Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0759G002 Amborella trichopoda HOM05D005589 ORTHO05D006948 4.2e-125 451.4 237 100.0
TAR623G1588 Trochodendron aralioides HOM05D005589 ORTHO05D006948 4.0e-43 179.1 220 50.5
MBI05_g07866_MAGBIO Magnolia biondii HOM05D005589 ORTHO05D006948 2.9e-41 172.9 240 49.2
FAN21G0436 Fragaria x ananassa HOM05D005589 ORTHO05D006948 3.2e-40 169.5 239 43.1
FAN16G1588 Fragaria x ananassa HOM05D005589 ORTHO05D006948 5.4e-40 168.7 239 42.7
FAN25G3171 Fragaria x ananassa HOM05D005589 ORTHO05D006948 1.6e-39 167.2 245 42.4
CiPaw.13G101800 Carya illinoinensis HOM05D005589 ORTHO05D006948 2.0e-39 166.8 246 44.7
FvH4_3g34630 Fragaria vesca HOM05D005589 ORTHO05D006948 2.7e-39 166.4 239 42.3
FAN11G1618 Fragaria x ananassa HOM05D005589 ORTHO05D006948 2.7e-39 166.4 239 42.3
Aqoxy2G01955 Aquilegia oxysepala HOM05D005589 ORTHO05D006948 3.5e-39 166.0 218 47.7
Medtr4g062090 Medicago truncatula HOM05D005589 ORTHO05D006948 3.5e-39 166.0 245 43.7
Dinv26284 Davidia involucrata HOM05D005589 ORTHO05D006948 4.6e-39 165.6 224 46.9
TPR.G2986 Trifolium pratense HOM05D005589 ORTHO05D006948 7.8e-39 164.9 245 43.7
RcHm_v2.0_Chr5g0062341 Rosa chinensis HOM05D005589 ORTHO05D006948 1.0e-38 164.5 239 42.7
Psat7g220760 Pisum sativum HOM05D005589 ORTHO05D006948 3.9e-38 162.5 244 43.4
Cfa011427 Carpinus fangiana HOM05D005589 ORTHO05D006948 5.0e-38 162.2 246 42.7
Ca_19212_v3 Cicer arietinum L. HOM05D005589 ORTHO05D006948 6.6e-38 161.8 245 42.9
VMungo1127G2244 Vigna mungo HOM05D005589 ORTHO05D006948 1.9e-37 160.2 244 43.0
GSVIVG01025056001 Vitis vinifera HOM05D005589 ORTHO05D006948 3.3e-37 159.5 223 44.4
MD11G1116800 Malus domestica HOM05D005589 ORTHO05D006948 3.6e-36 156.0 239 42.7
Atru.chr3.3796 Acer truncatum HOM05D005589 ORTHO05D006948 8.0e-36 154.8 244 41.8
Oeu040274.2 Olea europaea HOM05D005589 ORTHO05D006948 8.0e-36 154.8 193 46.6
CSS0045601 Camellia sinensis var. sinensis HOM05D005589 ORTHO05D006948 1.4e-35 154.1 216 44.9
Hma1.2p1_0846F.1_g227810 Hydrangea macrophylla HOM05D005589 ORTHO05D006948 1.4e-35 154.1 216 47.2
Hma1.2p1_0846F.1_g227820 Hydrangea macrophylla HOM05D005589 ORTHO05D006948 1.4e-35 154.1 216 47.2
COL.COLO4_18425 Corchorus olitorius HOM05D005589 ORTHO05D006948 2.3e-35 153.3 244 41.8
Lj3g0027543 Lotus japonicus HOM05D005589 ORTHO05D006948 2.3e-35 153.3 222 43.2
CSS0023618 Camellia sinensis var. sinensis HOM05D005589 ORTHO05D006948 4.0e-35 152.5 216 44.4
Actinidia07078 Actinidia chinensis HOM05D005589 ORTHO05D006948 5.2e-35 152.1 246 41.1
Haze_24005 Corylus avellana HOM05D005589 ORTHO05D006948 5.2e-35 152.1 264 39.8
SEGI_34947 Sequoiadendron giganteum HOM05D005589 ORTHO05D006948 5.2e-35 152.1 238 39.5
TWI31G1338 Tripterygium wilfordii HOM05D005589 ORTHO05D006948 5.2e-35 152.1 245 40.8
Phvul.011G069300 Phaseolus vulgaris HOM05D005589 ORTHO05D006948 6.8e-35 151.8 244 42.2
Sopen11g030610 Solanum pennellii HOM05D005589 ORTHO05D006948 1.2e-34 151.0 196 45.4
Ciclev10027829m.g Citrus clementina HOM05D005589 ORTHO05D006948 1.5e-34 150.6 221 41.2
Prupe.6G087200 Prunus persica HOM05D005589 ORTHO05D006948 2.0e-34 150.2 239 42.3
Eucgr.J02099 Eucalyptus grandis HOM05D005589 ORTHO05D006948 2.6e-34 149.8 222 43.7
Duzib168G1570 Durio zibethinus HOM05D005589 ORTHO05D006948 5.8e-34 148.7 220 43.6
Lj1A176T55 Lonicera japonica HOM05D005589 ORTHO05D006948 7.5e-34 148.3 223 43.9
Lalb_Chr19g0137591 Lupinus albus HOM05D005589 ORTHO05D006948 1.7e-33 147.1 222 41.4
Nitab4.5_0002684g0170 Nicotiana tabacum HOM05D005589 ORTHO05D006948 1.7e-33 147.1 200 44.0
Rhsim13G0088500 Rhododendron simsii HOM05D005589 ORTHO05D006948 1.7e-33 147.1 189 46.0
vmacro03127 Vaccinium macrocarpon HOM05D005589 ORTHO05D006948 1.7e-33 147.1 193 44.6
Solyc11g072950.3 Solanum lycopersicum HOM05D005589 ORTHO05D006948 2.9e-33 146.4 196 44.4
ClCG03G001750 Citrullus lanatus HOM05D005589 ORTHO05D006948 6.4e-33 145.2 191 43.5
MD03G1103200 Malus domestica HOM05D005589 ORTHO05D006948 8.3e-33 144.8 239 41.0
Thecc.09G329900 Theobroma cacao HOM05D005589 ORTHO05D006948 8.3e-33 144.8 220 43.2
SGA_v2.0_scaffold394G50722 Striga asiatica HOM05D005589 ORTHO05D006948 1.1e-32 144.4 191 42.9
Ah.08g215000 Amaranthus hybridus HOM05D005589 ORTHO05D006948 1.9e-32 143.7 211 39.3
Hund05020 Selenicereus undatus HOM05D005589 ORTHO05D006948 1.9e-32 143.7 214 40.2
Migut.D02148 Erythranthe guttata HOM05D005589 ORTHO05D006948 2.4e-32 143.3 213 42.7
Gohir.A05G098800 Gossypium hirsutum HOM05D005589 ORTHO05D006948 3.2e-32 142.9 220 42.7
Cc01_g12110 Coffea canephora HOM05D005589 ORTHO05D006948 4.1e-32 142.5 221 43.0
Gorai.009G102500 Gossypium raimondii HOM05D005589 ORTHO05D006948 5.4e-32 142.1 220 41.8
Os05g0117600 Oryza sativa ssp. japonica HOM05D005589 ORTHO05D006948 5.4e-32 142.1 188 43.6
EL10Ac7g15939 Beta vulgaris HOM05D005589 ORTHO05D006948 9.2e-32 141.4 236 38.1
Gohir.D05G098801 Gossypium hirsutum HOM05D005589 ORTHO05D006948 9.2e-32 141.4 220 41.8
DCAR_015589 Daucus carota HOM05D005589 ORTHO05D006948 2.1e-31 140.2 212 42.0
PSO339G3114 Papaver somniferum HOM05D005589 ORTHO05D006948 2.1e-31 140.2 127 56.7
Nitab4.5_0007030g0040 Nicotiana tabacum HOM05D005589 ORTHO05D006948 2.7e-31 139.8 204 44.1
Sc21g0005390 Simmondsia chinensis HOM05D005589 ORTHO05D006948 2.7e-31 139.8 185 44.3
AUR62001854 Chenopodium quinoa HOM05D005589 ORTHO05D006948 3.5e-31 139.4 234 35.9
Manes.04G029200 Manihot esculenta HOM05D005589 ORTHO05D006948 3.5e-31 139.4 216 42.1
Zm00001eb266020 Zea mays HOM05D005589 ORTHO05D006948 3.5e-31 139.4 184 42.9
CsaV3_1G033840 Cucumis sativus L. HOM05D005589 ORTHO05D006948 4.6e-31 139.0 192 41.7
Glyma.12G074800 Glycine max HOM05D005589 ORTHO05D006948 1.3e-30 137.5 221 39.4
PSO384G0870 Papaver somniferum HOM05D005589 ORTHO05D006948 2.3e-30 136.7 127 55.1
arahy.Tifrunner.gnm1.ann1.0DF5JX Arachis hypogaea HOM05D005589 ORTHO05D006948 3.9e-30 136.0 131 51.1
MELO3C020678.2 Cucumis melo HOM05D005589 ORTHO05D006948 3.9e-30 136.0 192 41.1
arahy.Tifrunner.gnm1.ann1.3ELA68 Arachis hypogaea HOM05D005589 ORTHO05D006948 6.6e-30 135.2 131 51.1
Sp5g15410 Schrenkiella parvula HOM05D005589 ORTHO05D006948 1.1e-29 134.4 197 40.1
CANSAT54G1803 Cannabis sativa HOM05D005589 ORTHO05D006948 1.9e-29 133.7 236 37.3
SalBow3G0177 Salvia bowleyana HOM05D005589 ORTHO05D006948 1.9e-29 133.7 210 42.4
CARHR154660 Cardamine hirsuta HOM05D005589 ORTHO05D006948 2.5e-29 133.3 237 37.1
Thhalv10002414m.g Eutrema salsugineum HOM05D005589 ORTHO05D006948 2.5e-29 133.3 241 37.3
MSTRG.21170 Avicennia marina HOM05D005589 ORTHO05D006948 9.5e-29 131.3 214 38.8
HPP92_025619 Vanilla planifolia HOM05D005589 ORTHO05D006948 9.5e-29 131.3 213 38.5
Sabra16G0140600 Salix brachista HOM05D005589 ORTHO05D006948 1.6e-28 130.6 189 41.3
THA.LOC104799457 Tarenaya hassleriana HOM05D005589 ORTHO05D006948 1.6e-28 130.6 188 42.0
Thhalv10002404m.g Eutrema salsugineum HOM05D005589 ORTHO05D006948 2.1e-28 130.2 241 36.5
Aa31LG4G15320 Aethionema arabicum HOM05D005589 ORTHO05D006948 3.6e-28 129.4 192 40.1
AL5G25010 Arabidopsis lyrata HOM05D005589 ORTHO05D006948 3.6e-28 129.4 241 36.1
Potri.001G234300 Populus trichocarpa HOM05D005589 ORTHO05D006948 1.1e-27 127.9 186 43.0
A06p20980 Brassica napus HOM05D005589 ORTHO05D006948 4.0e-27 125.9 235 37.0
Carub.0005s1206 Capsella rubella HOM05D005589 ORTHO05D006948 4.0e-27 125.9 241 36.9
C03p70540 Brassica napus HOM05D005589 ORTHO05D006948 5.2e-27 125.6 235 36.6
Cpa.g.sc252.12 Carica papaya HOM05D005589 ORTHO05D006948 3.4e-26 122.9 246 40.2
Sed0009383 Sechium edule HOM05D005589 ORTHO05D006948 3.4e-26 122.9 243 34.2
Glyma.11G145645 Glycine max HOM05D005589 ORTHO05D006948 4.4e-26 122.5 222 38.3
BcaC01g01924 Brassica carinata HOM05D005589 ORTHO05D006948 7.6e-26 121.7 234 37.6
AT3G46220 Arabidopsis thaliana HOM05D005589 ORTHO05D006948 9.9e-26 121.3 241 34.9
CAN.G755.19 Capsicum annuum HOM05D005589 ORTHO05D006948 9.9e-26 121.3 124 48.4
BolC3t19334H Brassica oleracea HOM05D005589 ORTHO05D006948 1.7e-25 120.6 237 36.3
AUR62009648 Chenopodium quinoa HOM05D005589 ORTHO05D006948 8.3e-25 118.2 245 33.1
unitig_37.g12679 Utricularia gibba HOM05D005589 ORTHO05D006948 1.9e-24 117.1 190 40.0
PGSC0003DMG400015549 Solanum tuberosum HOM05D005589 ORTHO05D006948 7.1e-24 115.2 118 48.3
BraA06t25186Z Brassica rapa HOM05D005589 ORTHO05D006948 9.2e-24 114.8 263 33.1
Lsat_1_v5_gn_9_21601 Lactuca sativa HOM05D005589 ORTHO05D006948 1.6e-23 114.0 164 43.3
PGR119G2409 Punica granatum HOM05D005589 ORTHO05D006948 1.3e-22 110.9 212 36.8
Peaxi162Scf00411g00711 Petunia axillaris HOM05D005589 ORTHO05D006948 5.1e-22 109.0 211 37.0
AL1G56480 Arabidopsis lyrata HOM05D005589 ORTHO05D006948 6.6e-22 108.6 98 52.0
HanXRQChr08g0228221 Helianthus annuus HOM05D005589 ORTHO05D006948 7.3e-21 105.1 208 35.6
ECA247G1976 Erigeron canadensis HOM05D005589 ORTHO05D006948 2.1e-20 103.6 130 41.5
Mapoly0007s0143 Marchantia polymorpha HOM05D005589 ORTHO05D006948 6.8e-19 98.6 183 33.3
AagrBONN_evm.TU.Sc2ySwM_228.2492 Anthoceros agrestis HOM05D005589 ORTHO05D006948 1.9e-16 90.5 197 35.5
CBR_g29437 Chara braunii HOM05D005589 ORTHO05D006948 1.0e-14 84.7 143 37.1
Pp3c8_20630 Physcomitrium patens HOM05D005589 ORTHO05D006948 8.7e-14 81.6 122 36.1
arahy.Tifrunner.gnm1.ann1.35TLEJ Arachis hypogaea HOM05D005589 ORTHO05D006948 1.1e-13 81.3 130 36.9
CBR_g777 Chara braunii HOM05D005589 ORTHO05D006948 1.1e-13 81.3 140 35.7
SMO196G0111 Selaginella moellendorffii HOM05D005589 ORTHO05D006948 5.6e-13 79.0 192 30.2
CSS0044614 Camellia sinensis var. sinensis HOM05D005589 ORTHO05D006948 7.1e-08 62.0 40 72.5
Actinidia37260 Actinidia chinensis HOM05D005589 ORTHO05D006948 4.6e-07 59.3 99 34.3


User provided reference genes

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