Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0759G055 Amborella trichopoda HOM05D006681 ORTHO05D008338 1.7e-156 555.8 264 100.0
TAR633G1649 Trochodendron aralioides HOM05D006681 ORTHO05D008338 1.2e-61 240.7 164 68.3
Nn2g10531 Nelumbo nucifera HOM05D006681 ORTHO05D008338 4.7e-61 238.8 160 68.1
MBI14_g35939_MAGBIO Magnolia biondii HOM05D006681 ORTHO05D008338 1.1e-60 237.7 172 64.5
Cpa.g.sc2126.1 Carica papaya HOM05D006681 ORTHO05D008338 1.2e-59 234.2 158 66.5
FAN16G0358 Fragaria x ananassa HOM05D006681 ORTHO05D008338 3.4e-59 232.6 161 67.7
Sed0010670 Sechium edule HOM05D006681 ORTHO05D008338 1.7e-58 230.3 172 61.6
Duzib168G1095 Durio zibethinus HOM05D006681 ORTHO05D008338 8.3e-58 228.0 179 62.0
Os05g0117500 Oryza sativa ssp. japonica HOM05D006681 ORTHO05D008338 8.3e-58 228.0 167 62.9
Cc01_g12140 Coffea canephora HOM05D006681 ORTHO05D008338 1.1e-57 227.6 160 66.9
FvH4_3g34680 Fragaria vesca HOM05D006681 ORTHO05D008338 1.4e-57 227.3 159 66.7
FAN11G3596 Fragaria x ananassa HOM05D006681 ORTHO05D008338 1.4e-57 227.3 159 66.7
THA.LOC104814870 Tarenaya hassleriana HOM05D006681 ORTHO05D008338 1.4e-57 227.3 162 64.8
Ca_19209_v3 Cicer arietinum L. HOM05D006681 ORTHO05D008338 1.9e-57 226.9 167 62.3
COL.COLO4_18427 Corchorus olitorius HOM05D006681 ORTHO05D008338 1.9e-57 226.9 178 60.7
Medtr4g062130 Medicago truncatula HOM05D006681 ORTHO05D008338 3.2e-57 226.1 167 63.5
PSO339G5789 Papaver somniferum HOM05D006681 ORTHO05D008338 3.2e-57 226.1 164 65.2
AL5G24960 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 4.1e-57 225.7 163 62.6
Eucgr.J02098 Eucalyptus grandis HOM05D006681 ORTHO05D008338 4.1e-57 225.7 185 57.3
RcHm_v2.0_Chr5g0062361 Rosa chinensis HOM05D006681 ORTHO05D008338 4.1e-57 225.7 159 66.0
GSVIVG01025054001 Vitis vinifera HOM05D006681 ORTHO05D008338 4.1e-57 225.7 181 58.6
HPP92_006593 Vanilla planifolia HOM05D006681 ORTHO05D008338 7.1e-57 224.9 169 60.9
Cfa011429 Carpinus fangiana HOM05D006681 ORTHO05D008338 9.2e-57 224.6 167 63.5
Aqoxy4G03072 Aquilegia oxysepala HOM05D006681 ORTHO05D008338 1.2e-56 224.2 169 60.9
AT3G46200 Arabidopsis thaliana HOM05D006681 ORTHO05D008338 1.2e-56 224.2 163 62.6
Dinv32860 Davidia involucrata HOM05D006681 ORTHO05D008338 2.1e-56 223.4 160 64.4
PSO384G0101 Papaver somniferum HOM05D006681 ORTHO05D008338 2.1e-56 223.4 164 64.6
Prupe.6G086900 Prunus persica HOM05D006681 ORTHO05D008338 2.1e-56 223.4 159 63.5
Thecc.09G329700 Theobroma cacao HOM05D006681 ORTHO05D008338 3.5e-56 222.6 178 59.6
Duzib170G0311 Durio zibethinus HOM05D006681 ORTHO05D008338 4.6e-56 222.2 177 59.3
Glyma.12G075000 Glycine max HOM05D006681 ORTHO05D008338 4.6e-56 222.2 166 62.0
Gohir.A05G098700 Gossypium hirsutum HOM05D006681 ORTHO05D008338 4.6e-56 222.2 178 59.0
CsaV3_6G022080 Cucumis sativus L. HOM05D006681 ORTHO05D008338 6.0e-56 221.9 163 62.0
MD11G1116600 Malus domestica HOM05D006681 ORTHO05D008338 6.0e-56 221.9 159 64.2
EL10Ac7g15941 Beta vulgaris HOM05D006681 ORTHO05D008338 7.8e-56 221.5 157 62.4
CiPaw.13G101600 Carya illinoinensis HOM05D006681 ORTHO05D008338 7.8e-56 221.5 159 63.5
Oeu040277.1 Olea europaea HOM05D006681 ORTHO05D008338 7.8e-56 221.5 158 64.6
Ciclev10028948m.g Citrus clementina HOM05D006681 ORTHO05D008338 1.3e-55 220.7 160 65.0
Thhalv10002615m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 1.3e-55 220.7 162 62.3
Gorai.009G102400 Gossypium raimondii HOM05D006681 ORTHO05D008338 1.3e-55 220.7 178 58.4
arahy.Tifrunner.gnm1.ann1.SK7GFS Arachis hypogaea HOM05D006681 ORTHO05D008338 1.7e-55 220.3 162 63.6
Atru.chr3.3798 Acer truncatum HOM05D006681 ORTHO05D008338 2.3e-55 219.9 159 65.4
arahy.Tifrunner.gnm1.ann1.FZI6FG Arachis hypogaea HOM05D006681 ORTHO05D008338 2.3e-55 219.9 162 63.0
Potri.009G026700 Populus trichocarpa HOM05D006681 ORTHO05D008338 2.3e-55 219.9 157 64.3
QL01p034239 Quercus lobata HOM05D006681 ORTHO05D008338 3.0e-55 219.5 159 63.5
TPR.G3006 Trifolium pratense HOM05D006681 ORTHO05D008338 3.9e-55 219.2 167 62.3
Gohir.D05G098750 Gossypium hirsutum HOM05D006681 ORTHO05D008338 5.1e-55 218.8 178 57.9
Sabra09G0017800 Salix brachista HOM05D006681 ORTHO05D008338 6.6e-55 218.4 157 63.7
Carub.0005s1203 Capsella rubella HOM05D006681 ORTHO05D008338 8.6e-55 218.0 165 61.8
AUR62009646 Chenopodium quinoa HOM05D006681 ORTHO05D008338 8.6e-55 218.0 166 59.0
AUR62001852 Chenopodium quinoa HOM05D006681 ORTHO05D008338 1.5e-54 217.2 159 61.6
Zm00001eb266060 Zea mays HOM05D006681 ORTHO05D008338 1.5e-54 217.2 165 61.2
HanXRQChr05g0134071 Helianthus annuus HOM05D006681 ORTHO05D008338 2.5e-54 216.5 177 58.8
Psat7g220640 Pisum sativum HOM05D006681 ORTHO05D008338 2.5e-54 216.5 167 60.5
CSS0007914 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 4.3e-54 215.7 157 61.8
TWI31G0387 Tripterygium wilfordii HOM05D006681 ORTHO05D008338 4.3e-54 215.7 164 63.4
SGA_v2.0_scaffold134G34764 Striga asiatica HOM05D006681 ORTHO05D008338 5.6e-54 215.3 162 61.1
CSS0025304 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 7.3e-54 214.9 157 61.8
ECA236G1321 Erigeron canadensis HOM05D006681 ORTHO05D008338 7.3e-54 214.9 158 62.7
Aa31LG4G15300 Aethionema arabicum HOM05D006681 ORTHO05D008338 1.6e-53 213.8 182 57.7
Migut.D02146 Erythranthe guttata HOM05D006681 ORTHO05D008338 2.1e-53 213.4 160 59.4
Lalb_Chr03g0026931 Lupinus albus HOM05D006681 ORTHO05D008338 2.1e-53 213.4 164 60.4
Phvul.011G069100 Phaseolus vulgaris HOM05D006681 ORTHO05D008338 2.1e-53 213.4 167 60.5
Solyc11g072970.2 Solanum lycopersicum HOM05D006681 ORTHO05D008338 4.7e-53 212.2 159 62.3
Carub.0003s2829 Capsella rubella HOM05D006681 ORTHO05D008338 6.2e-53 211.8 165 60.6
Lj3g0002575 Lotus japonicus HOM05D006681 ORTHO05D008338 8.1e-53 211.5 164 62.2
PGSC0003DMG400015551 Solanum tuberosum HOM05D006681 ORTHO05D008338 8.1e-53 211.5 159 62.3
MSTRG.18607 Avicennia marina HOM05D006681 ORTHO05D008338 1.1e-52 211.1 160 59.4
CAN.G1647.1 Capsicum annuum HOM05D006681 ORTHO05D008338 1.4e-52 210.7 163 61.3
Lsat_1_v5_gn_8_78740 Lactuca sativa HOM05D006681 ORTHO05D008338 2.3e-52 209.9 178 55.1
FAN21G0481 Fragaria x ananassa HOM05D006681 ORTHO05D008338 3.1e-52 209.5 185 56.8
Sopen11g030630 Solanum pennellii HOM05D006681 ORTHO05D008338 5.2e-52 208.8 159 61.0
VMungo1127G1059 Vigna mungo HOM05D006681 ORTHO05D008338 6.8e-52 208.4 191 54.5
Sp5g15430 Schrenkiella parvula HOM05D006681 ORTHO05D008338 3.4e-51 206.1 164 60.4
CANSAT54G2145 Cannabis sativa HOM05D006681 ORTHO05D008338 4.4e-51 205.7 166 57.2
SMO367G0798 Selaginella moellendorffii HOM05D006681 ORTHO05D008338 5.8e-51 205.3 160 60.6
BcaC01g01926 Brassica carinata HOM05D006681 ORTHO05D008338 9.9e-51 204.5 159 60.4
Peaxi162Scf00411g00068 Petunia axillaris HOM05D006681 ORTHO05D008338 9.9e-51 204.5 163 59.5
C03p70520 Brassica napus HOM05D006681 ORTHO05D008338 2.2e-50 203.4 159 60.4
BolC3t19336H Brassica oleracea HOM05D006681 ORTHO05D008338 2.2e-50 203.4 159 60.4
ClCG02G020630 Citrullus lanatus HOM05D006681 ORTHO05D008338 2.9e-50 203.0 219 48.9
SalBow3G4078 Salvia bowleyana HOM05D006681 ORTHO05D008338 3.7e-50 202.6 158 57.0
BraA06t25188Z Brassica rapa HOM05D006681 ORTHO05D008338 6.4e-50 201.8 159 60.4
A06p21000 Brassica napus HOM05D006681 ORTHO05D008338 8.4e-50 201.4 159 60.4
Pp3c11_23040 Physcomitrium patens HOM05D006681 ORTHO05D008338 1.4e-49 200.7 179 53.6
DCAR_006014 Daucus carota HOM05D006681 ORTHO05D008338 1.9e-49 200.3 180 53.3
Rhsim13G0088300 Rhododendron simsii HOM05D006681 ORTHO05D008338 2.4e-49 199.9 163 58.9
PGR119G1802 Punica granatum HOM05D006681 ORTHO05D008338 1.6e-48 197.2 176 55.1
Hund05017 Selenicereus undatus HOM05D006681 ORTHO05D008338 7.3e-46 188.3 164 53.0
FAN25G3219 Fragaria x ananassa HOM05D006681 ORTHO05D008338 9.6e-46 188.0 159 57.9
AagrBONN_evm.TU.Sc2ySwM_228.1772 Anthoceros agrestis HOM05D006681 ORTHO05D008338 1.1e-44 184.5 159 56.6
Mapoly0128s0008 Marchantia polymorpha HOM05D006681 ORTHO05D008338 8.9e-44 181.4 158 53.2
Manes.11G136100 Manihot esculenta HOM05D006681 ORTHO05D008338 2.9e-42 176.4 178 52.2
Nitab4.5_0002684g0160 Nicotiana tabacum HOM05D006681 ORTHO05D008338 5.4e-41 172.2 168 54.2
Nitab4.5_0002684g0190 Nicotiana tabacum HOM05D006681 ORTHO05D008338 7.1e-41 171.8 163 54.0
Thhalv10002633m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 1.7e-39 167.2 162 50.6
AL1G56400 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 4.3e-38 162.5 123 61.0
CBR_g415 Chara braunii HOM05D006681 ORTHO05D008338 4.3e-38 162.5 186 45.7
Ah.08g214980 Amaranthus hybridus HOM05D006681 ORTHO05D008338 2.1e-37 160.2 160 48.8
MELO3C013668.2 Cucumis melo HOM05D006681 ORTHO05D008338 4.8e-37 159.1 163 50.3
Lj1A175T11 Lonicera japonica HOM05D006681 ORTHO05D008338 9.0e-36 154.8 158 53.2
Sc06g0008200 Simmondsia chinensis HOM05D006681 ORTHO05D008338 2.0e-35 153.7 112 59.8
vmacro03125 Vaccinium macrocarpon HOM05D006681 ORTHO05D008338 1.1e-33 147.9 162 52.5
Nitab4.5_0001953g0020 Nicotiana tabacum HOM05D006681 ORTHO05D008338 2.3e-31 140.2 123 56.9
Lj3g0011020 Lotus japonicus HOM05D006681 ORTHO05D008338 5.1e-31 139.0 115 58.3
Nitab4.5_0001953g0050 Nicotiana tabacum HOM05D006681 ORTHO05D008338 9.6e-30 134.8 143 49.0
Glyma.11G145018 Glycine max HOM05D006681 ORTHO05D008338 6.9e-28 128.6 115 50.4
Haze_24007 Corylus avellana HOM05D006681 ORTHO05D008338 2.9e-26 123.2 115 53.9
MCO11G760 Micromonas commoda HOM05D006681 ORTHO05D008338 2.5e-14 83.6 153 30.7
PRCOL_00001211 Prasinoderma coloniale HOM05D006681 ORTHO05D008338 3.7e-13 79.7 230 25.7
Sc06g0008190 Simmondsia chinensis HOM05D006681 ORTHO05D008338 8.2e-13 78.6 50 66.0
Pp3c11_23047 Physcomitrium patens HOM05D006681 ORTHO05D008338 5.3e-12 75.9 65 58.5
CAN.G1289.2 Capsicum annuum HOM05D006681 ORTHO05D008338 6.9e-12 75.5 52 65.4
SEGI_27570 Sequoiadendron giganteum HOM05D006681 ORTHO05D008338 9.0e-12 75.1 44 72.7
Actinidia20468 Actinidia chinensis HOM05D006681 ORTHO05D008338 1.5e-11 74.3 60 58.3
CARHR154620 Cardamine hirsuta HOM05D006681 ORTHO05D008338 3.9e-07 59.7 47 57.4


User provided reference genes

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