM05D004564 ORTHO05D006106 2.6e-152 543.1 509 58.9
CAN.G348.3 Capsicum annuum HOM05D004564 ORTHO05D006106 5.8e-152 542.0 506 58.1
ClCG07G010420 Citrullus lanatus HOM05D004564 ORTHO05D006106 2.2e-151 540.0 510 58.4
BraA09t42026Z Brassica rapa HOM05D004564 ORTHO05D006106 4.2e-150 535.8 517 58.0
ECA247G1853 Erigeron canadensis HOM05D004564 ORTHO05D006106 9.3e-150 534.6 514 55.3
Lsat_1_v5_gn_9_29980 Lactuca sativa HOM05D004564 ORTHO05D006106 1.3e-146 524.2 514 56.0
Hund26665 Selenicereus undatus HOM05D004564 ORTHO05D006106 5.0e-143 512.3 608 48.7
C08p51140 Brassica napus HOM05D004564 ORTHO05D006106 4.2e-142 509.2 516 56.2
BolC8t52640H Brassica oleracea HOM05D004564 ORTHO05D006106 4.2e-142 509.2 516 56.2
Psat2g017120 Pisum sativum HOM05D004564 ORTHO05D006106 1.6e-141 507.3 421 60.3
Nitab4.5_0004346g0010 Nicotiana tabacum HOM05D004564 ORTHO05D006106 1.4e-137 494.2 506 54.2
BcaNung07074 Brassica carinata HOM05D004564 ORTHO05D006106 5.3e-137 492.3 433 62.1
Ah.05g168440 Amaranthus hybridus HOM05D004564 ORTHO05D006106 5.9e-136 488.8 492 57.3
AUR62022316 Chenopodium quinoa HOM05D004564 ORTHO05D006106 3.6e-133 479.6 514 50.8
Nitab4.5_0000508g0020 Nicotiana tabacum HOM05D004564 ORTHO05D006106 7.2e-126 455.3 549 49.5
FAN02G2671 Fragaria x ananassa HOM05D004564 ORTHO05D006106 6.1e-125 452.2 462 54.5
unitig_37.g12587 Utricularia gibba HOM05D004564 ORTHO05D006106 3.6e-117 426.4 551 46.6
MBI18_g13604_MAGBIO Magnolia biondii HOM05D004564 ORTHO05D006106 4.8e-114 416.0 311 74.3
Pp3c3_33140 Physcomitrium patens HOM05D004564 ORTHO05D006106 1.4e-113 414.5 547 45.5
Cfa023356 Carpinus fangiana HOM05D004564 ORTHO05D006106 4.1e-113 412.9 565 48.3
SHI30099 Sapria himalayana HOM05D004564 ORTHO05D006106 1.2e-112 411.4 614 40.7
Sed0025117 Sechium edule HOM05D004564 ORTHO05D006106 1.0e-111 408.3 397 55.7
Lalb_Chr10g0106581 Lupinus albus HOM05D004564 ORTHO05D006106 5.0e-103 379.4 293 68.3
Oeu022916.1 Olea europaea HOM05D004564 ORTHO05D006106 2.1e-101 374.0 769 35.0
SMO174G0184 Selaginella moellendorffii HOM05D004564 ORTHO05D006106 8.0e-101 372.1 511 43.4
Peaxi162Scf00922g00319 Petunia axillaris HOM05D004564 ORTHO05D006106 5.7e-99 365.9 371 54.4
SalBow1G3587 Salvia bowleyana HOM05D004564 ORTHO05D006106 8.3e-98 362.1 362 56.1
AagrBONN_evm.TU.Sc2ySwM_228.5505 Anthoceros agrestis HOM05D004564 ORTHO05D006106 3.0e-92 343.6 559 39.2
SEGI_14916 Sequoiadendron giganteum HOM05D004564 ORTHO05D006106 2.9e-90 337.0 271 64.6
Mapoly0007s0190 Marchantia polymorpha HOM05D004564 ORTHO05D006106 1.5e-86 324.7 557 37.7
CBR_g44342 Chara braunii HOM05D000019 ORTHO05D000353 1.7e-82 311.2 538 38.5
GSVIVG01013077001 Vitis vinifera HOM05D004564 ORTHO05D006106 3.5e-80 303.5 235 69.4
CAN.G3149.1 Capsicum annuum HOM05D004564 ORTHO05D006106 7.5e-75 285.8 228 64.5
MELO3C016147.2 Cucumis melo HOM05D004564 ORTHO05D006106 1.0e-63 248.8 279 49.8
HPP92_001867 Vanilla planifolia HOM05D004564 ORTHO05D006106 2.3e-63 247.7 558 34.9
MD17G1134700 Malus domestica HOM05D004564 ORTHO05D006106 2.5e-62 244.2 276 53.6
Glyma.02G284500 Glycine max HOM05D004564 ORTHO05D006106 3.6e-61 240.4 210 68.1
Lalb_Chr10g0106571 Lupinus albus HOM05D004564 ORTHO05D006106 2.4e-60 237.7 219 54.3
QL93p2016_0008 Quercus lobata HOM05D004564 ORTHO05D006106 9.3e-57 225.7 233 54.1
ATR0598G245 Amborella trichopoda HOM05D004564 ORTHO05D006106 4.6e-40 170.2 105 88.6
CDE02G3007 Ceratophyllum demersum HOM05D004564 ORTHO05D006106 2.1e-37 161.4 146 54.8
HPP92_001899 Vanilla planifolia HOM05D004564 ORTHO05D006106 1.1e-36 159.1 113 69.9
Peaxi162Scf00922g00318 Petunia axillaris HOM05D004564 ORTHO05D006106 1.1e-33 149.1 118 61.0
ATR0820G167 Amborella trichopoda HOM05D004564 ORTHO05D006106 2.1e-32 144.8 97 81.4
TAR626G0994 Trochodendron aralioides HOM05D004564 ORTHO05D006106 1.9e-30 138.3 95 71.6
BcaNung07000 Brassica carinata HOM05D004564 ORTHO05D006106 3.6e-24 117.5 120 50.0
Rhsim02G0232100 Rhododendron simsii HOM05D000252 ORTHO05D000307 6.9e-20 103.2 161 42.2
Psat2g017160 Pisum sativum HOM05D004564 ORTHO05D006106 1.0e-15 89.4 85 56.5
Rhsim12G0011200 Rhododendron simsii HOM05D004564 ORTHO05D000827 8.8e-15 86.3 100 52.0
SEGI_33722 Sequoiadendron giganteum HOM05D004564 ORTHO05D006106 5.3e-12 77.0 114 43.9
SEGI_30840 Sequoiadendron giganteum HOM05D004564 ORTHO05D006106 2.6e-11 74.7 114 39.5
TPR.G10922 Trifolium pratense HOM05D004564 ORTHO05D006106 3.4e-11 74.3 85 48.2
Rhsim12G0011600 Rhododendron simsii HOM05D004564 ORTHO05D000827 2.9e-10 71.2 66 59.1
Rhsim12G0011100 Rhododendron simsii HOM05D004564 ORTHO05D006106 3.8e-10 70.9 68 48.5
Rhsim12G0011500 Rhododendron simsii HOM05D004564 ORTHO05D006106 3.2e-09 67.8 67 47.8
Zm00001eb370760 Zea mays HOM05D004564 ORTHO05D006106 3.2e-09 67.8 65 50.8
arahy.Tifrunner.gnm1.ann1.RHC2N4 Arachis hypogaea HOM05D000056 ORTHO05D006106 2.6e-06 58.2 61 55.7
Cre01.g034650 Chlamydomonas reinhardtii HOM05D004564 ORTHO05D006106 9.7e-06 56.2 217 26.3


User provided reference genes

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