Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0763G104 Amborella trichopoda HOM05D005477 ORTHO05D006721 3.1e-44 181.4 91 100.0
MBI18_g35539_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 2.3e-31 138.7 75 86.7
Dinv01135 Davidia involucrata HOM05D005477 ORTHO05D006721 1.1e-30 136.3 75 84.0
MBI18_g21701_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 1.9e-30 135.6 75 85.3
Dinv17881 Davidia involucrata HOM05D005477 ORTHO05D006721 2.5e-30 135.2 75 82.7
vmacro03568 Vaccinium macrocarpon HOM05D005477 ORTHO05D006721 2.5e-30 135.2 75 84.0
MBI18_g18219_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 3.3e-30 134.8 75 84.0
Aqoxy1G01389 Aquilegia oxysepala HOM05D005477 ORTHO05D006721 4.3e-30 134.4 75 84.0
CSS0024293 Camellia sinensis var. sinensis HOM05D005477 ORTHO05D006721 4.3e-30 134.4 75 81.3
Os07g0498300 Oryza sativa ssp. japonica HOM05D005477 ORTHO05D006721 4.3e-30 134.4 75 80.0
HPP92_026455 Vanilla planifolia HOM05D005477 ORTHO05D006721 4.3e-30 134.4 77 81.8
HanXRQChr09g0257861 Helianthus annuus HOM05D005477 ORTHO05D006721 5.6e-30 134.0 75 81.3
Ah.08g212300 Amaranthus hybridus HOM05D003310 ORTHO05D006721 7.4e-30 133.7 84 75.0
Sc24g0002840 Simmondsia chinensis HOM05D005477 ORTHO05D006721 7.4e-30 133.7 90 74.4
Cpa.g.sc2054.1 Carica papaya HOM05D005477 ORTHO05D006721 9.6e-30 133.3 78 80.8
HanXRQChr14g0439061 Helianthus annuus HOM05D005477 ORTHO05D006721 1.3e-29 132.9 75 81.3
Nn7g38416 Nelumbo nucifera HOM05D005477 ORTHO05D006721 1.3e-29 132.9 75 81.3
Ah.15g091860 Amaranthus hybridus HOM05D005477 ORTHO05D006721 2.8e-29 131.7 75 82.7
EL10Ac7g17253 Beta vulgaris HOM05D005477 ORTHO05D006721 3.7e-29 131.3 82 75.6
FAN25G0727 Fragaria x ananassa HOM05D005477 ORTHO05D006721 3.7e-29 131.3 75 81.3
Lsat_1_v5_gn_2_59701 Lactuca sativa HOM05D005477 ORTHO05D006721 3.7e-29 131.3 75 80.0
Zm00001eb321910 Zea mays HOM05D005477 ORTHO05D006721 3.7e-29 131.3 81 72.8
A03p52320 Brassica napus HOM05D005477 ORTHO05D006721 4.8e-29 131.0 86 69.8
CsaV3_6G053130 Cucumis sativus L. HOM05D005477 ORTHO05D006721 4.8e-29 131.0 88 72.7
FvH4_3g13280 Fragaria vesca HOM05D005477 ORTHO05D006721 4.8e-29 131.0 75 81.3
FAN11G1325 Fragaria x ananassa HOM05D005477 ORTHO05D006721 4.8e-29 131.0 75 81.3
FAN16G3377 Fragaria x ananassa HOM05D005477 ORTHO05D006721 4.8e-29 131.0 75 81.3
FAN21G3865 Fragaria x ananassa HOM05D005477 ORTHO05D006721 4.8e-29 131.0 75 81.3
TAR624G0209 Trochodendron aralioides HOM05D005477 ORTHO05D006721 4.8e-29 131.0 75 81.3
ClCG01G025920 Citrullus lanatus HOM05D005477 ORTHO05D006721 6.2e-29 130.6 75 81.3
Prupe.4G120200 Prunus persica HOM05D005477 ORTHO05D006721 8.2e-29 130.2 76 77.6
Zm00001eb105410 Zea mays HOM05D005477 ORTHO05D006721 1.1e-28 129.8 76 76.3
MELO3C006999.2 Cucumis melo HOM05D005477 ORTHO05D006721 1.4e-28 129.4 75 80.0
ECA238G4156 Erigeron canadensis HOM05D005477 ORTHO05D006721 1.4e-28 129.4 75 80.0
MD05G1243500 Malus domestica HOM05D005477 ORTHO05D006721 1.4e-28 129.4 76 76.3
Ciclev10017510m.g Citrus clementina HOM05D005477 ORTHO05D006721 1.8e-28 129.0 75 80.0
THA.LOC104812922 Tarenaya hassleriana HOM05D005477 ORTHO05D006721 1.8e-28 129.0 75 78.7
CANSAT35G0922 Cannabis sativa HOM05D005477 ORTHO05D006721 2.4e-28 128.6 75 78.7
MD10G1225400 Malus domestica HOM05D005477 ORTHO05D006721 2.4e-28 128.6 76 76.3
Oeu005613.1 Olea europaea HOM05D005477 ORTHO05D006721 2.4e-28 128.6 89 70.8
PSO675G9273 Papaver somniferum HOM05D005477 ORTHO05D006721 2.4e-28 128.6 75 77.3
RcHm_v2.0_Chr5g0021751 Rosa chinensis HOM05D005477 ORTHO05D006721 2.4e-28 128.6 75 78.7
THA.LOC104811905 Tarenaya hassleriana HOM05D005477 ORTHO05D006721 2.4e-28 128.6 75 77.3
Sed0007385 Sechium edule HOM05D005477 ORTHO05D006721 3.1e-28 128.3 75 80.0
Cc09_g04680 Coffea canephora HOM05D005477 ORTHO05D006721 4.0e-28 127.9 75 76.0
CARHR226980 Cardamine hirsuta HOM05D005477 ORTHO05D006721 5.3e-28 127.5 75 77.3
COL.COLO4_25033 Corchorus olitorius HOM05D005477 ORTHO05D006721 5.3e-28 127.5 75 78.7
DCAR_004357 Daucus carota HOM05D005477 ORTHO05D006721 5.3e-28 127.5 75 77.3
Thecc.02G001600 Theobroma cacao HOM05D005477 ORTHO05D006721 5.3e-28 127.5 75 78.7
AUR62040995 Chenopodium quinoa HOM05D005477 ORTHO05D006721 6.9e-28 127.1 76 77.6
AUR62042809 Chenopodium quinoa HOM05D005477 ORTHO05D006721 6.9e-28 127.1 76 77.6
Atru.chr10.245 Acer truncatum HOM05D005477 ORTHO05D006721 9.0e-28 126.7 75 77.3
arahy.Tifrunner.gnm1.ann1.3VSL80 Arachis hypogaea HOM05D005477 ORTHO05D006721 9.0e-28 126.7 76 75.0
arahy.Tifrunner.gnm1.ann1.Z3SLP7 Arachis hypogaea HOM05D005477 ORTHO05D006721 9.0e-28 126.7 76 75.0
CiPaw.09G140100 Carya illinoinensis HOM05D005477 ORTHO05D006721 9.0e-28 126.7 75 77.3
DCAR_001258 Daucus carota HOM05D005477 ORTHO05D006721 9.0e-28 126.7 78 74.4
Eucgr.E04324 Eucalyptus grandis HOM05D005477 ORTHO05D006721 9.0e-28 126.7 75 77.3
BraA03t14308Z Brassica rapa HOM05D005477 ORTHO05D006721 1.2e-27 126.3 79 72.2
QL11p010970 Quercus lobata HOM05D005477 ORTHO05D006721 1.2e-27 126.3 96 64.6
Aa31LG6G2560 Aethionema arabicum HOM05D005477 ORTHO05D006721 1.5e-27 125.9 82 70.7
Gohir.A12G050600 Gossypium hirsutum HOM05D005477 ORTHO05D006721 1.5e-27 125.9 75 78.7
Gohir.A12G050700 Gossypium hirsutum HOM05D005477 ORTHO05D006721 1.5e-27 125.9 75 78.7
Gohir.D12G048900 Gossypium hirsutum HOM05D005477 ORTHO05D006721 1.5e-27 125.9 75 78.7
Gohir.D12G049000 Gossypium hirsutum HOM05D005477 ORTHO05D006721 1.5e-27 125.9 75 78.7
Gorai.008G051800 Gossypium raimondii HOM05D005477 ORTHO05D006721 1.5e-27 125.9 75 78.7
C03p82800 Brassica napus HOM05D005477 ORTHO05D006721 2.0e-27 125.6 83 68.7
CiPaw.10G107900 Carya illinoinensis HOM05D005477 ORTHO05D006721 2.0e-27 125.6 75 77.3
PGR042G1348 Punica granatum HOM05D005477 ORTHO05D006721 2.0e-27 125.6 75 76.0
Hund08547 Selenicereus undatus HOM05D005477 ORTHO05D006721 2.0e-27 125.6 76 76.3
Gorai.008G051900 Gossypium raimondii HOM05D005477 ORTHO05D006721 2.6e-27 125.2 75 77.3
Manes.03G072100 Manihot esculenta HOM05D005477 ORTHO05D006721 2.6e-27 125.2 75 76.0
Oeu046914.1 Olea europaea HOM05D005477 ORTHO05D006721 2.6e-27 125.2 79 72.2
MSTRG.16378 Avicennia marina HOM05D005477 ORTHO05D006721 3.4e-27 124.8 75 76.0
A08p14650 Brassica napus HOM05D005477 ORTHO05D006721 3.4e-27 124.8 83 68.7
BolC7t45576H Brassica oleracea HOM05D005477 ORTHO05D006721 3.4e-27 124.8 79 70.9
BraA08t33453Z Brassica rapa HOM05D005477 ORTHO05D006721 3.4e-27 124.8 83 68.7
Cfa001157 Carpinus fangiana HOM05D005477 ORTHO05D006721 3.4e-27 124.8 84 71.4
Haze_05194 Corylus avellana HOM05D005477 ORTHO05D006721 3.4e-27 124.8 84 71.4
Thhalv10026700m.g Eutrema salsugineum HOM05D005477 ORTHO05D006721 3.4e-27 124.8 75 74.7
Sabra01G0054000 Salix brachista HOM05D005477 ORTHO05D006721 3.4e-27 124.8 82 68.3
DCAR_016635 Daucus carota HOM05D005477 ORTHO05D006721 4.5e-27 124.4 79 73.4
Psat7g087320 Pisum sativum HOM05D005477 ORTHO05D006721 5.8e-27 124.0 69 79.7
Sp7g18580 Schrenkiella parvula HOM05D005477 ORTHO05D006721 5.8e-27 124.0 75 74.7
AL7G33670 Arabidopsis lyrata HOM05D005477 ORTHO05D006721 7.6e-27 123.6 75 74.7
AT4G20150 Arabidopsis thaliana HOM05D005477 ORTHO05D006721 7.6e-27 123.6 75 74.7
Carub.0007s2098 Capsella rubella HOM05D005477 ORTHO05D006721 7.6e-27 123.6 75 74.7
BcaB03g11659 Brassica carinata HOM05D005477 ORTHO05D006721 1.0e-26 123.2 75 73.3
BcaC01g00657 Brassica carinata HOM05D005477 ORTHO05D006721 1.0e-26 123.2 75 73.3
BcaC06g30645 Brassica carinata HOM05D005477 ORTHO05D006721 1.0e-26 123.2 75 73.3
BolC3t20562H Brassica oleracea HOM05D005477 ORTHO05D006721 1.0e-26 123.2 75 73.3
Ca_18217_v3 Cicer arietinum L. HOM05D005477 ORTHO05D006721 1.0e-26 123.2 76 72.4
Potri.001G074901 Populus trichocarpa HOM05D005477 ORTHO05D006721 1.0e-26 123.2 75 73.3
BcaNung03709 Brassica carinata HOM05D005477 ORTHO05D006721 1.7e-26 122.5 75 73.3
A01p11900 Brassica napus HOM05D005477 ORTHO05D006721 1.7e-26 122.5 75 73.3
BraA01t01132Z Brassica rapa HOM05D005477 ORTHO05D006721 1.7e-26 122.5 75 73.3
C07p50750 Brassica napus HOM05D005477 ORTHO05D006721 2.2e-26 122.1 86 65.1
Nitab4.5_0001299g0020 Nicotiana tabacum HOM05D005477 ORTHO05D006721 2.2e-26 122.1 75 72.0
Phvul.002G187200 Phaseolus vulgaris HOM05D005477 ORTHO05D006721 2.2e-26 122.1 69 78.3
Sabra03G0113300 Salix brachista HOM05D005477 ORTHO05D006721 2.2e-26 122.1 75 73.3
Glyma.05G134900 Glycine max HOM05D005477 ORTHO05D006721 2.9e-26 121.7 69 76.8
Glyma.08G090100 Glycine max HOM05D005477 ORTHO05D006721 2.9e-26 121.7 69 76.8
Potri.003G156301 Populus trichocarpa HOM05D005477 ORTHO05D006721 2.9e-26 121.7 75 74.7
Medtr4g094792 Medicago truncatula HOM05D005477 ORTHO05D006721 3.8e-26 121.3 84 66.7
CDE12G0557 Ceratophyllum demersum HOM05D005477 ORTHO05D006721 4.9e-26 120.9 75 76.0
BcaNung03492 Brassica carinata HOM05D005477 ORTHO05D006721 8.4e-26 120.2 75 72.0
Nitab4.5_0004786g0020 Nicotiana tabacum HOM05D005477 ORTHO05D006721 8.4e-26 120.2 75 70.7
Peaxi162Scf00203g01320 Petunia axillaris HOM05D005477 ORTHO05D006721 1.1e-25 119.8 75 70.7
Sopen10g001220 Solanum pennellii HOM05D005477 ORTHO05D006721 1.1e-25 119.8 75 70.7
GSVIVG01010508001 Vitis vinifera HOM05D005477 ORTHO05D006721 1.1e-25 119.8 76 68.4
TPR.G27391 Trifolium pratense HOM05D005477 ORTHO05D006721 1.4e-25 119.4 76 69.7
unitig_748.g7487 Utricularia gibba HOM05D005477 ORTHO05D006721 1.4e-25 119.4 75 73.3
CiPaw.06G130100 Carya illinoinensis HOM05D005477 ORTHO05D006721 1.9e-25 119.0 78 71.8
SHI16868 Sapria himalayana HOM05D005477 ORTHO05D006721 2.5e-25 118.6 70 77.1
PGSC0003DMG400011262 Solanum tuberosum HOM05D005477 ORTHO05D006721 3.2e-25 118.2 75 69.3
Lj4g0025411 Lotus japonicus HOM05D005477 ORTHO05D006721 4.2e-25 117.9 76 68.4
Lalb_Chr13g0293041 Lupinus albus HOM05D005477 ORTHO05D006721 7.1e-25 117.1 76 65.8
CAN.G105.21 Capsicum annuum HOM05D005477 ORTHO05D006721 1.2e-24 116.3 82 63.4
Solyc10g005230.3 Solanum lycopersicum HOM05D005477 ORTHO05D006721 1.6e-24 115.9 69 73.9
Peaxi162Scf00700g00728 Petunia axillaris HOM05D005477 ORTHO05D006721 6.0e-24 114.0 75 66.7
Duzib132G0617 Durio zibethinus HOM05D005477 ORTHO05D006721 3.0e-23 111.7 75 66.7
Lalb_Chr07g0188151 Lupinus albus HOM05D005477 ORTHO05D006721 3.0e-23 111.7 76 65.8
Migut.M02030 Erythranthe guttata HOM05D005477 ORTHO05D006721 8.7e-23 110.2 69 75.4
PSO675G4749 Papaver somniferum HOM05D005477 ORTHO05D006721 8.7e-23 110.2 75 69.3
TWI38G0021 Tripterygium wilfordii HOM05D005477 ORTHO05D006721 2.2e-21 105.5 75 61.3
Lalb_Chr07g0188141 Lupinus albus HOM05D005477 ORTHO05D006721 1.2e-19 99.8 76 57.9
Pp3c1_24730 Physcomitrium patens HOM05D005477 ORTHO05D006721 2.6e-19 98.6 78 55.1
Mapoly0053s0096 Marchantia polymorpha HOM05D005477 ORTHO05D006721 1.7e-18 95.9 76 56.6
Pp3c14_13800 Physcomitrium patens HOM05D005477 ORTHO05D006721 1.7e-18 95.9 76 53.9
TWI15G0858 Tripterygium wilfordii HOM05D005477 ORTHO05D006721 1.7e-18 95.9 75 54.7
CBR_g39209 Chara braunii HOM05D005477 ORTHO05D006721 2.9e-18 95.1 76 55.3
AagrBONN_evm.TU.Sc2ySwM_362.2068 Anthoceros agrestis HOM05D005477 ORTHO05D006721 5.1e-15 84.3 75 45.3
Oeu039133.1 Olea europaea HOM05D005477 ORTHO05D006721 5.1e-15 84.3 50 72.0
MBI15_g47666_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 8.8e-15 83.6 96 55.2
SMO134G0137 Selaginella moellendorffii HOM05D005477 ORTHO05D006721 1.7e-13 79.3 83 44.6
MBI15_g35018_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 5.9e-11 70.9 37 89.2
GSVIVG01010076001 Vitis vinifera HOM05D005477 ORTHO05D006721 1.0e-10 70.1 45 66.7
MCO10G264 Micromonas commoda HOM05D005477 ORTHO05D006721 6.5e-10 67.4 65 43.1
Aa31LG9G8470 Aethionema arabicum HOM05D005477 ORTHO05D006721 1.4e-07 59.7 37 70.3


User provided reference genes

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