Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0759G057 Amborella trichopoda HOM05D005589 ORTHO05D006948 2.3e-91 339.0 178 100.0
PSO339G3114 Papaver somniferum HOM05D005589 ORTHO05D006948 3.0e-35 152.5 101 77.2
Actinidia07078 Actinidia chinensis HOM05D005589 ORTHO05D006948 4.3e-34 148.7 101 74.3
PSO384G0870 Papaver somniferum HOM05D005589 ORTHO05D006948 4.3e-34 148.7 101 75.2
GSVIVG01025056001 Vitis vinifera HOM05D005589 ORTHO05D006948 4.3e-34 148.7 99 74.7
CSS0023618 Camellia sinensis var. sinensis HOM05D005589 ORTHO05D006948 1.3e-33 147.1 101 74.3
CSS0045601 Camellia sinensis var. sinensis HOM05D005589 ORTHO05D006948 1.3e-33 147.1 101 74.3
Lalb_Chr19g0137591 Lupinus albus HOM05D005589 ORTHO05D006948 2.2e-33 146.4 105 73.3
PGR119G2409 Punica granatum HOM05D005589 ORTHO05D006948 3.7e-33 145.6 101 73.3
Rhsim13G0088500 Rhododendron simsii HOM05D005589 ORTHO05D006948 3.7e-33 145.6 101 73.3
Sc21g0005380 Simmondsia chinensis HOM05D005589 ORTHO05D006948 3.7e-33 145.6 102 72.5
vmacro03127 Vaccinium macrocarpon HOM05D005589 ORTHO05D006948 3.7e-33 145.6 101 73.3
Dinv26284 Davidia involucrata HOM05D005589 ORTHO05D006948 4.8e-33 145.2 98 74.5
TWI31G1338 Tripterygium wilfordii HOM05D005589 ORTHO05D006948 4.8e-33 145.2 101 74.3
Duzib168G1570 Durio zibethinus HOM05D005589 ORTHO05D006948 1.8e-32 143.3 101 72.3
Cfa011427 Carpinus fangiana HOM05D005589 ORTHO05D006948 2.4e-32 142.9 103 71.8
Haze_24005 Corylus avellana HOM05D005589 ORTHO05D006948 2.4e-32 142.9 103 71.8
Aqoxy2G01955 Aquilegia oxysepala HOM05D005589 ORTHO05D006948 3.1e-32 142.5 101 70.3
Nitab4.5_0007030g0040 Nicotiana tabacum HOM05D005589 ORTHO05D006948 3.1e-32 142.5 101 71.3
Sed0009383 Sechium edule HOM05D005589 ORTHO05D006948 3.1e-32 142.5 101 71.3
Ciclev10027829m.g Citrus clementina HOM05D005589 ORTHO05D006948 4.1e-32 142.1 101 73.3
Hma1.2p1_0846F.1_g227810 Hydrangea macrophylla HOM05D005589 ORTHO05D006948 4.1e-32 142.1 101 71.3
Hma1.2p1_0846F.1_g227820 Hydrangea macrophylla HOM05D005589 ORTHO05D006948 4.1e-32 142.1 101 71.3
CAN.G755.19 Capsicum annuum HOM05D005589 ORTHO05D006948 5.3e-32 141.7 101 72.3
COL.COLO4_18425 Corchorus olitorius HOM05D005589 ORTHO05D006948 5.3e-32 141.7 101 71.3
Eucgr.J02099 Eucalyptus grandis HOM05D005589 ORTHO05D006948 5.3e-32 141.7 101 71.3
Peaxi162Scf00411g00711 Petunia axillaris HOM05D005589 ORTHO05D006948 5.3e-32 141.7 101 72.3
Lj3g0027543 Lotus japonicus HOM05D005589 ORTHO05D006948 6.9e-32 141.4 105 70.5
Manes.04G029200 Manihot esculenta HOM05D005589 ORTHO05D006948 6.9e-32 141.4 101 70.3
Potri.001G234300 Populus trichocarpa HOM05D005589 ORTHO05D006948 6.9e-32 141.4 101 72.3
ClCG03G001750 Citrullus lanatus HOM05D005589 ORTHO05D006948 1.2e-31 140.6 101 71.3
Solyc11g072950.3 Solanum lycopersicum HOM05D005589 ORTHO05D006948 1.5e-31 140.2 101 70.3
EL10Ac7g15939 Beta vulgaris HOM05D005589 ORTHO05D006948 2.0e-31 139.8 101 69.3
Gohir.A05G098800 Gossypium hirsutum HOM05D005589 ORTHO05D006948 2.0e-31 139.8 101 70.3
Gohir.D05G098801 Gossypium hirsutum HOM05D005589 ORTHO05D006948 2.0e-31 139.8 101 70.3
Gorai.009G102500 Gossypium raimondii HOM05D005589 ORTHO05D006948 2.0e-31 139.8 101 70.3
Atru.chr3.3796 Acer truncatum HOM05D005589 ORTHO05D006948 2.6e-31 139.4 101 69.3
Ah.08g215000 Amaranthus hybridus HOM05D005589 ORTHO05D006948 2.6e-31 139.4 101 69.3
PGSC0003DMG400015549 Solanum tuberosum HOM05D005589 ORTHO05D006948 2.6e-31 139.4 101 69.3
Lj1A176T55 Lonicera japonica HOM05D005589 ORTHO05D006948 3.4e-31 139.0 101 66.3
Thecc.09G329900 Theobroma cacao HOM05D005589 ORTHO05D006948 4.5e-31 138.7 101 69.3
MD03G1103200 Malus domestica HOM05D005589 ORTHO05D006948 5.9e-31 138.3 101 68.3
SGA_v2.0_scaffold394G50722 Striga asiatica HOM05D005589 ORTHO05D006948 5.9e-31 138.3 101 70.3
Migut.D02148 Erythranthe guttata HOM05D005589 ORTHO05D006948 7.6e-31 137.9 101 70.3
Sopen11g030610 Solanum pennellii HOM05D005589 ORTHO05D006948 1.0e-30 137.5 101 69.3
CiPaw.13G101800 Carya illinoinensis HOM05D005589 ORTHO05D006948 1.3e-30 137.1 101 68.3
arahy.Tifrunner.gnm1.ann1.0DF5JX Arachis hypogaea HOM05D005589 ORTHO05D006948 1.7e-30 136.7 101 72.3
arahy.Tifrunner.gnm1.ann1.3ELA68 Arachis hypogaea HOM05D005589 ORTHO05D006948 1.7e-30 136.7 101 72.3
Thhalv10002404m.g Eutrema salsugineum HOM05D005589 ORTHO05D006948 1.7e-30 136.7 101 69.3
AL5G25010 Arabidopsis lyrata HOM05D005589 ORTHO05D006948 2.2e-30 136.3 101 70.3
MELO3C020678.2 Cucumis melo HOM05D005589 ORTHO05D006948 2.2e-30 136.3 101 68.3
ECA247G1976 Erigeron canadensis HOM05D005589 ORTHO05D006948 2.2e-30 136.3 101 68.3
Nitab4.5_0002684g0170 Nicotiana tabacum HOM05D005589 ORTHO05D006948 2.2e-30 136.3 101 69.3
CANSAT54G1803 Cannabis sativa HOM05D005589 ORTHO05D006948 2.9e-30 136.0 101 69.3
Thhalv10002414m.g Eutrema salsugineum HOM05D005589 ORTHO05D006948 2.9e-30 136.0 101 68.3
THA.LOC104799457 Tarenaya hassleriana HOM05D005589 ORTHO05D006948 2.9e-30 136.0 100 71.0
Carub.0005s1206 Capsella rubella HOM05D005589 ORTHO05D006948 3.8e-30 135.6 101 68.3
MBI05_g07866_MAGBIO Magnolia biondii HOM05D005589 ORTHO05D006948 3.8e-30 135.6 121 63.6
TPR.G2986 Trifolium pratense HOM05D005589 ORTHO05D006948 3.8e-30 135.6 101 72.3
CARHR154660 Cardamine hirsuta HOM05D005589 ORTHO05D006948 5.0e-30 135.2 101 69.3
CsaV3_1G033840 Cucumis sativus L. HOM05D005589 ORTHO05D006948 6.5e-30 134.8 101 68.3
BcaC01g01924 Brassica carinata HOM05D005589 ORTHO05D006948 8.5e-30 134.4 101 68.3
FAN16G1588 Fragaria x ananassa HOM05D005589 ORTHO05D006948 8.5e-30 134.4 101 66.3
FAN21G0436 Fragaria x ananassa HOM05D005589 ORTHO05D006948 8.5e-30 134.4 101 66.3
Glyma.12G074800 Glycine max HOM05D005589 ORTHO05D006948 8.5e-30 134.4 105 67.6
Oeu040274.2 Olea europaea HOM05D005589 ORTHO05D006948 8.5e-30 134.4 101 67.3
Sp5g15410 Schrenkiella parvula HOM05D005589 ORTHO05D006948 8.5e-30 134.4 101 67.3
AT3G46220 Arabidopsis thaliana HOM05D005589 ORTHO05D006948 1.1e-29 134.0 101 67.3
Ca_19212_v3 Cicer arietinum L. HOM05D005589 ORTHO05D006948 1.1e-29 134.0 101 71.3
Glyma.11G145645 Glycine max HOM05D005589 ORTHO05D006948 1.1e-29 134.0 105 68.6
HanXRQChr08g0228221 Helianthus annuus HOM05D005589 ORTHO05D006948 1.1e-29 134.0 101 66.3
Hund05020 Selenicereus undatus HOM05D005589 ORTHO05D006948 1.1e-29 134.0 99 68.7
MD11G1116800 Malus domestica HOM05D005589 ORTHO05D006948 1.4e-29 133.7 99 68.7
Prupe.6G087200 Prunus persica HOM05D005589 ORTHO05D006948 1.4e-29 133.7 104 64.4
A06p20980 Brassica napus HOM05D005589 ORTHO05D006948 1.9e-29 133.3 101 68.3
DCAR_015589 Daucus carota HOM05D005589 ORTHO05D006948 1.9e-29 133.3 101 67.3
C03p70540 Brassica napus HOM05D005589 ORTHO05D006948 2.5e-29 132.9 101 67.3
BolC3t19334H Brassica oleracea HOM05D005589 ORTHO05D006948 2.5e-29 132.9 101 67.3
Cc01_g12110 Coffea canephora HOM05D005589 ORTHO05D006948 2.5e-29 132.9 96 67.7
FvH4_3g34630 Fragaria vesca HOM05D005589 ORTHO05D006948 2.5e-29 132.9 101 65.3
FAN11G1618 Fragaria x ananassa HOM05D005589 ORTHO05D006948 2.5e-29 132.9 101 65.3
Aa31LG4G15320 Aethionema arabicum HOM05D005589 ORTHO05D006948 3.2e-29 132.5 101 68.3
Medtr4g062090 Medicago truncatula HOM05D005589 ORTHO05D006948 4.2e-29 132.1 101 70.3
HPP92_025619 Vanilla planifolia HOM05D005589 ORTHO05D006948 4.2e-29 132.1 101 67.3
RcHm_v2.0_Chr5g0062341 Rosa chinensis HOM05D005589 ORTHO05D006948 5.5e-29 131.7 101 65.3
MSTRG.21170 Avicennia marina HOM05D005589 ORTHO05D006948 7.2e-29 131.3 101 68.3
SalBow3G0177 Salvia bowleyana HOM05D005589 ORTHO05D006948 1.2e-28 130.6 101 66.3
Phvul.011G069300 Phaseolus vulgaris HOM05D005589 ORTHO05D006948 1.6e-28 130.2 105 65.7
BcaB01g01018 Brassica carinata HOM05D005589 ORTHO05D006948 2.1e-28 129.8 101 65.3
BraA06t25186Z Brassica rapa HOM05D005589 ORTHO05D006948 2.1e-28 129.8 101 67.3
unitig_37.g12679 Utricularia gibba HOM05D005589 ORTHO05D006948 3.6e-28 129.0 98 67.3
FAN25G3171 Fragaria x ananassa HOM05D005589 ORTHO05D006948 2.3e-27 126.3 101 63.4
Psat7g220760 Pisum sativum HOM05D005589 ORTHO05D006948 3.0e-27 125.9 97 69.1
Sabra16G0140600 Salix brachista HOM05D005589 ORTHO05D006948 3.0e-27 125.9 149 51.7
VMungo1127G2244 Vigna mungo HOM05D005589 ORTHO05D006948 3.9e-27 125.6 105 62.9
Zm00001eb266020 Zea mays HOM05D005589 ORTHO05D006948 5.1e-27 125.2 101 64.4
Lsat_1_v5_gn_9_21601 Lactuca sativa HOM05D005589 ORTHO05D006948 6.7e-27 124.8 101 61.4
CSS0044614 Camellia sinensis var. sinensis HOM05D005589 ORTHO05D006948 5.7e-26 121.7 101 64.4
Os05g0117600 Oryza sativa ssp. japonica HOM05D005589 ORTHO05D006948 7.4e-26 121.3 101 60.4
TAR623G1588 Trochodendron aralioides HOM05D005589 ORTHO05D006948 1.2e-23 114.0 70 84.3
AL1G56480 Arabidopsis lyrata HOM05D005589 ORTHO05D006948 3.4e-23 112.5 101 60.4
Pp3c8_20630 Physcomitrium patens HOM05D005589 ORTHO05D006948 1.3e-22 110.5 99 60.6
Mapoly0007s0143 Marchantia polymorpha HOM05D005589 ORTHO05D006948 1.7e-22 110.2 98 59.2
AUR62009648 Chenopodium quinoa HOM05D005589 ORTHO05D006948 2.5e-21 106.3 79 65.8
AUR62001854 Chenopodium quinoa HOM05D005589 ORTHO05D006948 9.4e-21 104.4 78 65.4
SMO196G0111 Selaginella moellendorffii HOM05D005589 ORTHO05D006948 6.1e-20 101.7 97 53.6
CBR_g777 Chara braunii HOM05D005589 ORTHO05D006948 1.1e-18 97.4 91 52.7
AagrBONN_evm.TU.Sc2ySwM_228.2492 Anthoceros agrestis HOM05D005589 ORTHO05D006948 5.7e-18 95.1 70 71.4
Cpa.g.sc252.12 Carica papaya HOM05D005589 ORTHO05D006948 3.4e-15 85.9 101 48.5
CDE02G0022 Ceratophyllum demersum HOM05D005589 ORTHO05D006948 8.2e-09 64.7 47 70.2
CBR_g29437 Chara braunii HOM05D005589 ORTHO05D006948 2.4e-08 63.2 90 40.0
PRCOL_00006228 Prasinoderma coloniale HOM05D005589 ORTHO05D006948 4.5e-07 58.9 128 31.2


User provided reference genes

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