Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0763G085 Amborella trichopoda HOM05D007285 ORTHO05D009224 3.0e-55 218.4 119 100.0
Lalb_Chr15g0089751 Lupinus albus HOM05D007285 ORTHO05D009224 1.5e-22 109.8 110 60.9
Actinidia07587 Actinidia chinensis HOM05D007285 ORTHO05D009224 5.7e-22 107.8 95 64.2
SEGI_38595 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 2.8e-21 105.5 100 54.0
arahy.Tifrunner.gnm1.ann1.J7N80D Arachis hypogaea HOM05D007285 ORTHO05D009224 1.1e-20 103.6 116 53.4
Nn1g04136 Nelumbo nucifera HOM05D007285 ORTHO05D009224 1.1e-20 103.6 108 55.6
Prupe.4G049200 Prunus persica HOM05D007285 ORTHO05D009224 1.1e-20 103.6 104 54.8
Atru.chr10.1858 Acer truncatum HOM05D007285 ORTHO05D009224 1.4e-20 103.2 112 55.4
arahy.Tifrunner.gnm1.ann1.VSLT1W Arachis hypogaea HOM05D007285 ORTHO05D009224 1.8e-20 102.8 114 53.5
Gohir.D06G133300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 3.1e-20 102.1 105 56.2
Gorai.010G155100 Gossypium raimondii HOM05D007285 ORTHO05D009224 3.1e-20 102.1 105 56.2
MD10G1292600 Malus domestica HOM05D007285 ORTHO05D009224 3.1e-20 102.1 96 57.3
TWI38G2229 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 3.1e-20 102.1 89 62.9
CARHR027740 Cardamine hirsuta HOM05D007285 ORTHO05D009224 5.3e-20 101.3 92 59.8
Glyma.13G178000 Glycine max HOM05D007285 ORTHO05D009224 5.3e-20 101.3 98 59.2
Hma1.2p1_0208F.1_g088230 Hydrangea macrophylla HOM05D007285 ORTHO05D009224 5.3e-20 101.3 107 55.1
Rhsim02G0132100 Rhododendron simsii HOM05D007285 ORTHO05D009224 5.3e-20 101.3 95 61.1
CsaV3_1G012400 Cucumis sativus L. HOM05D007285 ORTHO05D009224 6.9e-20 100.9 107 55.1
FAN16G1611 Fragaria x ananassa HOM05D007285 ORTHO05D009224 6.9e-20 100.9 102 52.9
RcHm_v2.0_Chr5g0008721 Rosa chinensis HOM05D007285 ORTHO05D009224 6.9e-20 100.9 106 51.9
COL.COLO4_31450 Corchorus olitorius HOM05D007285 ORTHO05D009224 9.0e-20 100.5 87 65.5
FvH4_3g08990 Fragaria vesca HOM05D007285 ORTHO05D009224 9.0e-20 100.5 102 52.9
FAN21G1653 Fragaria x ananassa HOM05D007285 ORTHO05D009224 9.0e-20 100.5 107 50.5
Glyma.07G198400 Glycine max HOM05D007285 ORTHO05D009224 9.0e-20 100.5 98 59.2
CSS0032734 Camellia sinensis var. sinensis HOM05D007285 ORTHO05D009224 1.2e-19 100.1 101 59.4
MD00G1116000 Malus domestica HOM05D007285 ORTHO05D009224 1.2e-19 100.1 101 52.5
ClCG03G008150 Citrullus lanatus HOM05D007285 ORTHO05D009224 1.5e-19 99.8 107 55.1
Lj4g0016922 Lotus japonicus HOM05D007285 ORTHO05D009224 2.0e-19 99.4 106 55.7
FAN25G3510 Fragaria x ananassa HOM05D007285 ORTHO05D009224 2.6e-19 99.0 94 55.3
Medtr4g088680 Medicago truncatula HOM05D007285 ORTHO05D009224 2.6e-19 99.0 110 55.5
VMungo0251G0987 Vigna mungo HOM05D007285 ORTHO05D009224 2.6e-19 99.0 106 54.7
Phvul.002G229600 Phaseolus vulgaris HOM05D007285 ORTHO05D009224 3.4e-19 98.6 109 52.3
Sed0014393 Sechium edule HOM05D007285 ORTHO05D009224 3.4e-19 98.6 112 51.8
AT1G28250 Arabidopsis thaliana HOM05D007285 ORTHO05D009224 4.5e-19 98.2 88 61.4
BcaB07g32433 Brassica carinata HOM05D007285 ORTHO05D009224 5.9e-19 97.8 86 62.8
Carub.0001s2669 Capsella rubella HOM05D007285 ORTHO05D009224 5.9e-19 97.8 92 59.8
Aa31LG6G10160 Aethionema arabicum HOM05D007285 ORTHO05D009224 7.7e-19 97.4 86 62.8
TWI63G1057 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 7.7e-19 97.4 87 63.2
BcaC05g26830 Brassica carinata HOM05D007285 ORTHO05D009224 1.3e-18 96.7 86 61.6
C05p27060 Brassica napus HOM05D007285 ORTHO05D009224 1.3e-18 96.7 86 61.6
BolC3t19748H Brassica oleracea HOM05D007285 ORTHO05D009224 1.3e-18 96.7 90 60.0
Dinv40575 Davidia involucrata HOM05D007285 ORTHO05D009224 1.3e-18 96.7 101 57.4
A09p37820 Brassica napus HOM05D007285 ORTHO05D009224 1.7e-18 96.3 85 62.4
BraA09t39294Z Brassica rapa HOM05D007285 ORTHO05D009224 1.7e-18 96.3 85 62.4
Migut.M01131 Erythranthe guttata HOM05D007285 ORTHO05D009224 1.7e-18 96.3 96 56.2
Nitab4.5_0005745g0020 Nicotiana tabacum HOM05D007285 ORTHO05D009224 1.7e-18 96.3 104 53.8
PSO541G0778 Papaver somniferum HOM05D007285 ORTHO05D009224 1.7e-18 96.3 109 50.5
Thecc.06G185100 Theobroma cacao HOM05D007285 ORTHO05D009224 1.7e-18 96.3 103 54.4
Actinidia26129 Actinidia chinensis HOM05D007285 ORTHO05D009224 2.2e-18 95.9 95 60.0
Ca_18554_v3 Cicer arietinum L. HOM05D007285 ORTHO05D009224 2.2e-18 95.9 113 54.0
Ciclev10017252m.g Citrus clementina HOM05D007285 ORTHO05D009224 2.2e-18 95.9 103 56.3
Gohir.A06G129300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 2.2e-18 95.9 105 53.3
CiPaw.09G061300 Carya illinoinensis HOM05D007285 ORTHO05D009224 2.9e-18 95.5 105 55.2
Cc02_g13540 Coffea canephora HOM05D007285 ORTHO05D009224 2.9e-18 95.5 111 52.3
Manes.17G046800 Manihot esculenta HOM05D007285 ORTHO05D009224 2.9e-18 95.5 90 61.1
Zm00001eb305570 Zea mays HOM05D007285 ORTHO05D009224 2.9e-18 95.5 102 52.0
CDE01G0551 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 3.8e-18 95.1 103 51.5
Potri.004G045400 Populus trichocarpa HOM05D007285 ORTHO05D009224 3.8e-18 95.1 101 53.5
AL1G41800 Arabidopsis lyrata HOM05D007285 ORTHO05D009224 5.0e-18 94.7 86 60.5
Psat7g114520 Pisum sativum HOM05D007285 ORTHO05D009224 5.0e-18 94.7 94 58.5
TPR.G16329 Trifolium pratense HOM05D007285 ORTHO05D009224 5.0e-18 94.7 106 54.7
Lsat_1_v5_gn_4_52261 Lactuca sativa HOM05D007285 ORTHO05D009224 6.5e-18 94.4 97 54.6
Sed0001788 Sechium edule HOM05D007285 ORTHO05D009224 8.5e-18 94.0 107 53.3
SGA_v2.0_scaffold100G29692 Striga asiatica HOM05D007285 ORTHO05D009224 1.9e-17 92.8 112 53.6
unitig_27.g24965 Utricularia gibba HOM05D007285 ORTHO05D009224 1.9e-17 92.8 110 49.1
DCAR_008032 Daucus carota HOM05D007285 ORTHO05D009224 2.5e-17 92.4 102 52.9
Dinv17325 Davidia involucrata HOM05D007285 ORTHO05D009224 3.2e-17 92.0 92 59.8
MSTRG.7339 Avicennia marina HOM05D007285 ORTHO05D009224 4.2e-17 91.7 96 54.2
HanXRQChr14g0435131 Helianthus annuus HOM05D007285 ORTHO05D009224 5.5e-17 91.3 95 55.8
SalBow8G5072 Salvia bowleyana HOM05D007285 ORTHO05D009224 5.5e-17 91.3 94 58.5
CANSAT35G0751 Cannabis sativa HOM05D007285 ORTHO05D009224 7.2e-17 90.9 106 48.1
HPP92_007016 Vanilla planifolia HOM05D007285 ORTHO05D009224 9.4e-17 90.5 107 47.7
Solyc02g078010.4 Solanum lycopersicum HOM05D007285 ORTHO05D009224 1.2e-16 90.1 104 51.9
Sopen02g022850 Solanum pennellii HOM05D007285 ORTHO05D009224 1.6e-16 89.7 104 51.9
TAR626G1757 Trochodendron aralioides HOM05D007285 ORTHO05D009224 2.1e-16 89.4 103 53.4
PGR042G2867 Punica granatum HOM05D007285 ORTHO05D009224 2.7e-16 89.0 108 50.0
Eucgr.E03264 Eucalyptus grandis HOM05D007285 ORTHO05D009224 3.6e-16 88.6 100 51.0
Thhalv10009792m.g Eutrema salsugineum HOM05D007285 ORTHO05D009224 4.6e-16 88.2 99 53.5
Peaxi162Scf00623g00519 Petunia axillaris HOM05D007285 ORTHO05D009224 6.1e-16 87.8 113 50.4
THA.LOC104820545 Tarenaya hassleriana HOM05D007285 ORTHO05D009224 1.0e-15 87.0 97 51.5
CAN.G529.14 Capsicum annuum HOM05D007285 ORTHO05D009224 2.3e-15 85.9 103 50.5
BolC5t31425H Brassica oleracea HOM05D007285 ORTHO05D009224 3.0e-15 85.5 104 51.0
Hund23773 Selenicereus undatus HOM05D007285 ORTHO05D009224 1.5e-14 83.2 107 51.4
EL10Ac8g20395 Beta vulgaris HOM05D007285 ORTHO05D009224 2.0e-14 82.8 107 48.6
BcaC01g00030 Brassica carinata HOM05D007285 ORTHO05D009224 2.5e-14 82.4 116 46.6
Os07g0299600 Oryza sativa ssp. japonica HOM05D007285 ORTHO05D009224 4.3e-14 81.6 85 52.9
Ah.09g237440 Amaranthus hybridus HOM05D007285 ORTHO05D009224 1.7e-13 79.7 107 48.6
AUR62017028 Chenopodium quinoa HOM05D007285 ORTHO05D009224 2.8e-13 79.0 107 47.7
Sc05g0007570 Simmondsia chinensis HOM05D007285 ORTHO05D009224 6.3e-13 77.8 94 51.1
vmacro15913 Vaccinium macrocarpon HOM05D007285 ORTHO05D009224 4.5e-11 71.6 77 54.5
Haze_06424 Corylus avellana HOM05D007285 ORTHO05D009224 5.9e-11 71.2 77 53.2
BcaB03g12118 Brassica carinata HOM05D007285 ORTHO05D009224 7.7e-11 70.9 72 55.6
Mapoly0007s0165 Marchantia polymorpha HOM05D007285 ORTHO05D009224 7.7e-11 70.9 94 44.7
Pp3c8_510 Physcomitrium patens HOM05D007285 ORTHO05D009224 1.1e-09 67.0 100 42.0
CDE12G0235 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 1.4e-09 66.6 103 42.7
DCAR_004065 Daucus carota HOM05D007285 ORTHO05D009224 2.5e-09 65.9 79 50.6
QL05p041285 Quercus lobata HOM05D007285 ORTHO05D009224 9.4e-09 63.9 75 49.3
ECA234G4273 Erigeron canadensis HOM05D007285 ORTHO05D009224 2.1e-08 62.8 71 50.7
Sabra04G0028300 Salix brachista HOM05D007285 ORTHO05D009224 2.7e-08 62.4 153 34.0
SEGI_39568 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 4.7e-08 61.6 54 57.4
MELO3C002614.2 Cucumis melo HOM05D007285 ORTHO05D009224 6.1e-08 61.2 63 57.1
PGSC0003DMG401029703 Solanum tuberosum HOM05D007285 ORTHO05D009224 7.9e-08 60.8 78 48.7
SalBow8G3155 Salvia bowleyana HOM05D007285 ORTHO05D009224 2.3e-07 59.3 61 57.4
C03p74970 Brassica napus HOM05D007285 ORTHO05D009224 3.3e-06 55.5 100 40.0


User provided reference genes

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