Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0762G005 Amborella trichopoda HOM05D005666 ORTHO05D007183 2.9e-199 698.4 349 100.0
ATR0686G164 Amborella trichopoda HOM05D005666 ORTHO05D007183 3.7e-162 575.1 317 91.2
ATR0919G001 Amborella trichopoda HOM05D005666 ORTHO05D007183 1.4e-132 476.9 240 99.2
Aqoxy3G01199 Aquilegia oxysepala HOM05D005666 ORTHO05D007183 8.9e-100 367.9 336 55.4
MBI16_g31718_MAGBIO Magnolia biondii HOM05D005666 ORTHO05D007183 2.6e-99 366.3 353 53.8
TAR371G0349 Trochodendron aralioides HOM05D005666 ORTHO05D007183 2.2e-98 363.2 339 54.6
Nn3g16730 Nelumbo nucifera HOM05D005666 ORTHO05D007183 6.0e-96 355.1 336 54.2
PSO017G6377 Papaver somniferum HOM05D005666 ORTHO05D007183 6.2e-93 345.1 337 53.1
PSO478G0823 Papaver somniferum HOM05D005666 ORTHO05D007183 6.2e-93 345.1 337 52.8
GSVIVG01032407001 Vitis vinifera HOM05D005666 ORTHO05D007183 8.9e-92 341.3 348 52.9
CDE05G2460 Ceratophyllum demersum HOM05D005666 ORTHO05D007183 3.4e-91 339.3 328 54.3
Dinv33442 Davidia involucrata HOM05D005666 ORTHO05D007183 2.9e-90 336.3 335 53.1
QL02p074714 Quercus lobata HOM05D005666 ORTHO05D007183 4.9e-90 335.5 333 51.7
Atru.chr6.2394 Acer truncatum HOM05D005666 ORTHO05D007183 2.4e-89 333.2 335 52.5
Haze_10618 Corylus avellana HOM05D005666 ORTHO05D007183 3.2e-89 332.8 341 51.3
CSS0006540 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 5.4e-89 332.0 334 53.0
Migut.K01395 Erythranthe guttata HOM05D005666 ORTHO05D007183 1.2e-88 330.9 325 53.2
Hma1.2p1_0999F.1_g246210 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 1.6e-88 330.5 343 51.3
Actinidia35772 Actinidia chinensis HOM05D005666 ORTHO05D007183 2.1e-88 330.1 341 52.5
Phvul.004G006900 Phaseolus vulgaris HOM05D005666 ORTHO05D007183 4.6e-88 328.9 349 50.7
Hma1.2p1_0999F.1_g246220 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 6.0e-88 328.6 331 52.0
MD17G1027000 Malus domestica HOM05D005666 ORTHO05D007183 2.3e-87 326.6 336 50.3
VMungo0464G0315 Vigna mungo HOM05D005666 ORTHO05D007183 3.0e-87 326.2 341 49.3
Prupe.3G291700 Prunus persica HOM05D005666 ORTHO05D007183 5.1e-87 325.5 336 49.7
SGA_v2.0_scaffold47G17503 Striga asiatica HOM05D005666 ORTHO05D007183 5.1e-87 325.5 334 52.7
CSS0008870 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 8.6e-87 324.7 314 53.8
Glyma.05G003600 Glycine max HOM05D005666 ORTHO05D007183 8.6e-87 324.7 342 49.7
Lalb_Chr12g0199101 Lupinus albus HOM05D005666 ORTHO05D007183 8.6e-87 324.7 349 48.7
Lju41A42G100 Lonicera japonica HOM05D005666 ORTHO05D007183 1.1e-86 324.3 339 51.3
CANSAT64G2468 Cannabis sativa HOM05D005666 ORTHO05D007183 1.9e-86 323.6 345 49.3
Gohir.D04G057600 Gossypium hirsutum HOM05D005666 ORTHO05D007183 2.5e-86 323.2 346 49.7
Sabra16G0224200 Salix brachista HOM05D005666 ORTHO05D007183 2.5e-86 323.2 337 49.9
SEGI_39396 Sequoiadendron giganteum HOM05D005666 ORTHO05D007183 4.3e-86 322.4 345 50.1
Gohir.A05G355700 Gossypium hirsutum HOM05D005666 ORTHO05D007183 7.3e-86 321.6 347 49.6
COL.COLO4_29116 Corchorus olitorius HOM05D005666 ORTHO05D007183 9.6e-86 321.2 343 50.1
Gorai.012G064300 Gossypium raimondii HOM05D005666 ORTHO05D007183 9.6e-86 321.2 346 49.7
Thecc.04G017300 Theobroma cacao HOM05D005666 ORTHO05D007183 9.6e-86 321.2 347 49.0
vmacro18287 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 1.2e-85 320.9 331 51.1
TWI56G0621 Tripterygium wilfordii HOM05D005666 ORTHO05D007183 1.6e-85 320.5 338 48.2
Ca_04159_v3 Cicer arietinum L. HOM05D005666 ORTHO05D007183 2.1e-85 320.1 341 50.1
MD09G1027000 Malus domestica HOM05D005666 ORTHO05D007183 2.1e-85 320.1 336 50.0
Duzib147G1248 Durio zibethinus HOM05D005666 ORTHO05D007183 2.8e-85 319.7 347 49.0
HanXRQChr15g0475291 Helianthus annuus HOM05D005666 ORTHO05D007183 4.7e-85 318.9 328 51.2
Zm00001eb156580 Zea mays HOM05D005666 ORTHO05D007183 6.2e-85 318.5 329 49.5
Cc07_g01670 Coffea canephora HOM05D005666 ORTHO05D007183 1.1e-84 317.8 335 48.7
Glyma.19G004600 Glycine max HOM05D005666 ORTHO05D007183 1.8e-84 317.0 339 50.7
Manes.17G112200 Manihot esculenta HOM05D005666 ORTHO05D007183 1.8e-84 317.0 337 49.6
ECA246G2761 Erigeron canadensis HOM05D005666 ORTHO05D007183 3.1e-84 316.2 335 49.9
Lalb_Chr13g0300491 Lupinus albus HOM05D005666 ORTHO05D007183 3.1e-84 316.2 341 48.4
PGR083G1531 Punica granatum HOM05D005666 ORTHO05D007183 5.2e-84 315.5 336 50.0
TPR.G14074 Trifolium pratense HOM05D005666 ORTHO05D007183 5.2e-84 315.5 339 48.7
Lsat_1_v5_gn_0_47721 Lactuca sativa HOM05D005666 ORTHO05D007183 6.9e-84 315.1 331 50.8
Lj2g0025454 Lotus japonicus HOM05D005666 ORTHO05D007183 6.9e-84 315.1 332 50.3
Rhsim08G0049000 Rhododendron simsii HOM05D005666 ORTHO05D007183 6.9e-84 315.1 337 50.1
Cpa.g.sc130.81 Carica papaya HOM05D005666 ORTHO05D007183 1.2e-83 314.3 338 50.3
Potri.001G345200 Populus trichocarpa HOM05D005666 ORTHO05D007183 1.2e-83 314.3 337 48.4
Ah.05g168070 Amaranthus hybridus HOM05D005666 ORTHO05D007183 1.5e-83 313.9 335 49.3
Oeu048621.1 Olea europaea HOM05D005666 ORTHO05D007183 2.0e-83 313.5 330 49.7
CSS0011984 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 4.4e-83 312.4 329 51.7
Aa31LG11G15280 Aethionema arabicum HOM05D005666 ORTHO05D007183 1.3e-82 310.8 325 50.5
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 1.3e-82 310.8 331 49.2
arahy.Tifrunner.gnm1.ann1.XQUA9L Arachis hypogaea HOM05D005666 ORTHO05D007183 1.7e-82 310.5 331 49.2
Rhsim10G0213300 Rhododendron simsii HOM05D005666 ORTHO05D007183 1.7e-82 310.5 337 49.6
MELO3C021580.2 Cucumis melo HOM05D005666 ORTHO05D007183 4.9e-82 308.9 340 47.6
SalBow7G2092 Salvia bowleyana HOM05D005666 ORTHO05D007183 4.9e-82 308.9 333 49.8
DCAR_027499 Daucus carota HOM05D005666 ORTHO05D007183 8.4e-82 308.1 325 50.2
ClCG09G019260 Citrullus lanatus HOM05D005666 ORTHO05D007183 1.1e-81 307.8 345 47.0
Ciclev10014455m.g Citrus clementina HOM05D005666 ORTHO05D007183 1.1e-81 307.8 330 50.0
CsaV3_5G027130 Cucumis sativus L. HOM05D005666 ORTHO05D007183 1.9e-81 307.0 335 47.2
Medtr8g094170 Medicago truncatula HOM05D005666 ORTHO05D007183 2.4e-81 306.6 342 47.1
RcHm_v2.0_Chr2g0172791 Rosa chinensis HOM05D005666 ORTHO05D007183 2.4e-81 306.6 335 47.5
Peaxi162Scf00080g00117 Petunia axillaris HOM05D005666 ORTHO05D007183 3.2e-81 306.2 322 49.4
FAN05G0542 Fragaria x ananassa HOM05D005666 ORTHO05D007183 9.3e-81 304.7 335 47.5
Hund22837 Selenicereus undatus HOM05D005666 ORTHO05D007183 9.3e-81 304.7 334 49.1
Eucgr.L01920 Eucalyptus grandis HOM05D005666 ORTHO05D007183 1.2e-80 304.3 346 46.8
HanXRQChr17g0548481 Helianthus annuus HOM05D005666 ORTHO05D007183 1.2e-80 304.3 329 49.2
FAN02G4175 Fragaria x ananassa HOM05D005666 ORTHO05D007183 2.7e-80 303.1 335 47.2
FAN05G2905 Fragaria x ananassa HOM05D005666 ORTHO05D007183 3.5e-80 302.8 334 47.6
Eucgr.J02243 Eucalyptus grandis HOM05D005666 ORTHO05D007183 4.6e-80 302.4 346 46.8
AUR62026681 Chenopodium quinoa HOM05D005666 ORTHO05D007183 6.0e-80 302.0 336 47.0
FAN14G3607 Fragaria x ananassa HOM05D005666 ORTHO05D007183 1.0e-79 301.2 335 46.6
FvH4_6g51190 Fragaria vesca HOM05D005666 ORTHO05D007183 1.7e-79 300.4 335 46.3
AUR62040590 Chenopodium quinoa HOM05D005666 ORTHO05D007183 2.3e-79 300.1 332 48.5
CAN.G1057.3 Capsicum annuum HOM05D005666 ORTHO05D007183 3.9e-79 299.3 328 47.0
FAN09G4801 Fragaria x ananassa HOM05D005666 ORTHO05D007183 6.6e-79 298.5 335 46.0
Sc03g0007440 Simmondsia chinensis HOM05D005666 ORTHO05D007183 8.7e-79 298.1 335 49.0
Sopen02g016930 Solanum pennellii HOM05D005666 ORTHO05D007183 8.7e-79 298.1 324 47.8
PGSC0003DMG400006959 Solanum tuberosum HOM05D005666 ORTHO05D007183 8.7e-79 298.1 324 47.8
Sp6g25230 Schrenkiella parvula HOM05D005666 ORTHO05D007183 1.1e-78 297.7 328 49.1
BcaB08g36600 Brassica carinata HOM05D005666 ORTHO05D007183 2.5e-78 296.6 328 49.1
Nitab4.5_0002529g0030 Nicotiana tabacum HOM05D005666 ORTHO05D007183 2.5e-78 296.6 303 50.5
CiPaw.03G043800 Carya illinoinensis HOM05D005666 ORTHO05D007183 3.3e-78 296.2 338 47.0
Nitab4.5_0008365g0020 Nicotiana tabacum HOM05D005666 ORTHO05D007183 3.3e-78 296.2 304 50.3
Psat1g054440 Pisum sativum HOM05D005666 ORTHO05D007183 5.6e-78 295.4 332 48.5
Thhalv10012831m.g Eutrema salsugineum HOM05D005666 ORTHO05D007183 9.6e-78 294.7 328 48.8
Carub.0006s1746 Capsella rubella HOM05D005666 ORTHO05D007183 1.3e-77 294.3 328 47.9
Sed0018750 Sechium edule HOM05D005666 ORTHO05D007183 8.1e-77 291.6 335 44.8
AL6G30550 Arabidopsis lyrata HOM05D005666 ORTHO05D007183 2.4e-76 290.0 328 47.9
vmacro06910 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 2.4e-76 290.0 337 47.8
AT5G19130 Arabidopsis thaliana HOM05D005666 ORTHO05D007183 3.1e-76 289.7 328 47.6
C09p57110 Brassica napus HOM05D005666 ORTHO05D007183 1.2e-75 287.7 328 48.8
BraA10t44118Z Brassica rapa HOM05D005666 ORTHO05D007183 5.8e-75 285.4 328 47.6
A10p20490 Brassica napus HOM05D005666 ORTHO05D007183 9.9e-75 284.6 332 47.3
BcaC04g18594 Brassica carinata HOM05D005666 ORTHO05D007183 1.7e-74 283.9 328 48.2
BolC9t58577H Brassica oleracea HOM05D005666 ORTHO05D007183 2.2e-74 283.5 337 46.6
THA.LOC104824726 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 2.8e-69 266.5 299 46.5
Solyc02g067820.4 Solanum lycopersicum HOM05D005666 ORTHO05D007183 3.7e-69 266.2 324 44.4
unitig_747.g21863 Utricularia gibba HOM05D005666 ORTHO05D007183 3.1e-68 263.1 281 50.5
EL10Ac1g01578 Beta vulgaris HOM05D005666 ORTHO05D007183 2.9e-66 256.5 291 47.4
HPP92_013793 Vanilla planifolia HOM05D005666 ORTHO05D007183 2.1e-64 250.4 325 45.2
DCAR_011253 Daucus carota HOM05D005666 ORTHO05D007183 3.5e-56 223.0 368 39.1
Mapoly0008s0195 Marchantia polymorpha HOM05D005666 ORTHO05D007183 2.2e-53 213.8 327 36.4
AagrBONN_evm.TU.Sc2ySwM_344.4982 Anthoceros agrestis HOM05D005666 ORTHO05D007183 2.0e-51 207.2 364 35.7
Pp3c22_6140 Physcomitrium patens HOM05D005666 ORTHO05D007183 2.9e-50 203.4 348 36.5
Actinidia16943 Actinidia chinensis HOM05D005666 ORTHO05D007183 1.1e-49 201.4 336 39.0
SMO134G0274 Selaginella moellendorffii HOM05D005666 ORTHO05D007183 2.7e-48 196.8 318 36.8
CARHR193820 Cardamine hirsuta HOM05D005666 ORTHO05D007183 6.1e-48 195.7 211 49.3
BcaB05g23370 Brassica carinata HOM05D005666 ORTHO05D007183 9.7e-38 161.8 316 38.0
CBR_g49194 Chara braunii HOM05D005666 ORTHO05D007183 4.8e-37 159.5 268 36.6
SHI16416 Sapria himalayana HOM05D005666 ORTHO05D007183 6.9e-36 155.6 263 38.0
THA.LOC109116951 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 1.6e-32 144.4 107 62.6
Oeu030978.1 Olea europaea HOM05D005666 ORTHO05D007183 1.7e-18 97.8 118 43.2
MCO10G117 Micromonas commoda HOM05D005666 ORTHO05D007183 1.8e-12 77.8 270 25.6
CiPaw.04G028500 Carya illinoinensis HOM05D005666 ORTHO05D007183 2.9e-10 70.5 63 60.3


User provided reference genes

Program Settings