Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0763G132 Amborella trichopoda HOM05D006750 ORTHO05D008426 7.6e-97 357.1 168 100.0
Nn7g38126 Nelumbo nucifera HOM05D006750 ORTHO05D008426 3.5e-33 145.6 152 48.0
Cc09_g06280 Coffea canephora HOM05D006750 ORTHO05D008426 1.1e-31 140.6 156 47.4
Nitab4.5_0003773g0080 Nicotiana tabacum HOM05D006750 ORTHO05D008426 3.2e-31 139.0 158 46.2
Prupe.4G110300 Prunus persica HOM05D006750 ORTHO05D008426 3.2e-31 139.0 138 45.7
Ciclev10016972m.g Citrus clementina HOM05D006750 ORTHO05D008426 4.2e-31 138.7 147 46.3
Manes.11G104340 Manihot esculenta HOM05D006750 ORTHO05D008426 4.2e-31 138.7 141 48.9
CAN.G1222.19 Capsicum annuum HOM05D006750 ORTHO05D008426 2.1e-30 136.3 158 44.9
HanXRQChr07g0189661 Helianthus annuus HOM05D006750 ORTHO05D008426 2.1e-30 136.3 141 48.9
Potri.012G120220 Populus trichocarpa HOM05D006750 ORTHO05D008426 2.1e-30 136.3 139 48.2
MD05G1254400 Malus domestica HOM05D006750 ORTHO05D008426 2.7e-30 136.0 136 44.9
vmacro03507 Vaccinium macrocarpon HOM05D006750 ORTHO05D008426 2.7e-30 136.0 110 57.3
Solyc02g069070.3 Solanum lycopersicum HOM05D006750 ORTHO05D008426 4.7e-30 135.2 158 44.9
CsaV3_1G046580 Cucumis sativus L. HOM05D006750 ORTHO05D008426 6.1e-30 134.8 138 49.3
MD10G1234600 Malus domestica HOM05D006750 ORTHO05D008426 6.1e-30 134.8 138 47.1
Nitab4.5_0002056g0050 Nicotiana tabacum HOM05D006750 ORTHO05D008426 6.1e-30 134.8 155 45.2
Potri.012G120100 Populus trichocarpa HOM05D006750 ORTHO05D008426 6.1e-30 134.8 139 47.5
MELO3C021769.2 Cucumis melo HOM05D006750 ORTHO05D008426 8.0e-30 134.4 138 49.3
SalBow8G0594 Salvia bowleyana HOM05D006750 ORTHO05D008426 8.0e-30 134.4 160 44.4
Thecc.06G141200 Theobroma cacao HOM05D006750 ORTHO05D008426 8.0e-30 134.4 106 58.5
SalBow8G2736 Salvia bowleyana HOM05D006750 ORTHO05D008426 1.0e-29 134.0 160 44.4
Atru.chr12.2220 Acer truncatum HOM05D006750 ORTHO05D008426 1.4e-29 133.7 141 47.5
COL.COLO4_30981 Corchorus olitorius HOM05D006750 ORTHO05D008426 1.4e-29 133.7 103 58.3
Thecc.06G140200 Theobroma cacao HOM05D006750 ORTHO05D008426 1.4e-29 133.7 106 58.5
SGA_v2.0_scaffold298G47680 Striga asiatica HOM05D006750 ORTHO05D008426 1.8e-29 133.3 162 45.7
ClCG01G009300 Citrullus lanatus HOM05D006750 ORTHO05D008426 3.0e-29 132.5 135 49.6
FvH4_3g12150 Fragaria vesca HOM05D006750 ORTHO05D008426 3.0e-29 132.5 139 46.8
FAN16G3293 Fragaria x ananassa HOM05D006750 ORTHO05D008426 3.0e-29 132.5 139 46.8
Gorai.009G437900 Gossypium raimondii HOM05D006750 ORTHO05D008426 5.2e-29 131.7 160 43.8
TAR627G0115 Trochodendron aralioides HOM05D006750 ORTHO05D008426 5.2e-29 131.7 104 59.6
RcHm_v2.0_Chr5g0019891 Rosa chinensis HOM05D006750 ORTHO05D008426 6.8e-29 131.3 139 46.8
CSS0027015 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 8.8e-29 131.0 136 48.5
TWI63G0081 Tripterygium wilfordii HOM05D006750 ORTHO05D008426 8.8e-29 131.0 108 52.8
Sabra15G0136900 Salix brachista HOM05D006750 ORTHO05D008426 1.2e-28 130.6 141 46.8
Sed0026407 Sechium edule HOM05D006750 ORTHO05D008426 1.2e-28 130.6 159 43.4
BcaB02g09122 Brassica carinata HOM05D006750 ORTHO05D008426 1.5e-28 130.2 155 44.5
CANSAT21G0613 Cannabis sativa HOM05D006750 ORTHO05D008426 1.5e-28 130.2 139 48.2
FAN25G1681 Fragaria x ananassa HOM05D006750 ORTHO05D008426 1.5e-28 130.2 139 46.0
THA.LOC104824253 Tarenaya hassleriana HOM05D006750 ORTHO05D008426 1.5e-28 130.2 138 46.4
AL4G36810 Arabidopsis lyrata HOM05D006750 ORTHO05D008426 2.0e-28 129.8 139 45.3
Ca_21154_v3 Cicer arietinum L. HOM05D006750 ORTHO05D008426 2.0e-28 129.8 137 48.2
HPP92_004186 Vanilla planifolia HOM05D006750 ORTHO05D008426 2.0e-28 129.8 163 42.9
Aqoxy1G01469 Aquilegia oxysepala HOM05D006750 ORTHO05D008426 2.6e-28 129.4 107 56.1
Carub.0004s2150 Capsella rubella HOM05D006750 ORTHO05D008426 2.6e-28 129.4 142 44.4
Gohir.A04G017000 Gossypium hirsutum HOM05D006750 ORTHO05D008426 2.6e-28 129.4 163 42.9
Gohir.D05G369200 Gossypium hirsutum HOM05D006750 ORTHO05D008426 2.6e-28 129.4 160 43.1
Lj4g0008374 Lotus japonicus HOM05D006750 ORTHO05D008426 4.4e-28 128.6 135 49.6
Aa31LG5G20440 Aethionema arabicum HOM05D004294 ORTHO05D004899 5.7e-28 128.3 115 49.6
AT2G39440 Arabidopsis thaliana HOM05D006750 ORTHO05D008426 7.5e-28 127.9 141 44.0
Sp4g21740 Schrenkiella parvula HOM05D006750 ORTHO05D008426 7.5e-28 127.9 142 43.7
Duzib235G0570 Durio zibethinus HOM05D006750 ORTHO05D008426 9.8e-28 127.5 153 45.8
RhsimUnG0232200 Rhododendron simsii HOM05D006750 ORTHO05D008426 9.8e-28 127.5 112 51.8
Actinidia22388 Actinidia chinensis HOM05D006750 ORTHO05D008426 1.3e-27 127.1 162 44.4
Migut.M01971 Erythranthe guttata HOM05D006750 ORTHO05D008426 1.3e-27 127.1 160 43.8
A05p06970 Brassica napus HOM05D006750 ORTHO05D008426 1.7e-27 126.7 151 43.7
BolC4t22432H Brassica oleracea HOM05D006750 ORTHO05D008426 2.2e-27 126.3 146 44.5
Cfa000723 Carpinus fangiana HOM05D006750 ORTHO05D008426 2.2e-27 126.3 113 54.0
Psat0s3953g0080 Pisum sativum HOM05D006750 ORTHO05D008426 2.2e-27 126.3 138 46.4
BcaC02g11618 Brassica carinata HOM05D006750 ORTHO05D008426 2.8e-27 125.9 146 44.5
C04p13120 Brassica napus HOM05D006750 ORTHO05D008426 2.8e-27 125.9 146 44.5
CiPaw.10G065100 Carya illinoinensis HOM05D006750 ORTHO05D008426 2.8e-27 125.9 140 46.4
VMungo1215G0360 Vigna mungo HOM05D006750 ORTHO05D008426 2.8e-27 125.9 144 45.8
unitig_748.g7497 Utricularia gibba HOM05D006750 ORTHO05D008426 3.7e-27 125.6 137 46.0
C04p08300 Brassica napus HOM05D006750 ORTHO05D008426 6.3e-27 124.8 146 44.5
Os02g0168900 Oryza sativa ssp. japonica HOM05D006750 ORTHO05D008426 6.3e-27 124.8 102 57.8
QL11p018076 Quercus lobata HOM05D006750 ORTHO05D008426 6.3e-27 124.8 99 57.6
BraA05t19661Z Brassica rapa HOM05D006750 ORTHO05D008426 8.3e-27 124.4 146 43.8
GSVIVG01012094001 Vitis vinifera HOM05D006750 ORTHO05D008426 8.3e-27 124.4 163 39.9
Eucgr.D01041 Eucalyptus grandis HOM05D006750 ORTHO05D008426 1.1e-26 124.0 115 49.6
Thhalv10017350m.g Eutrema salsugineum HOM05D006750 ORTHO05D008426 1.1e-26 124.0 141 44.0
Glyma.02G206800 Glycine max HOM05D006750 ORTHO05D008426 1.1e-26 124.0 145 45.5
Oeu052673.2 Olea europaea HOM05D006750 ORTHO05D008426 1.1e-26 124.0 138 50.7
CARHR134300 Cardamine hirsuta HOM05D006750 ORTHO05D008426 1.4e-26 123.6 141 42.6
BcaC02g12068 Brassica carinata HOM05D006750 ORTHO05D008426 1.8e-26 123.2 146 43.8
Hma1.2p1_0040F.1_g025070 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 2.4e-26 122.9 124 49.2
PGR142G2582 Punica granatum HOM05D006750 ORTHO05D008426 3.1e-26 122.5 106 51.9
Sp4g08180 Schrenkiella parvula HOM05D006750 ORTHO05D008426 3.1e-26 122.5 147 42.2
ECA246G4127 Erigeron canadensis HOM05D006750 ORTHO05D008426 4.1e-26 122.1 105 52.4
Haze_06026 Corylus avellana HOM05D006750 ORTHO05D008426 5.4e-26 121.7 127 47.2
Haze_06024 Corylus avellana HOM05D006750 ORTHO05D008426 2.0e-25 119.8 127 46.5
MSTRG.22268 Avicennia marina HOM05D006750 ORTHO05D008426 2.7e-25 119.4 149 42.3
Dinv11873 Davidia involucrata HOM05D006750 ORTHO05D008426 3.5e-25 119.0 121 48.8
Lsat_1_v5_gn_5_36321 Lactuca sativa HOM05D006750 ORTHO05D008426 3.5e-25 119.0 143 39.9
DCAR_004323 Daucus carota HOM05D006750 ORTHO05D008426 7.7e-25 117.9 92 57.6
PSO541G1844 Papaver somniferum HOM05D006750 ORTHO05D008426 7.7e-25 117.9 153 41.8
Phvul.003G153500 Phaseolus vulgaris HOM05D006750 ORTHO05D008426 7.7e-25 117.9 144 43.1
TPR.G24866 Trifolium pratense HOM05D006750 ORTHO05D008426 7.7e-25 117.9 151 42.4
CSS0019703 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 2.2e-24 116.3 123 48.0
Hma1.2p1_0040F.1_g025080 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 2.2e-24 116.3 93 58.1
CDE06G2778 Ceratophyllum demersum HOM05D006750 ORTHO05D008426 5.0e-24 115.2 125 46.4
Lj1A1143T38 Lonicera japonica HOM05D006750 ORTHO05D008426 5.0e-24 115.2 147 41.5
PSO675G8070 Papaver somniferum HOM05D006750 ORTHO05D008426 1.5e-23 113.6 101 53.5
Lalb_Chr02g0152091 Lupinus albus HOM05D006750 ORTHO05D008426 1.6e-22 110.2 147 42.2
AUR62007362 Chenopodium quinoa HOM05D006750 ORTHO05D008426 4.7e-22 108.6 113 46.9
EL10Ac2g02809 Beta vulgaris HOM05D006750 ORTHO05D008426 1.8e-21 106.7 145 40.7
SMO367G1186 Selaginella moellendorffii HOM05D006750 ORTHO05D008426 8.8e-21 104.4 103 43.7
AUR62018626 Chenopodium quinoa HOM05D006750 ORTHO05D008426 1.5e-20 103.6 113 46.0
arahy.Tifrunner.gnm1.ann1.8322W6 Arachis hypogaea HOM05D006750 ORTHO05D008426 2.6e-20 102.8 151 37.1
arahy.Tifrunner.gnm1.ann1.RPZE8L Arachis hypogaea HOM05D006750 ORTHO05D008426 2.6e-20 102.8 151 37.1
AagrBONN_evm.TU.Sc2ySwM_344.3424 Anthoceros agrestis HOM05D006750 ORTHO05D008426 1.1e-18 97.4 112 42.9
CBR_g39953 Chara braunii HOM05D006750 ORTHO05D008426 7.0e-18 94.7 134 35.1
Pp3c2_9480 Physcomitrium patens HOM05D006750 ORTHO05D008426 3.5e-17 92.4 122 39.3
Sc05g0005750 Simmondsia chinensis HOM05D006750 ORTHO05D008426 7.7e-17 91.3 127 39.4
Mapoly0007s0049 Marchantia polymorpha HOM05D006750 ORTHO05D008426 1.0e-16 90.9 160 33.8
Sopen02g018170 Solanum pennellii HOM05D006750 ORTHO05D008426 2.1e-14 83.2 69 50.7
Ah.12g055560 Amaranthus hybridus HOM05D002269 ORTHO05D002421 2.8e-14 82.8 149 36.2
Zm00001eb233030 Zea mays HOM05D006750 ORTHO05D008426 8.9e-13 77.8 119 34.5
Peaxi162Scf00149g00921 Petunia axillaris HOM05D006750 ORTHO05D008426 2.6e-12 76.3 84 44.0
Cre08.g378100 Chlamydomonas reinhardtii HOM05D006750 ORTHO05D008426 9.8e-12 74.3 109 36.7
Hund11169 Selenicereus undatus HOM05D006750 ORTHO05D008426 4.6e-09 65.5 71 45.1
SHI31544 Sapria himalayana HOM05D006750 ORTHO05D008426 5.6e-07 58.5 41 56.1


User provided reference genes

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