Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0757G200 Amborella trichopoda HOM05D006418 ORTHO05D008063 1.3e-199 699.5 342 100.0
TAR375G0873 Trochodendron aralioides HOM05D006418 ORTHO05D008063 1.3e-151 540.0 316 80.7
Duzib138G1515 Durio zibethinus HOM05D006418 ORTHO05D008063 1.2e-149 533.5 322 78.9
Nn1g01350 Nelumbo nucifera HOM05D006418 ORTHO05D008063 3.5e-149 531.9 317 78.5
MD07G1128500 Malus domestica HOM05D006418 ORTHO05D008063 6.6e-148 527.7 328 75.6
Aqoxy5G03975 Aquilegia oxysepala HOM05D006418 ORTHO05D008063 3.3e-147 525.4 305 78.7
FvH4_7g13130 Fragaria vesca HOM05D006418 ORTHO05D008063 3.3e-147 525.4 324 77.5
FAN06G0540 Fragaria x ananassa HOM05D006418 ORTHO05D008063 3.3e-147 525.4 324 77.5
FAN06G3976 Fragaria x ananassa HOM05D006418 ORTHO05D008063 3.3e-147 525.4 324 77.5
CiPaw.01G053600 Carya illinoinensis HOM05D006418 ORTHO05D008063 9.5e-147 523.9 316 79.4
FAN10G2923 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.6e-146 523.1 333 75.4
FAN01G2003 Fragaria x ananassa HOM05D006418 ORTHO05D008063 3.6e-146 521.9 333 74.5
Rhsim07G0021100 Rhododendron simsii HOM05D006418 ORTHO05D008063 3.6e-146 521.9 332 74.4
GSVIVG01027527001 Vitis vinifera HOM05D006418 ORTHO05D008063 4.7e-146 521.5 312 76.6
Gorai.007G095100 Gossypium raimondii HOM05D006418 ORTHO05D008063 6.2e-146 521.2 321 76.6
Ciclev10021113m.g Citrus clementina HOM05D006418 ORTHO05D008063 1.4e-145 520.0 324 75.6
FAN03G2411 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.4e-145 520.0 333 74.8
CANSAT56G2190 Cannabis sativa HOM05D006418 ORTHO05D008063 2.3e-145 519.2 301 79.1
COL.COLO4_12625 Corchorus olitorius HOM05D006418 ORTHO05D008063 4.0e-145 518.5 328 74.7
Gohir.D11G089100 Gossypium hirsutum HOM05D006418 ORTHO05D008063 5.2e-145 518.1 321 76.3
vmacro13338 Vaccinium macrocarpon HOM05D006418 ORTHO05D008063 5.2e-145 518.1 296 80.1
Lj7A519G38 Lonicera japonica HOM05D006418 ORTHO05D008063 8.9e-145 517.3 304 79.3
Dinv32422 Davidia involucrata HOM05D006418 ORTHO05D008063 4.4e-144 515.0 294 81.3
Potri.002G153100 Populus trichocarpa HOM05D006418 ORTHO05D008063 4.4e-144 515.0 323 74.6
Actinidia38288 Actinidia chinensis HOM05D006418 ORTHO05D008063 3.7e-143 511.9 306 78.4
CSS0035566 Camellia sinensis var. sinensis HOM05D006418 ORTHO05D008063 3.7e-143 511.9 294 79.6
RcHm_v2.0_Chr1g0352261 Rosa chinensis HOM05D006418 ORTHO05D008063 3.7e-143 511.9 301 79.1
Eucgr.E00217 Eucalyptus grandis HOM05D006418 ORTHO05D008063 6.4e-143 511.1 302 77.5
arahy.Tifrunner.gnm1.ann1.K1NG1D Arachis hypogaea HOM05D006418 ORTHO05D008063 8.3e-143 510.8 333 74.5
HanXRQChr06g0169031 Helianthus annuus HOM05D006418 ORTHO05D008063 1.9e-142 509.6 328 73.5
TWI59G1449 Tripterygium wilfordii HOM05D006418 ORTHO05D008063 1.9e-142 509.6 327 72.8
Sopen01g037560 Solanum pennellii HOM05D006418 ORTHO05D008063 3.2e-142 508.8 323 74.6
THA.LOC104827683 Tarenaya hassleriana HOM05D006418 ORTHO05D008063 3.2e-142 508.8 300 77.0
Cc02_g37230 Coffea canephora HOM05D006418 ORTHO05D008063 4.1e-142 508.4 335 72.2
ECA236G1148 Erigeron canadensis HOM05D006418 ORTHO05D008063 4.1e-142 508.4 299 78.6
Lj3g0006580 Lotus japonicus HOM05D006418 ORTHO05D008063 4.1e-142 508.4 319 74.6
Nitab4.5_0010430g0060 Nicotiana tabacum HOM05D006418 ORTHO05D008063 4.1e-142 508.4 322 74.2
Sabra02G0121400 Salix brachista HOM05D006418 ORTHO05D008063 4.1e-142 508.4 324 73.1
Glyma.03G017600 Glycine max HOM05D006418 ORTHO05D008063 5.4e-142 508.1 319 75.5
Cfa004182 Carpinus fangiana HOM05D006418 ORTHO05D008063 7.1e-142 507.7 294 79.6
ClCG05G001910 Citrullus lanatus HOM05D006418 ORTHO05D008063 7.1e-142 507.7 325 73.8
PGSC0003DMG400017054 Solanum tuberosum HOM05D006418 ORTHO05D008063 9.2e-142 507.3 323 74.3
Solyc01g091780.4 Solanum lycopersicum HOM05D006418 ORTHO05D008063 1.6e-141 506.5 323 74.3
CiPaw.01G023800 Carya illinoinensis HOM05D006418 ORTHO05D008063 4.6e-141 505.0 318 76.7
Peaxi162Scf00021g00525 Petunia axillaris HOM05D006418 ORTHO05D008063 6.0e-141 504.6 294 78.2
Hund27325 Selenicereus undatus HOM05D006418 ORTHO05D008063 6.0e-141 504.6 338 71.3
Hma1.2p1_0033F.1_g020630 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 7.8e-141 504.2 297 77.4
PSO063G7157 Papaver somniferum HOM05D006418 ORTHO05D008063 7.8e-141 504.2 338 71.6
TPR.G17586 Trifolium pratense HOM05D006418 ORTHO05D008063 7.8e-141 504.2 325 74.5
VMungo0331G0376 Vigna mungo HOM05D006418 ORTHO05D008063 7.8e-141 504.2 323 74.0
EL10Ac1g00963 Beta vulgaris HOM05D006418 ORTHO05D008063 5.1e-140 501.5 342 71.3
PGR042G1311 Punica granatum HOM05D006418 ORTHO05D008063 1.1e-139 500.4 317 73.8
CAN.G170.50 Capsicum annuum HOM05D006418 ORTHO05D008063 1.5e-139 500.0 315 73.3
Lalb_Chr10g0097531 Lupinus albus HOM05D006418 ORTHO05D008063 2.5e-139 499.2 318 73.6
Phvul.010G092700 Phaseolus vulgaris HOM05D006418 ORTHO05D008063 1.6e-138 496.5 323 73.1
DCAR_025170 Daucus carota HOM05D006418 ORTHO05D008063 4.7e-138 495.0 303 75.9
Thhalv10006098m.g Eutrema salsugineum HOM05D006418 ORTHO05D008063 4.7e-138 495.0 300 76.0
Medtr8g032700 Medicago truncatula HOM05D006418 ORTHO05D008063 1.4e-137 493.4 298 76.8
Migut.B01688 Erythranthe guttata HOM05D006418 ORTHO05D008063 1.8e-137 493.0 322 73.9
Aa31LG10G15180 Aethionema arabicum HOM05D006418 ORTHO05D008063 3.1e-137 492.3 313 73.8
CARHR171390 Cardamine hirsuta HOM05D006418 ORTHO05D008063 4.0e-137 491.9 298 76.2
HPP92_014577 Vanilla planifolia HOM05D006418 ORTHO05D008063 5.2e-137 491.5 291 78.0
AL5G43290 Arabidopsis lyrata HOM05D006418 ORTHO05D008063 8.9e-137 490.7 298 74.8
Ca_23755_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 1.2e-136 490.3 298 76.2
Carub.0005s2773 Capsella rubella HOM05D006418 ORTHO05D008063 2.0e-136 489.6 300 75.0
Os03g0117800 Oryza sativa ssp. japonica HOM05D006418 ORTHO05D008063 2.6e-136 489.2 336 70.2
Sp5g02280 Schrenkiella parvula HOM05D006418 ORTHO05D008063 9.9e-136 487.3 313 72.5
AT3G61080 Arabidopsis thaliana HOM05D006418 ORTHO05D008063 2.2e-135 486.1 333 70.0
Nitab4.5_0004550g0130 Nicotiana tabacum HOM05D006418 ORTHO05D008063 3.8e-135 485.3 333 70.0
BcaB02g07390 Brassica carinata HOM05D006418 ORTHO05D008063 1.1e-134 483.8 300 75.3
Zm00001eb001200 Zea mays HOM05D006418 ORTHO05D008063 3.9e-132 475.3 292 75.3
MELO3C006151.2 Cucumis melo HOM05D006418 ORTHO05D008063 8.6e-132 474.2 364 65.1
BcaC08g45098 Brassica carinata HOM05D006418 ORTHO05D008063 1.1e-131 473.8 298 73.8
BraA07t30173Z Brassica rapa HOM05D006418 ORTHO05D008063 7.3e-131 471.1 305 73.1
SalBow3G2367 Salvia bowleyana HOM05D006418 ORTHO05D008063 1.6e-130 469.9 309 71.5
A07p25300 Brassica napus HOM05D006418 ORTHO05D008063 2.1e-130 469.5 305 73.1
C06p27060 Brassica napus HOM05D006418 ORTHO05D008063 1.4e-129 466.8 305 72.1
BolC6t37878H Brassica oleracea HOM05D006418 ORTHO05D008063 1.4e-129 466.8 305 72.1
CDE01G0065 Ceratophyllum demersum HOM05D006418 ORTHO05D008063 3.9e-124 448.7 285 74.7
Thecc.01G368600 Theobroma cacao HOM05D006418 ORTHO05D008063 2.5e-123 446.0 272 77.2
Mapoly0138s0005 Marchantia polymorpha HOM05D006418 ORTHO05D008063 4.5e-120 435.3 289 69.2
Manes.01G262400 Manihot esculenta HOM05D006418 ORTHO05D008063 1.7e-119 433.3 285 73.3
Prupe.2G154600 Prunus persica HOM05D006418 ORTHO05D008063 3.8e-119 432.2 241 82.2
Atru.chr5.403 Acer truncatum HOM05D006418 ORTHO05D008063 1.1e-118 430.6 279 73.5
Pp3c15_5030 Physcomitrium patens HOM05D006418 ORTHO05D008063 3.2e-118 429.1 336 60.7
AagrBONN_evm.TU.Sc2ySwM_344.2134 Anthoceros agrestis HOM05D006418 ORTHO05D008063 6.0e-117 424.9 291 66.3
CBR_g38943 Chara braunii HOM05D006418 ORTHO05D008063 1.8e-116 423.3 293 65.9
CsaV3_3G009310 Cucumis sativus L. HOM05D006418 ORTHO05D008063 7.4e-115 417.9 241 79.3
SGA_v2.0_scaffold95G28870 Striga asiatica HOM05D006418 ORTHO05D008063 9.6e-115 417.5 341 63.6
Psat4g151800 Pisum sativum HOM05D006418 ORTHO05D008063 6.2e-114 414.8 256 73.4
AUR62004291 Chenopodium quinoa HOM05D006418 ORTHO05D008063 5.3e-113 411.8 251 74.1
Sed0024588 Sechium edule HOM05D006418 ORTHO05D008063 4.5e-112 408.7 241 77.6
Lsat_1_v5_gn_7_8501 Lactuca sativa HOM05D006418 ORTHO05D008063 1.7e-111 406.8 261 71.6
SMO356G0133 Selaginella moellendorffii HOM05D006418 ORTHO05D008063 4.2e-110 402.1 287 63.8
Oeu024416.1 Olea europaea HOM05D006418 ORTHO05D008063 1.9e-107 393.3 287 68.3
QL08p050652 Quercus lobata HOM05D006418 ORTHO05D008063 9.6e-107 391.0 251 75.7
Cpa.g.sc18.197 Carica papaya HOM05D006418 ORTHO05D008063 5.7e-99 365.2 221 76.5
unitig_22.g5367 Utricularia gibba HOM05D006418 ORTHO05D008063 1.1e-94 350.9 204 78.4
Cc02_g37660 Coffea canephora HOM05D006418 ORTHO05D008063 1.8e-92 343.6 208 76.0
MBI12_g25033_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 1.5e-91 340.5 233 68.2
Gohir.A11G085000 Gossypium hirsutum HOM05D006418 ORTHO05D008063 9.1e-89 331.3 182 81.3
Hma1.2p1_0033F.1_g020640 Hydrangea macrophylla HOM05D006418 ORTHO05D008063 5.3e-81 305.4 254 59.8
SEGI_14549 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 5.3e-73 278.9 170 74.1
Cre12.g542202 Chlamydomonas reinhardtii HOM05D006418 ORTHO05D008063 8.5e-71 271.6 295 46.8
MCO14G366 Micromonas commoda HOM05D006418 ORTHO05D008063 4.4e-67 259.2 318 45.9
Sc26g0001060 Simmondsia chinensis HOM05D001335 ORTHO05D001184 4.2e-62 242.7 178 66.9
arahy.Tifrunner.gnm1.ann1.N7AMXP Arachis hypogaea HOM05D006418 ORTHO05D008063 2.7e-56 223.4 130 81.5
Haze_15226 Corylus avellana HOM05D006418 ORTHO05D008063 1.0e-55 221.5 137 75.2
FAN10G0301 Fragaria x ananassa HOM05D006418 ORTHO05D008063 1.3e-55 221.1 202 57.9
PRCOL_00000121 Prasinoderma coloniale HOM05D006418 ORTHO05D008063 2.3e-55 220.3 285 42.5
Pp3c1_6480 Physcomitrium patens HOM05D006418 ORTHO05D008063 1.7e-42 177.6 278 36.0
Sc26g0001070 Simmondsia chinensis HOM05D006418 ORTHO05D008063 4.1e-41 172.9 137 64.2
Sabra14G0055300 Salix brachista HOM05D006418 ORTHO05D008063 2.0e-40 170.6 269 39.0
Glyma.07G078900 Glycine max HOM05D006418 ORTHO05D008063 1.3e-39 167.9 175 55.4
ATR0620G127 Amborella trichopoda HOM05D006418 ORTHO05D008063 4.3e-38 162.9 157 55.4
Gohir.A11G084900 Gossypium hirsutum HOM05D006418 ORTHO05D008063 4.3e-38 162.9 115 68.7
Ca_28970_v3 Cicer arietinum L. HOM05D006418 ORTHO05D008063 1.4e-33 147.9 279 34.1
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 4.0e-28 129.8 298 32.2
unitig_22.g5366 Utricularia gibba HOM05D003447 ORTHO05D003967 2.0e-19 100.9 92 59.8
CiPaw.01G052800 Carya illinoinensis HOM05D006418 ORTHO05D008063 9.2e-17 92.0 70 67.1
Cc00_g22860 Coffea canephora HOM05D006418 ORTHO05D008063 5.6e-14 82.8 57 66.7
SEGI_36912 Sequoiadendron giganteum HOM05D006418 ORTHO05D008063 1.5e-11 74.7 54 66.7
MBI16_g15528_MAGBIO Magnolia biondii HOM05D006418 ORTHO05D008063 3.4e-11 73.6 42 81.0
Actinidia27830 Actinidia chinensis HOM05D006418 ORTHO05D008063 5.4e-09 66.2 41 70.7
MBI11_g05318_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.5e-06 58.2 30 90.0


User provided reference genes

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