Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0759G074 Amborella trichopoda HOM05D005589 ORTHO05D006948 2.2e-219 765.4 402 100.0
MBI05_g07866_MAGBIO Magnolia biondii HOM05D005589 ORTHO05D006948 2.0e-151 539.7 379 72.8
MD03G1103200 Malus domestica HOM05D005589 ORTHO05D006948 2.6e-151 539.3 399 68.2
Gohir.D05G098801 Gossypium hirsutum HOM05D005589 ORTHO05D006948 2.8e-150 535.8 394 69.3
Gohir.A05G098800 Gossypium hirsutum HOM05D005589 ORTHO05D006948 3.7e-150 535.4 394 69.3
Gorai.009G102500 Gossypium raimondii HOM05D005589 ORTHO05D006948 8.3e-150 534.3 394 69.0
Aqoxy2G01955 Aquilegia oxysepala HOM05D005589 ORTHO05D006948 2.4e-149 532.7 378 71.2
MD11G1116800 Malus domestica HOM05D005589 ORTHO05D006948 2.4e-149 532.7 399 67.4
TAR623G1588 Trochodendron aralioides HOM05D005589 ORTHO05D006948 9.2e-149 530.8 377 71.9
Dinv26284 Davidia involucrata HOM05D005589 ORTHO05D006948 1.0e-147 527.3 377 71.1
GSVIVG01025056001 Vitis vinifera HOM05D005589 ORTHO05D006948 1.3e-147 526.9 377 71.4
CSS0045601 Camellia sinensis var. sinensis HOM05D005589 ORTHO05D006948 1.7e-147 526.6 377 71.6
Prupe.6G087200 Prunus persica HOM05D005589 ORTHO05D006948 2.9e-147 525.8 410 66.1
Thecc.09G329900 Theobroma cacao HOM05D005589 ORTHO05D006948 1.9e-146 523.1 377 69.5
RcHm_v2.0_Chr5g0062341 Rosa chinensis HOM05D005589 ORTHO05D006948 2.5e-146 522.7 410 65.1
Cc01_g12110 Coffea canephora HOM05D005589 ORTHO05D006948 5.6e-146 521.5 401 68.3
Ciclev10027829m.g Citrus clementina HOM05D005589 ORTHO05D006948 7.3e-146 521.2 377 69.2
FvH4_3g34630 Fragaria vesca HOM05D005589 ORTHO05D006948 4.7e-145 518.5 377 68.7
PSO339G3114 Papaver somniferum HOM05D005589 ORTHO05D006948 6.1e-145 518.1 403 67.2
PSO384G0870 Papaver somniferum HOM05D005589 ORTHO05D006948 8.0e-145 517.7 377 70.3
FAN11G1618 Fragaria x ananassa HOM05D005589 ORTHO05D006948 1.0e-144 517.3 377 68.4
FAN25G3171 Fragaria x ananassa HOM05D005589 ORTHO05D006948 1.0e-144 517.3 410 64.9
Ah.08g215000 Amaranthus hybridus HOM05D005589 ORTHO05D006948 1.4e-144 516.9 393 69.2
EL10Ac7g15939 Beta vulgaris HOM05D005589 ORTHO05D006948 1.8e-144 516.5 377 70.3
Haze_24005 Corylus avellana HOM05D005589 ORTHO05D006948 3.0e-144 515.8 377 70.0
Atru.chr3.3796 Acer truncatum HOM05D005589 ORTHO05D006948 3.4e-143 512.3 377 68.7
AUR62001854 Chenopodium quinoa HOM05D005589 ORTHO05D006948 3.4e-143 512.3 377 70.0
AUR62009648 Chenopodium quinoa HOM05D005589 ORTHO05D006948 3.4e-143 512.3 377 70.0
Duzib168G1570 Durio zibethinus HOM05D005589 ORTHO05D006948 4.4e-143 511.9 377 68.4
FAN16G1588 Fragaria x ananassa HOM05D005589 ORTHO05D006948 4.4e-143 511.9 410 63.9
Cfa011427 Carpinus fangiana HOM05D005589 ORTHO05D006948 9.8e-143 510.8 377 69.2
Rhsim13G0088500 Rhododendron simsii HOM05D005589 ORTHO05D006948 1.3e-142 510.4 377 69.0
Hund05020 Selenicereus undatus HOM05D005589 ORTHO05D006948 1.7e-142 510.0 377 69.8
CANSAT54G1803 Cannabis sativa HOM05D005589 ORTHO05D006948 2.2e-142 509.6 373 69.7
FAN21G0436 Fragaria x ananassa HOM05D005589 ORTHO05D006948 3.7e-142 508.8 377 67.4
Peaxi162Scf00411g00711 Petunia axillaris HOM05D005589 ORTHO05D006948 6.4e-142 508.1 377 68.4
Sc21g0005390 Simmondsia chinensis HOM05D005589 ORTHO05D006948 6.4e-142 508.1 377 69.2
PGR119G2409 Punica granatum HOM05D005589 ORTHO05D006948 1.1e-141 507.3 377 67.9
CiPaw.13G101800 Carya illinoinensis HOM05D005589 ORTHO05D006948 1.4e-141 506.9 377 68.7
COL.COLO4_18425 Corchorus olitorius HOM05D005589 ORTHO05D006948 1.8e-141 506.5 355 71.8
Migut.D02148 Erythranthe guttata HOM05D005589 ORTHO05D006948 1.8e-141 506.5 377 69.2
TWI31G1338 Tripterygium wilfordii HOM05D005589 ORTHO05D006948 1.8e-141 506.5 377 69.2
Lj1A176T55 Lonicera japonica HOM05D005589 ORTHO05D006948 3.2e-141 505.8 403 66.3
Nitab4.5_0002684g0170 Nicotiana tabacum HOM05D005589 ORTHO05D006948 5.4e-141 505.0 377 67.9
Nitab4.5_0007030g0040 Nicotiana tabacum HOM05D005589 ORTHO05D006948 5.4e-141 505.0 377 67.9
Oeu040274.2 Olea europaea HOM05D005589 ORTHO05D006948 5.4e-141 505.0 385 68.3
DCAR_015589 Daucus carota HOM05D005589 ORTHO05D006948 9.2e-141 504.2 391 67.0
Eucgr.J02099 Eucalyptus grandis HOM05D005589 ORTHO05D006948 1.2e-140 503.8 377 68.2
CAN.G755.19 Capsicum annuum HOM05D005589 ORTHO05D006948 2.0e-140 503.1 377 68.2
HanXRQChr08g0228221 Helianthus annuus HOM05D005589 ORTHO05D006948 2.0e-140 503.1 400 63.2
Solyc11g072950.3 Solanum lycopersicum HOM05D005589 ORTHO05D006948 5.9e-140 501.5 388 66.5
Glyma.12G074800 Glycine max HOM05D005589 ORTHO05D006948 7.8e-140 501.1 375 68.0
Lsat_1_v5_gn_9_21601 Lactuca sativa HOM05D005589 ORTHO05D006948 7.8e-140 501.1 378 66.4
Lalb_Chr19g0137591 Lupinus albus HOM05D005589 ORTHO05D006948 1.0e-139 500.7 375 67.7
AT3G46220 Arabidopsis thaliana HOM05D005589 ORTHO05D006948 2.3e-139 499.6 379 67.8
Thhalv10002404m.g Eutrema salsugineum HOM05D005589 ORTHO05D006948 2.3e-139 499.6 379 66.5
THA.LOC104799457 Tarenaya hassleriana HOM05D005589 ORTHO05D006948 3.0e-139 499.2 379 66.2
MSTRG.21170 Avicennia marina HOM05D005589 ORTHO05D006948 5.0e-139 498.4 377 67.4
Sopen11g030610 Solanum pennellii HOM05D005589 ORTHO05D006948 5.0e-139 498.4 388 66.0
Ca_19212_v3 Cicer arietinum L. HOM05D005589 ORTHO05D006948 6.6e-139 498.0 375 68.3
CARHR154660 Cardamine hirsuta HOM05D005589 ORTHO05D006948 8.6e-139 497.7 379 67.0
AL5G25010 Arabidopsis lyrata HOM05D005589 ORTHO05D006948 1.5e-138 496.9 379 67.3
Sp5g15410 Schrenkiella parvula HOM05D005589 ORTHO05D006948 5.6e-138 495.0 379 66.5
Carub.0005s1206 Capsella rubella HOM05D005589 ORTHO05D006948 9.5e-138 494.2 379 67.0
Phvul.011G069300 Phaseolus vulgaris HOM05D005589 ORTHO05D006948 9.5e-138 494.2 375 67.7
PGSC0003DMG400015549 Solanum tuberosum HOM05D005589 ORTHO05D006948 9.5e-138 494.2 377 66.8
CsaV3_1G033840 Cucumis sativus L. HOM05D005589 ORTHO05D006948 1.6e-137 493.4 377 66.8
Lj3g0027543 Lotus japonicus HOM05D005589 ORTHO05D006948 1.6e-137 493.4 373 67.6
Sabra16G0140600 Salix brachista HOM05D005589 ORTHO05D006948 1.6e-137 493.4 385 67.0
A06p20980 Brassica napus HOM05D005589 ORTHO05D006948 2.1e-137 493.0 379 66.2
Potri.001G234300 Populus trichocarpa HOM05D005589 ORTHO05D006948 2.1e-137 493.0 378 68.3
SGA_v2.0_scaffold394G50722 Striga asiatica HOM05D005589 ORTHO05D006948 2.1e-137 493.0 373 67.6
VMungo1127G2244 Vigna mungo HOM05D005589 ORTHO05D006948 2.1e-137 493.0 375 67.5
C03p70540 Brassica napus HOM05D005589 ORTHO05D006948 2.8e-137 492.7 379 66.2
CSS0023618 Camellia sinensis var. sinensis HOM05D005589 ORTHO05D006948 3.6e-137 492.3 377 68.4
ECA247G1976 Erigeron canadensis HOM05D005589 ORTHO05D006948 4.7e-137 491.9 378 65.3
MELO3C020678.2 Cucumis melo HOM05D005589 ORTHO05D006948 1.4e-136 490.3 377 66.6
Psat7g220760 Pisum sativum HOM05D005589 ORTHO05D006948 1.4e-136 490.3 381 65.9
Zm00001eb266020 Zea mays HOM05D005589 ORTHO05D006948 2.3e-136 489.6 377 64.5
Aa31LG4G15320 Aethionema arabicum HOM05D005589 ORTHO05D006948 4.0e-136 488.8 379 66.5
ClCG03G001750 Citrullus lanatus HOM05D005589 ORTHO05D006948 4.0e-136 488.8 377 66.3
Os05g0117600 Oryza sativa ssp. japonica HOM05D005589 ORTHO05D006948 8.9e-136 487.6 377 64.5
BraA06t25186Z Brassica rapa HOM05D005589 ORTHO05D006948 5.8e-135 485.0 393 64.1
Sed0009383 Sechium edule HOM05D005589 ORTHO05D006948 3.7e-134 482.3 377 65.5
BolC3t19334H Brassica oleracea HOM05D005589 ORTHO05D006948 8.3e-134 481.1 393 63.6
arahy.Tifrunner.gnm1.ann1.3ELA68 Arachis hypogaea HOM05D005589 ORTHO05D006948 1.2e-132 477.2 447 59.3
TPR.G2986 Trifolium pratense HOM05D005589 ORTHO05D006948 3.5e-132 475.7 380 65.3
SalBow3G3271 Salvia bowleyana HOM05D005589 ORTHO05D006948 3.1e-128 462.6 329 72.0
vmacro03127 Vaccinium macrocarpon HOM05D005589 ORTHO05D006948 1.2e-127 460.7 378 63.5
Medtr4g062090 Medicago truncatula HOM05D005589 ORTHO05D006948 1.6e-121 440.3 378 63.2
HPP92_025619 Vanilla planifolia HOM05D005589 ORTHO05D006948 2.0e-119 433.3 422 54.0
Hma1.2p1_0846F.1_g227810 Hydrangea macrophylla HOM05D005589 ORTHO05D006948 3.8e-118 429.1 314 68.2
Manes.04G029200 Manihot esculenta HOM05D005589 ORTHO05D006948 1.7e-115 420.2 311 66.9
SMO196G0111 Selaginella moellendorffii HOM05D005589 ORTHO05D006948 6.2e-113 411.8 384 55.2
AagrBONN_evm.TU.Sc2ySwM_228.2492 Anthoceros agrestis HOM05D005589 ORTHO05D006948 1.1e-106 391.0 381 51.2
unitig_37.g12679 Utricularia gibba HOM05D005589 ORTHO05D006948 2.5e-106 389.8 377 57.0
Thhalv10002414m.g Eutrema salsugineum HOM05D005589 ORTHO05D006948 3.6e-105 386.0 379 55.7
Pp3c8_20630 Physcomitrium patens HOM05D005589 ORTHO05D006948 4.0e-104 382.5 382 51.6
Actinidia37259 Actinidia chinensis HOM05D005589 ORTHO05D006948 3.5e-100 369.4 268 67.9
CDE02G1253 Ceratophyllum demersum HOM05D005589 ORTHO05D006948 2.1e-97 360.1 255 70.2
SEGI_37108 Sequoiadendron giganteum HOM05D005589 ORTHO05D006948 6.2e-97 358.6 275 64.7
CBR_g29437 Chara braunii HOM05D005589 ORTHO05D006948 2.2e-94 350.1 379 48.0
CBR_g777 Chara braunii HOM05D005589 ORTHO05D006948 5.1e-91 339.0 403 45.7
Cpa.g.sc252.12 Carica papaya HOM05D005589 ORTHO05D006948 1.6e-89 334.0 395 51.6
AL1G56500 Arabidopsis lyrata HOM05D005589 ORTHO05D006948 7.9e-84 315.1 384 49.2
Glyma.11G145645 Glycine max HOM05D005589 ORTHO05D006948 2.7e-76 290.0 222 65.3
Mapoly0007s0143 Marchantia polymorpha HOM05D005589 ORTHO05D006948 3.8e-70 269.6 373 43.2
Cre16.g686650 Chlamydomonas reinhardtii HOM05D005589 ORTHO05D006948 6.3e-57 225.7 416 34.6
Actinidia07078 Actinidia chinensis HOM05D005589 ORTHO05D006948 1.7e-49 201.1 160 60.0
arahy.Tifrunner.gnm1.ann1.0DF5JX Arachis hypogaea HOM05D005589 ORTHO05D006948 2.0e-47 194.1 197 57.4
CSS0011793 Camellia sinensis var. sinensis HOM05D005589 ORTHO05D006948 5.7e-34 149.4 161 51.6
arahy.Tifrunner.gnm1.ann1.KKDX05 Arachis hypogaea HOM05D001394 ORTHO05D001237 3.8e-30 136.7 93 69.9
PRCOL_00006228 Prasinoderma coloniale HOM05D005589 ORTHO05D006948 2.6e-26 124.0 353 25.8
arahy.Tifrunner.gnm1.ann1.HF8MSC Arachis hypogaea HOM05D005589 ORTHO05D006948 4.9e-25 119.8 110 56.4
BcaC01g01924 Brassica carinata HOM05D005589 ORTHO05D006948 5.0e-22 109.8 104 53.8
arahy.Tifrunner.gnm1.ann1.NIGF9J Arachis hypogaea HOM05D001394 ORTHO05D001237 2.8e-20 104.0 69 72.5
Actinidia37258 Actinidia chinensis HOM05D005589 ORTHO05D006948 1.1e-19 102.1 69 79.7
Gohir.D08G115100 Gossypium hirsutum HOM05D005589 ORTHO05D047064 4.9e-17 93.2 70 64.3
Gorai.004G124000 Gossypium raimondii HOM05D005589 ORTHO05D047064 4.9e-17 93.2 70 64.3
SEGI_32388 Sequoiadendron giganteum HOM05D005589 ORTHO05D006948 9.2e-16 89.0 61 77.0
arahy.Tifrunner.gnm1.ann1.LY30IG Arachis hypogaea HOM05D005589 ORTHO05D006948 1.9e-08 64.7 69 53.6


User provided reference genes

Program Settings