Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0763G093 Amborella trichopoda HOM05D000475 ORTHO05D000343 0.0e+00 1395.6 745 100.0
MBI18_g11478_MAGBIO Magnolia biondii HOM05D000475 ORTHO05D000343 2.2e-15 88.6 755 26.8
Dinv01945 Davidia involucrata HOM05D000475 ORTHO05D000343 5.5e-14 84.0 81 55.6
Actinidia22398 Actinidia chinensis HOM05D000475 ORTHO05D000343 1.2e-13 82.8 83 53.0
Lj3g0021085 Lotus japonicus HOM05D000475 ORTHO05D000343 2.7e-13 81.6 171 32.2
Nn7g38148 Nelumbo nucifera HOM05D000475 ORTHO05D000343 3.6e-13 81.3 142 40.8
Cfa000709 Carpinus fangiana HOM05D000475 ORTHO05D000343 4.6e-13 80.9 87 51.7
Haze_07820 Corylus avellana HOM05D006002 ORTHO05D007651 6.1e-13 80.5 107 45.8
Cc09_g06060 Coffea canephora HOM05D000475 ORTHO05D000343 1.8e-12 79.0 81 49.4
Lsat_1_v5_gn_2_63821 Lactuca sativa HOM05D000475 ORTHO05D000343 1.8e-12 79.0 106 40.6
Rhsim13G0133100 Rhododendron simsii HOM05D000475 ORTHO05D000343 1.8e-12 79.0 81 51.9
Lj2A15G77 Lonicera japonica HOM05D000475 ORTHO05D000343 2.3e-12 78.6 100 43.0
Aa31LG9G16080 Aethionema arabicum HOM05D000475 ORTHO05D000343 3.0e-12 78.2 81 53.1
Sopen02g017950 Solanum pennellii HOM05D004848 ORTHO05D006859 3.0e-12 78.2 81 49.4
PGSC0003DMG400025658 Solanum tuberosum HOM05D004848 ORTHO05D000343 3.0e-12 78.2 81 50.6
Dinv19592 Davidia involucrata HOM05D003670 ORTHO05D004767 5.1e-12 77.4 99 45.5
SalBow6G1617 Salvia bowleyana HOM05D000475 ORTHO05D000343 6.7e-12 77.0 81 46.9
SalBow8G5285 Salvia bowleyana HOM05D000475 ORTHO05D000343 6.7e-12 77.0 81 46.9
CSS0019999 Camellia sinensis var. sinensis HOM05D000475 ORTHO05D000343 8.8e-12 76.6 83 48.2
CiPaw.10G064600 Carya illinoinensis HOM05D000475 ORTHO05D000343 1.1e-11 76.3 95 49.5
GSVIVG01012068001 Vitis vinifera HOM05D004848 ORTHO05D006859 1.1e-11 76.3 109 43.1
Cfa022973 Carpinus fangiana HOM05D000475 ORTHO05D000343 1.5e-11 75.9 139 36.0
Medtr2g066940 Medicago truncatula HOM05D000475 ORTHO05D000343 1.5e-11 75.9 177 33.3
Medtr2g067150 Medicago truncatula HOM05D000475 ORTHO05D000343 1.5e-11 75.9 177 33.3
PSO541G4978 Papaver somniferum HOM05D064283 ORTHO05D050190 2.0e-11 75.5 120 38.3
TAR626G0180 Trochodendron aralioides HOM05D000475 ORTHO05D000343 2.0e-11 75.5 116 40.5
Ciclev10014264m.g Citrus clementina HOM05D000475 ORTHO05D000343 3.3e-11 74.7 81 50.6
Duzib235G1242 Durio zibethinus HOM05D000475 ORTHO05D000343 3.3e-11 74.7 85 50.6
Migut.M01982 Erythranthe guttata HOM05D000475 ORTHO05D000343 4.3e-11 74.3 83 45.8
Nitab4.5_0001288g0210 Nicotiana tabacum HOM05D004848 ORTHO05D000343 4.3e-11 74.3 81 48.1
Peaxi162Scf00149g00048 Petunia axillaris HOM05D004848 ORTHO05D000343 4.3e-11 74.3 81 48.1
Rhsim06G0242000 Rhododendron simsii HOM05D000475 ORTHO05D000343 4.3e-11 74.3 78 47.4
CAN.G149.32 Capsicum annuum HOM05D000475 ORTHO05D000343 7.4e-11 73.6 81 46.9
Nitab4.5_0007533g0020 Nicotiana tabacum HOM05D004848 ORTHO05D000343 9.7e-11 73.2 81 48.1
CAN.G358.73 Capsicum annuum HOM05D004848 ORTHO05D000343 2.2e-10 72.0 81 46.9
Potri.015G122300 Populus trichocarpa HOM05D000475 ORTHO05D000343 2.2e-10 72.0 81 46.9
HanXRQChr14g0447421 Helianthus annuus HOM05D000475 ORTHO05D000343 2.8e-10 71.6 80 47.5
PGR031G2344 Punica granatum HOM05D000475 ORTHO05D000343 2.8e-10 71.6 81 44.4
Glyma.20G019900 Glycine max HOM05D000475 ORTHO05D000343 4.8e-10 70.9 83 44.6
Gohir.A10G044700 Gossypium hirsutum HOM05D000475 ORTHO05D000343 4.8e-10 70.9 81 45.7
Lj4g0015823 Lotus japonicus HOM05D000475 ORTHO05D000343 4.8e-10 70.9 83 44.6
CiPaw.09G077100 Carya illinoinensis HOM05D000475 ORTHO05D000343 6.3e-10 70.5 195 32.8
Gohir.D10G045901 Gossypium hirsutum HOM05D000475 ORTHO05D000343 6.3e-10 70.5 81 45.7
Gorai.011G048800 Gossypium raimondii HOM05D000475 ORTHO05D000343 6.3e-10 70.5 81 45.7
Sed0010387 Sechium edule HOM05D000475 ORTHO05D025090 6.3e-10 70.5 99 43.4
vmacro03522 Vaccinium macrocarpon HOM05D000475 ORTHO05D000343 6.3e-10 70.5 81 49.4
Lsat_1_v5_gn_2_63840 Lactuca sativa HOM05D000475 ORTHO05D000343 8.2e-10 70.1 81 46.9
Aqoxy1G01448 Aquilegia oxysepala HOM05D000475 ORTHO05D000343 1.1e-09 69.7 81 49.4
Lalb_Chr05g0219681 Lupinus albus HOM05D000475 ORTHO05D000343 1.1e-09 69.7 211 28.9
AL4G31150 Arabidopsis lyrata HOM05D000475 ORTHO05D000343 1.4e-09 69.3 83 45.8
Dinv07925 Davidia involucrata HOM05D000475 ORTHO05D000343 1.4e-09 69.3 73 52.1
Duzib160G0326 Durio zibethinus HOM05D000475 ORTHO05D000343 1.4e-09 69.3 77 46.8
QL11p016442 Quercus lobata HOM05D000475 ORTHO05D000343 1.4e-09 69.3 81 46.9
Carub.0004s1682 Capsella rubella HOM05D000475 ORTHO05D000343 1.8e-09 68.9 132 37.9
COL.COLO4_32972 Corchorus olitorius HOM05D000475 ORTHO05D000343 2.4e-09 68.6 77 44.2
Thecc.05G246600 Theobroma cacao HOM05D000475 ORTHO05D000343 2.4e-09 68.6 81 42.0
Atru.chr10.535 Acer truncatum HOM05D000003 ORTHO05D000004 3.1e-09 68.2 86 46.5
Atru.chr10.538 Acer truncatum HOM05D000475 ORTHO05D000343 3.1e-09 68.2 86 46.5
AT2G35140 Arabidopsis thaliana HOM05D000475 ORTHO05D000343 3.1e-09 68.2 83 45.8
arahy.Tifrunner.gnm1.ann1.0LVW4F Arachis hypogaea HOM05D000475 ORTHO05D000343 3.1e-09 68.2 169 34.9
Sp4g17370 Schrenkiella parvula HOM05D000475 ORTHO05D000343 3.1e-09 68.2 114 40.4
arahy.Tifrunner.gnm1.ann1.K1436N Arachis hypogaea HOM05D000475 ORTHO05D000343 4.1e-09 67.8 168 33.3
BcaB02g09475 Brassica carinata HOM05D000475 ORTHO05D000343 4.1e-09 67.8 83 47.0
A05p10600 Brassica napus HOM05D000475 ORTHO05D000343 4.1e-09 67.8 83 47.0
C04p13700 Brassica napus HOM05D000475 ORTHO05D000343 4.1e-09 67.8 83 47.0
BolC4t22959H Brassica oleracea HOM05D000475 ORTHO05D000343 4.1e-09 67.8 83 47.0
ClCG01G009500 Citrullus lanatus HOM05D000475 ORTHO05D025090 4.1e-09 67.8 77 48.1
TPR.G20983 Trifolium pratense HOM05D000475 ORTHO05D000343 4.1e-09 67.8 196 28.6
Lj1C1145T6 Lonicera japonica HOM05D000475 ORTHO05D000343 5.3e-09 67.4 81 48.1
EL10Ac2g03276 Beta vulgaris HOM05D000475 ORTHO05D000343 6.9e-09 67.0 81 45.7
DCAR_004328 Daucus carota HOM05D000475 ORTHO05D000343 6.9e-09 67.0 81 45.7
BraA05t20000Z Brassica rapa HOM05D000475 ORTHO05D000343 9.1e-09 66.6 83 45.8
CBR_g21810 Chara braunii HOM05D000475 ORTHO05D000343 1.2e-08 66.2 104 41.3
CANSAT80G0596 Cannabis sativa HOM05D000475 ORTHO05D000343 1.5e-08 65.9 84 42.9
Sc24g0002710 Simmondsia chinensis HOM05D000475 ORTHO05D000343 2.0e-08 65.5 81 44.4
COL.COLO4_30994 Corchorus olitorius HOM05D000475 ORTHO05D000343 2.6e-08 65.1 87 43.7
Psat1g013720 Pisum sativum HOM05D000475 ORTHO05D000343 2.6e-08 65.1 202 30.7
Ah.08g219680 Amaranthus hybridus HOM05D000475 ORTHO05D000343 3.4e-08 64.7 114 38.6
Ca_18761_v3 Cicer arietinum L. HOM05D000475 ORTHO05D000343 3.4e-08 64.7 83 42.2
Phvul.002G097900 Phaseolus vulgaris HOM05D000475 ORTHO05D000343 3.4e-08 64.7 86 39.5
Hund12434 Selenicereus undatus HOM05D000475 ORTHO05D000343 3.4e-08 64.7 89 41.6
VMungo0251G2827 Vigna mungo HOM05D000475 ORTHO05D000343 3.4e-08 64.7 83 42.2
CDE04G0323 Ceratophyllum demersum HOM05D000475 ORTHO05D000343 4.5e-08 64.3 80 43.8
Lalb_Chr25g0284711 Lupinus albus HOM05D000475 ORTHO05D000343 5.9e-08 63.9 161 31.1
THA.LOC104814360 Tarenaya hassleriana HOM05D000475 ORTHO05D000343 5.9e-08 63.9 137 33.6
Zm00001eb281740 Zea mays HOM05D000475 ORTHO05D000343 5.9e-08 63.9 87 41.4
arahy.Tifrunner.gnm1.ann1.2Y78QC Arachis hypogaea HOM05D000475 ORTHO05D000343 1.3e-07 62.8 142 31.7
Prupe.4G112100 Prunus persica HOM05D000475 ORTHO05D000343 1.3e-07 62.8 156 31.4
arahy.Tifrunner.gnm1.ann1.MJFL2P Arachis hypogaea HOM05D000475 ORTHO05D000343 1.7e-07 62.4 83 39.8
SEGI_22052 Sequoiadendron giganteum HOM05D000475 ORTHO05D000343 1.7e-07 62.4 105 34.3
Eucgr.F04456 Eucalyptus grandis HOM05D000475 ORTHO05D000343 3.8e-07 61.2 111 35.1
MBI02_g35830_MAGBIO Magnolia biondii HOM05D000475 ORTHO05D000343 3.8e-07 61.2 70 52.9
Dinv04176 Davidia involucrata HOM05D000475 ORTHO05D000343 5.0e-07 60.8 114 37.7
Psat7g130240 Pisum sativum HOM05D000475 ORTHO05D000343 6.5e-07 60.5 121 32.2
MD10G1232100 Malus domestica HOM05D000475 ORTHO05D000343 8.5e-07 60.1 155 30.3
Medtr4g084080 Medicago truncatula HOM05D000475 ORTHO05D000343 1.1e-06 59.7 125 34.4
MELO3C021747.2 Cucumis melo HOM05D000475 ORTHO05D025090 1.4e-06 59.3 71 46.5
MD05G1251600 Malus domestica HOM05D000475 ORTHO05D000343 1.4e-06 59.3 81 39.5
Sed0013047 Sechium edule HOM05D000475 ORTHO05D000343 1.4e-06 59.3 77 45.5
TPR.G33850 Trifolium pratense HOM05D000475 ORTHO05D000343 1.4e-06 59.3 69 44.9
CDE07G0312 Ceratophyllum demersum HOM05D000475 ORTHO05D000343 1.9e-06 58.9 80 41.2
Hund18900 Selenicereus undatus HOM05D000475 ORTHO05D000343 1.9e-06 58.9 135 34.8
SEGI_25178 Sequoiadendron giganteum HOM05D000475 ORTHO05D000343 1.9e-06 58.9 79 41.8
Solyc06g005570.4 Solanum lycopersicum HOM05D000475 ORTHO05D000343 1.9e-06 58.9 77 46.8
Sopen06g001530 Solanum pennellii HOM05D000475 ORTHO05D000343 1.9e-06 58.9 77 46.8
ATR0559G058 Amborella trichopoda HOM05D000475 ORTHO05D000343 2.5e-06 58.5 108 40.7
Nitab4.5_0003943g0010 Nicotiana tabacum HOM05D000475 ORTHO05D000343 2.5e-06 58.5 77 45.5
Cfa011514 Carpinus fangiana HOM05D000475 ORTHO05D000343 3.2e-06 58.2 101 37.6
ECA236G2884 Erigeron canadensis HOM05D000475 ORTHO05D000343 3.2e-06 58.2 264 27.7
ECA238G3920 Erigeron canadensis HOM05D000475 ORTHO05D000343 3.2e-06 58.2 79 39.2
Nitab4.5_0000272g0100 Nicotiana tabacum HOM05D000475 ORTHO05D000343 3.2e-06 58.2 118 37.3
TWI38G1149 Tripterygium wilfordii HOM05D000475 ORTHO05D000343 4.2e-06 57.8 81 42.0
CsaV3_1G046280 Cucumis sativus L. HOM05D000475 ORTHO05D025090 7.2e-06 57.0 71 45.1
Peaxi162Scf00216g00027 Petunia axillaris HOM05D000475 ORTHO05D000343 7.2e-06 57.0 77 45.5
RcHm_v2.0_Chr5g0020111 Rosa chinensis HOM05D000475 ORTHO05D000343 7.2e-06 57.0 81 42.0
CAN.G632.5 Capsicum annuum HOM05D000475 ORTHO05D000343 9.4e-06 56.6 77 45.5
FvH4_3g12300 Fragaria vesca HOM05D000475 ORTHO05D000343 9.4e-06 56.6 81 42.0
Rhsim01G0229100 Rhododendron simsii HOM05D000475 ORTHO05D000343 9.4e-06 56.6 77 41.6


User provided reference genes

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