Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0762G055 Amborella trichopoda HOM05D007326 ORTHO05D009048 3.5e-52 208.0 103 100.0
ATR0037G036 Amborella trichopoda HOM05D007326 ORTHO05D009048 1.7e-43 179.1 110 85.5
COL.COLO4_03426 Corchorus olitorius HOM05D007326 ORTHO05D009048 5.4e-13 77.8 79 53.2
ECA232G0297 Erigeron canadensis HOM05D007326 ORTHO05D009048 2.1e-12 75.9 80 50.0
Potri.015G017700 Populus trichocarpa HOM05D007326 ORTHO05D009048 2.7e-12 75.5 63 58.7
Glyma.07G086800 Glycine max HOM05D007326 ORTHO05D009048 3.5e-12 75.1 109 43.1
Nitab4.5_0002492g0030 Nicotiana tabacum HOM05D007326 ORTHO05D009048 3.5e-12 75.1 65 55.4
Gohir.A11G014200 Gossypium hirsutum HOM05D007326 ORTHO05D009048 7.8e-12 73.9 84 51.2
Gohir.D11G014400 Gossypium hirsutum HOM05D007326 ORTHO05D009048 7.8e-12 73.9 84 51.2
Gorai.007G014800 Gossypium raimondii HOM05D007326 ORTHO05D009048 7.8e-12 73.9 84 51.2
PGSC0003DMG400009118 Solanum tuberosum HOM05D007326 ORTHO05D009048 7.8e-12 73.9 67 55.2
Actinidia06160 Actinidia chinensis HOM05D007326 ORTHO05D009048 1.3e-11 73.2 54 64.8
Ciclev10006260m.g Citrus clementina HOM05D007326 ORTHO05D009048 1.7e-11 72.8 108 44.4
Glyma.09G190100 Glycine max HOM05D007326 ORTHO05D009048 3.0e-11 72.0 106 42.5
VMungo0464G1195 Vigna mungo HOM05D007326 ORTHO05D009048 3.0e-11 72.0 82 47.6
MSTRG.55 Avicennia marina HOM05D007326 ORTHO05D009048 5.1e-11 71.2 68 52.9
CSS0025602 Camellia sinensis var. sinensis HOM05D007326 ORTHO05D009048 5.1e-11 71.2 32 93.8
Lsat_1_v5_gn_9_58181 Lactuca sativa HOM05D007326 ORTHO05D009048 5.1e-11 71.2 78 48.7
Atru.chr1.147 Acer truncatum HOM05D007326 ORTHO05D009048 6.6e-11 70.9 78 50.0
EL10Ac9g21379 Beta vulgaris HOM05D007326 ORTHO05D009048 6.6e-11 70.9 33 87.9
Manes.06G159200 Manihot esculenta HOM05D007326 ORTHO05D009048 6.6e-11 70.9 87 50.6
Thecc.03G195600 Theobroma cacao HOM05D007326 ORTHO05D009048 6.6e-11 70.9 110 43.6
Nitab4.5_0000714g0090 Nicotiana tabacum HOM05D007326 ORTHO05D009048 8.7e-11 70.5 65 58.5
AUR62010038 Chenopodium quinoa HOM05D007326 ORTHO05D009048 1.1e-10 70.1 33 87.9
Os06g0157800 Oryza sativa ssp. japonica HOM05D007326 ORTHO05D009048 1.1e-10 70.1 34 85.3
CSS0006442 Camellia sinensis var. sinensis HOM05D007326 ORTHO05D009048 1.5e-10 69.7 32 90.6
Medtr3g109290 Medicago truncatula HOM05D007326 ORTHO05D009048 1.5e-10 69.7 32 87.5
Nn4g24310 Nelumbo nucifera HOM05D000291 ORTHO05D009048 1.5e-10 69.7 95 44.2
Peaxi162Scf00550g00426 Petunia axillaris HOM05D007326 ORTHO05D009048 1.5e-10 69.7 65 52.3
Solyc03g083450.1 Solanum lycopersicum HOM05D007326 ORTHO05D009048 1.5e-10 69.7 69 56.5
Eucgr.A01472 Eucalyptus grandis HOM05D007326 ORTHO05D009048 1.9e-10 69.3 33 84.8
FAN10G1221 Fragaria x ananassa HOM05D007326 ORTHO05D009048 1.9e-10 69.3 36 83.3
SGA_v2.0_scaffold55G19762 Striga asiatica HOM05D007326 ORTHO05D009048 1.9e-10 69.3 58 60.3
TPR.G14875 Trifolium pratense HOM05D007326 ORTHO05D009048 1.9e-10 69.3 89 47.2
TAR629G0302 Trochodendron aralioides HOM05D007326 ORTHO05D009048 1.9e-10 69.3 85 47.1
Ah.04g150610 Amaranthus hybridus HOM05D007326 ORTHO05D009048 2.5e-10 68.9 34 82.4
Manes.05G205250 Manihot esculenta HOM05D007326 ORTHO05D009048 2.5e-10 68.9 42 78.6
SGA_v2.0_scaffold105G30435 Striga asiatica HOM05D007326 ORTHO05D009048 2.5e-10 68.9 58 60.3
Duzib205G1092 Durio zibethinus HOM05D007326 ORTHO05D009048 4.3e-10 68.2 116 42.2
MBI06_g08457_MAGBIO Magnolia biondii HOM05D007326 ORTHO05D009048 5.6e-10 67.8 81 51.9
PGR042G3637 Punica granatum HOM05D007326 ORTHO05D009048 5.6e-10 67.8 75 49.3
Sc03g0007330 Simmondsia chinensis HOM05D007326 ORTHO05D009048 5.6e-10 67.8 50 64.0
Zm00001eb376510 Zea mays HOM05D007326 ORTHO05D009048 5.6e-10 67.8 33 84.8
AL8G43810 Arabidopsis lyrata HOM05D007326 ORTHO05D009048 7.3e-10 67.4 34 82.4
Dinv29296 Davidia involucrata HOM05D007326 ORTHO05D009048 7.3e-10 67.4 96 46.9
Thhalv10005175m.g Eutrema salsugineum HOM05D007326 ORTHO05D009048 7.3e-10 67.4 34 82.4
Phvul.004G162900 Phaseolus vulgaris HOM05D007326 ORTHO05D009048 7.3e-10 67.4 30 93.3
Sopen03g023220 Solanum pennellii HOM05D007326 ORTHO05D009048 7.3e-10 67.4 64 51.6
CAN.G108.61 Capsicum annuum HOM05D007326 ORTHO05D009048 9.6e-10 67.0 51 66.7
Ca_15635_v3 Cicer arietinum L. HOM05D007326 ORTHO05D009048 9.6e-10 67.0 30 90.0
FAN10G2940 Fragaria x ananassa HOM05D007326 ORTHO05D009048 9.6e-10 67.0 36 80.6
Lj1g0012737 Lotus japonicus HOM05D007326 ORTHO05D009048 9.6e-10 67.0 53 64.2
Aa31LG1G16060 Aethionema arabicum HOM05D007326 ORTHO05D009048 1.3e-09 66.6 100 45.0
Cpa.g.sc3.64 Carica papaya HOM05D007326 ORTHO05D009048 1.6e-09 66.2 33 84.8
Psat0s2030g0040 Pisum sativum HOM05D007326 ORTHO05D009048 1.6e-09 66.2 52 63.5
BcaB02g09919 Brassica carinata HOM05D007326 ORTHO05D009048 2.1e-09 65.9 34 79.4
Carub.0008s2698 Capsella rubella HOM05D007326 ORTHO05D009048 2.1e-09 65.9 34 79.4
CARHR280100 Cardamine hirsuta HOM05D007326 ORTHO05D009048 2.1e-09 65.9 34 79.4
C03p59560 Brassica napus HOM05D007326 ORTHO05D009048 2.8e-09 65.5 31 87.1
BolC3t18219H Brassica oleracea HOM05D007326 ORTHO05D009048 2.8e-09 65.5 31 87.1
CDE05G0016 Ceratophyllum demersum HOM05D007326 ORTHO05D009048 3.6e-09 65.1 44 65.9
ClCG01G000490 Citrullus lanatus HOM05D007326 ORTHO05D009048 3.6e-09 65.1 88 46.6
SEGI_38766 Sequoiadendron giganteum HOM05D007326 ORTHO05D009048 3.6e-09 65.1 34 79.4
TPR.G1327 Trifolium pratense HOM05D007326 ORTHO05D009048 3.6e-09 65.1 81 43.2
QL09p009621 Quercus lobata HOM05D007326 ORTHO05D009048 4.8e-09 64.7 37 73.0
CiPaw.06G009800 Carya illinoinensis HOM05D007326 ORTHO05D009048 8.1e-09 63.9 107 43.9
Rhsim09G0011500 Rhododendron simsii HOM05D007326 ORTHO05D009048 8.1e-09 63.9 79 48.1
TWI23G0901 Tripterygium wilfordii HOM05D007326 ORTHO05D009048 8.1e-09 63.9 82 50.0
Sp2g29160 Schrenkiella parvula HOM05D007326 ORTHO05D009048 1.1e-08 63.5 90 41.1
vmacro06547 Vaccinium macrocarpon HOM05D007326 ORTHO05D009048 1.1e-08 63.5 88 46.6
Oeu037093.1 Olea europaea HOM05D007326 ORTHO05D009048 1.4e-08 63.2 56 58.9
Actinidia06159 Actinidia chinensis HOM05D007326 ORTHO05D009048 1.8e-08 62.8 71 50.7
Sed0023316 Sechium edule HOM05D007326 ORTHO05D009048 1.8e-08 62.8 85 43.5
THA.LOC104819263 Tarenaya hassleriana HOM05D007326 ORTHO05D009048 1.8e-08 62.8 82 45.1
Actinidia06153 Actinidia chinensis HOM05D003276 ORTHO05D003809 3.1e-08 62.0 54 57.4
AUR62013031 Chenopodium quinoa HOM05D007326 ORTHO05D009048 4.0e-08 61.6 81 45.7
Prupe.2G311900 Prunus persica HOM05D007326 ORTHO05D009048 4.0e-08 61.6 108 37.0
unitig_8.g3560 Utricularia gibba HOM05D000146 ORTHO05D000178 6.9e-08 60.8 64 51.6
A06p32910 Brassica napus HOM05D007326 ORTHO05D009048 9.0e-08 60.5 96 41.7
BraA06t26223Z Brassica rapa HOM05D007326 ORTHO05D009048 9.0e-08 60.5 96 41.7
Haze_14278 Corylus avellana HOM05D007326 ORTHO05D009048 9.0e-08 60.5 122 36.9
CsaV3_5G000570 Cucumis sativus L. HOM05D007326 ORTHO05D009048 9.0e-08 60.5 96 42.7
Hma1.2p1_0538F.1_g174400 Hydrangea macrophylla HOM05D007326 ORTHO05D009048 9.0e-08 60.5 90 43.3
MCO04G224 Micromonas commoda HOM05D007326 ORTHO05D009048 9.0e-08 60.5 60 58.3
Pp3c23_5100 Physcomitrium patens HOM05D007326 ORTHO05D009048 9.0e-08 60.5 70 45.7
Nitab4.5_0000714g0080 Nicotiana tabacum HOM05D001433 ORTHO05D009048 1.2e-07 60.1 65 47.7
Oeu030278.1 Olea europaea HOM05D007326 ORTHO05D009048 1.5e-07 59.7 89 40.4
CANSAT21G2203 Cannabis sativa HOM05D007326 ORTHO05D009048 2.0e-07 59.3 98 40.8
TAR375G0672 Trochodendron aralioides HOM05D007326 ORTHO05D009048 2.0e-07 59.3 76 46.1
Aqoxy7G00103 Aquilegia oxysepala HOM05D007326 ORTHO05D009048 2.6e-07 58.9 91 42.9
RcHm_v2.0_Chr1g0381021 Rosa chinensis HOM05D007326 ORTHO05D009048 3.4e-07 58.5 76 46.1
Mapoly0007s0050 Marchantia polymorpha HOM05D007326 ORTHO05D009048 4.5e-07 58.2 86 43.0
PRCOL_00002099 Prasinoderma coloniale HOM05D007326 ORTHO05D009048 5.8e-07 57.8 48 64.6
AT5G67490 Arabidopsis thaliana HOM05D007326 ORTHO05D009048 9.9e-07 57.0 91 41.8
TAR629G2746 Trochodendron aralioides HOM05D007326 ORTHO05D009048 1.3e-06 56.6 37 67.6
HPP92_020021 Vanilla planifolia HOM05D007326 ORTHO05D009048 1.3e-06 56.6 92 43.5
MELO3C005879.2 Cucumis melo HOM05D007326 ORTHO05D009048 2.9e-06 55.5 87 40.2
FAN01G1037 Fragaria x ananassa HOM05D007326 ORTHO05D009048 2.9e-06 55.5 34 70.6
FAN06G2911 Fragaria x ananassa HOM05D007326 ORTHO05D009048 2.9e-06 55.5 79 44.3
FAN03G0879 Fragaria x ananassa HOM05D007326 ORTHO05D009048 6.4e-06 54.3 72 47.2
FvH4_7g31800 Fragaria vesca HOM05D000354 ORTHO05D000717 8.4e-06 53.9 72 45.8


User provided reference genes

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