Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0757G208 Amborella trichopoda HOM05D007196 ORTHO05D009100 6.4e-35 150.2 77 100.0
Actinidia13526 Actinidia chinensis HOM05D007196 ORTHO05D009100 1.0e-11 73.2 75 57.3
TAR375G0687 Trochodendron aralioides HOM05D007196 ORTHO05D009100 1.0e-11 73.2 76 55.3
Rhsim03G0172900 Rhododendron simsii HOM05D007196 ORTHO05D009100 2.9e-11 71.6 75 56.0
Aqoxy7G00560 Aquilegia oxysepala HOM05D007196 ORTHO05D009100 5.0e-11 70.9 75 53.3
vmacro06759 Vaccinium macrocarpon HOM05D007196 ORTHO05D009100 1.4e-10 69.3 75 56.0
PSO478G0391 Papaver somniferum HOM05D007196 ORTHO05D009100 1.9e-10 68.9 75 58.7
PSO782G2298 Papaver somniferum HOM05D007196 ORTHO05D009100 1.9e-10 68.9 75 58.7
CSS0025032 Camellia sinensis var. sinensis HOM05D007196 ORTHO05D009100 4.2e-10 67.8 74 52.7
CDE11G1107 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 9.4e-10 66.6 76 47.4
MBI12_g21133_MAGBIO Magnolia biondii HOM05D007196 ORTHO05D009100 1.6e-09 65.9 78 51.3
Hma1.2p1_0488F.1_g163760 Hydrangea macrophylla HOM05D007196 ORTHO05D009100 2.1e-09 65.5 87 51.7
Duzib205G1842 Durio zibethinus HOM05D007196 ORTHO05D009100 3.6e-09 64.7 83 50.6
Haze_13814 Corylus avellana HOM05D007196 ORTHO05D009100 7.9e-09 63.5 87 50.6
Dinv08000 Davidia involucrata HOM05D007196 ORTHO05D009100 7.9e-09 63.5 85 51.8
CDE02G2935 Ceratophyllum demersum HOM05D007196 ORTHO05D009100 1.0e-08 63.2 77 45.5
Manes.14G032200 Manihot esculenta HOM05D007196 ORTHO05D009100 1.4e-08 62.8 74 51.4
Nn4g26452 Nelumbo nucifera HOM05D007196 ORTHO05D009100 1.4e-08 62.8 35 88.6
Cpa.g.sc3.256 Carica papaya HOM05D007196 ORTHO05D009100 1.8e-08 62.4 79 49.4
Dinv28524 Davidia involucrata HOM05D007196 ORTHO05D009100 1.8e-08 62.4 48 72.9
Duzib068G1365 Durio zibethinus HOM05D007196 ORTHO05D009100 1.8e-08 62.4 85 48.2
Duzib205G0862 Durio zibethinus HOM05D007196 ORTHO05D009100 1.8e-08 62.4 83 49.4
Migut.F00414 Erythranthe guttata HOM05D007196 ORTHO05D009100 1.8e-08 62.4 37 81.1
TWI14G0139 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 2.3e-08 62.0 78 50.0
QL12p039322 Quercus lobata HOM05D007196 ORTHO05D009100 3.0e-08 61.6 87 49.4
Cc02_g03760 Coffea canephora HOM05D007196 ORTHO05D009100 3.9e-08 61.2 73 49.3
Eucgr.K00137 Eucalyptus grandis HOM05D007196 ORTHO05D009100 3.9e-08 61.2 80 52.5
Potri.012G130600 Populus trichocarpa HOM05D007196 ORTHO05D009100 3.9e-08 61.2 41 80.5
Atru.chr1.612 Acer truncatum HOM05D007196 ORTHO05D009100 5.1e-08 60.8 78 52.6
CiPaw.03G098100 Carya illinoinensis HOM05D007196 ORTHO05D009100 5.1e-08 60.8 90 45.6
Sabra12G0098300 Salix brachista HOM05D007196 ORTHO05D009100 5.1e-08 60.8 44 70.5
SalBow4G2038 Salvia bowleyana HOM05D007196 ORTHO05D009100 5.1e-08 60.8 48 58.3
TWI23G0806 Tripterygium wilfordii HOM05D007196 ORTHO05D009100 5.1e-08 60.8 79 49.4
Nitab4.5_0003984g0020 Nicotiana tabacum HOM05D007196 ORTHO05D009100 6.7e-08 60.5 74 50.0
Cfa008239 Carpinus fangiana HOM05D007196 ORTHO05D009100 8.8e-08 60.1 86 47.7
Cc00_g08970 Coffea canephora HOM05D007196 ORTHO05D009100 1.1e-07 59.7 75 48.0
Gohir.A11G008400 Gossypium hirsutum HOM05D007196 ORTHO05D009100 1.1e-07 59.7 43 67.4
Thecc.03G163500 Theobroma cacao HOM05D007196 ORTHO05D009100 1.1e-07 59.7 85 51.8
Peaxi162Scf00192g00828 Petunia axillaris HOM05D007196 ORTHO05D009100 1.5e-07 59.3 74 50.0
Gohir.D11G007600 Gossypium hirsutum HOM05D007196 ORTHO05D009100 2.0e-07 58.9 42 76.2
Gorai.007G009100 Gossypium raimondii HOM05D007196 ORTHO05D009100 2.0e-07 58.9 42 76.2
Potri.015G132500 Populus trichocarpa HOM05D007196 ORTHO05D009100 2.6e-07 58.5 41 78.0
GSVIVG01018482001 Vitis vinifera HOM05D007196 ORTHO05D009100 3.3e-07 58.2 37 75.7
Prupe.2G283900 Prunus persica HOM05D007196 ORTHO05D009100 4.4e-07 57.8 51 62.7
Solyc03g007030.3 Solanum lycopersicum HOM05D007196 ORTHO05D009100 4.4e-07 57.8 74 48.6
Sopen03g003020 Solanum pennellii HOM05D007196 ORTHO05D009100 4.4e-07 57.8 74 48.6
COL.COLO4_14199 Corchorus olitorius HOM05D007196 ORTHO05D009100 5.7e-07 57.4 87 47.1
PGSC0003DMG400031014 Solanum tuberosum HOM05D007196 ORTHO05D009100 5.7e-07 57.4 74 47.3
Sed0001882 Sechium edule HOM05D007196 ORTHO05D009100 7.4e-07 57.0 37 78.4
CAN.G1481.5 Capsicum annuum HOM05D007196 ORTHO05D009100 9.7e-07 56.6 35 77.1
AUR62016084 Chenopodium quinoa HOM05D007196 ORTHO05D009100 9.7e-07 56.6 50 64.0
EL10Ac3g05770 Beta vulgaris HOM05D007196 ORTHO05D009100 1.3e-06 56.2 58 55.2
RcHm_v2.0_Chr1g0375291 Rosa chinensis HOM05D007196 ORTHO05D009100 1.3e-06 56.2 41 65.9
Glyma.16G203100 Glycine max HOM05D007196 ORTHO05D009100 1.7e-06 55.8 81 46.9
Psat1g109280 Pisum sativum HOM05D007196 ORTHO05D009100 1.7e-06 55.8 85 38.8
unitig_52.g17755 Utricularia gibba HOM05D007196 ORTHO05D009100 1.7e-06 55.8 74 45.9
AUR62021293 Chenopodium quinoa HOM05D007196 ORTHO05D009100 2.2e-06 55.5 50 62.0
HanXRQChr07g0206311 Helianthus annuus HOM05D007196 ORTHO05D009100 2.2e-06 55.5 44 65.9
Phvul.004G125800 Phaseolus vulgaris HOM05D007196 ORTHO05D009100 2.8e-06 55.1 79 44.3
arahy.Tifrunner.gnm1.ann1.S0TT2Y Arachis hypogaea HOM05D007196 ORTHO05D009100 3.7e-06 54.7 55 58.2
CANSAT21G1841 Cannabis sativa HOM05D007196 ORTHO05D009100 3.7e-06 54.7 33 78.8
MD01G1187500 Malus domestica HOM05D007196 ORTHO05D009100 3.7e-06 54.7 45 60.0
FAN03G0205 Fragaria x ananassa HOM05D007196 ORTHO05D009100 4.8e-06 54.3 41 63.4
FAN03G1444 Fragaria x ananassa HOM05D000077 ORTHO05D000981 4.8e-06 54.3 41 63.4
FAN10G3863 Fragaria x ananassa HOM05D007196 ORTHO05D009100 4.8e-06 54.3 41 63.4
FAN06G1802 Fragaria x ananassa HOM05D007196 ORTHO05D009100 6.3e-06 53.9 37 75.7
FAN06G4298 Fragaria x ananassa HOM05D007196 ORTHO05D009100 6.3e-06 53.9 37 75.7
DCAR_018131 Daucus carota HOM05D007196 ORTHO05D009100 8.2e-06 53.5 37 67.6
Glyma.09G152100 Glycine max HOM05D007196 ORTHO05D009100 8.2e-06 53.5 39 71.8
Lj2g0025497 Lotus japonicus HOM05D007196 ORTHO05D009100 8.2e-06 53.5 41 68.3


User provided reference genes

Program Settings