Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0757G161 Amborella trichopoda HOM05D000026 ORTHO05D008596 1.5e-39 165.6 79 100.0
Thecc.01G339500 Theobroma cacao HOM05D000026 ORTHO05D008596 8.4e-30 133.3 77 75.3
Duzib133G0719 Durio zibethinus HOM05D000026 ORTHO05D008596 2.4e-29 131.7 77 76.6
Actinidia28110 Actinidia chinensis HOM05D000026 ORTHO05D008596 9.2e-29 129.8 77 75.3
CANSAT56G3067 Cannabis sativa HOM05D000026 ORTHO05D008596 3.5e-28 127.9 77 74.0
FAN06G2200 Fragaria x ananassa HOM05D000026 ORTHO05D008596 3.5e-28 127.9 77 72.7
Gohir.A07G136500 Gossypium hirsutum HOM05D000026 ORTHO05D008596 4.6e-28 127.5 77 71.4
Gohir.D07G141900 Gossypium hirsutum HOM05D000026 ORTHO05D008596 4.6e-28 127.5 77 71.4
Gorai.001G153500 Gossypium raimondii HOM05D000026 ORTHO05D008596 4.6e-28 127.5 77 71.4
HanXRQChr16g0524761 Helianthus annuus HOM05D000026 ORTHO05D008596 7.8e-28 126.7 77 72.7
MBI04_g28825_MAGBIO Magnolia biondii HOM05D000026 ORTHO05D008596 7.8e-28 126.7 75 78.7
Solyc05g050530.3 Solanum lycopersicum HOM05D000026 ORTHO05D008596 1.0e-27 126.3 77 72.7
Cfa003780 Carpinus fangiana HOM05D000026 ORTHO05D008596 1.3e-27 125.9 77 74.0
QL08p045855 Quercus lobata HOM05D000026 ORTHO05D008596 1.3e-27 125.9 78 70.5
CSS0047897 Camellia sinensis var. sinensis HOM05D000026 ORTHO05D008596 3.9e-27 124.4 77 70.1
Nitab4.5_0000258g0260 Nicotiana tabacum HOM05D000026 ORTHO05D008596 3.9e-27 124.4 75 72.0
Sopen05g028950 Solanum pennellii HOM05D000026 ORTHO05D008596 3.9e-27 124.4 75 73.3
Cc02_g39620 Coffea canephora HOM05D000026 ORTHO05D008596 5.1e-27 124.0 75 73.3
DCAR_006978 Daucus carota HOM05D000026 ORTHO05D008596 5.1e-27 124.0 78 70.5
RcHm_v2.0_Chr1g0360221 Rosa chinensis HOM05D000026 ORTHO05D008596 6.6e-27 123.6 79 72.2
ECA234G0680 Erigeron canadensis HOM05D000026 ORTHO05D008596 8.7e-27 123.2 77 68.8
PGSC0003DMG400007008 Solanum tuberosum HOM05D000026 ORTHO05D008596 8.7e-27 123.2 73 74.0
TWI23G0686 Tripterygium wilfordii HOM05D000026 ORTHO05D008596 8.7e-27 123.2 77 71.4
FvH4_7g16970 Fragaria vesca HOM05D000026 ORTHO05D008596 1.1e-26 122.9 79 70.9
FAN06G4713 Fragaria x ananassa HOM05D000026 ORTHO05D008596 1.1e-26 122.9 79 70.9
COL.COLO4_06235 Corchorus olitorius HOM05D000026 ORTHO05D008596 1.5e-26 122.5 77 70.1
FAN10G3002 Fragaria x ananassa HOM05D000026 ORTHO05D008596 1.5e-26 122.5 79 70.9
TAR629G1880 Trochodendron aralioides HOM05D000026 ORTHO05D008596 1.9e-26 122.1 77 72.7
CAN.G360.5 Capsicum annuum HOM05D000026 ORTHO05D008596 4.3e-26 120.9 75 69.3
Prupe.2G192000 Prunus persica HOM05D000026 ORTHO05D008596 4.3e-26 120.9 79 69.6
FAN01G2684 Fragaria x ananassa HOM05D000026 ORTHO05D008596 9.6e-26 119.8 79 69.6
Lsat_1_v5_gn_4_30860 Lactuca sativa HOM05D000026 ORTHO05D008596 9.6e-26 119.8 77 67.5
Atru.chr5.703 Acer truncatum HOM05D000026 ORTHO05D008596 1.6e-25 119.0 77 66.2
EL10Ac1g00239 Beta vulgaris HOM05D000026 ORTHO05D008596 2.1e-25 118.6 71 73.2
TWI59G0194 Tripterygium wilfordii HOM05D000026 ORTHO05D008596 2.1e-25 118.6 77 68.8
PGR031G0964 Punica granatum HOM05D000026 ORTHO05D008596 3.6e-25 117.9 73 69.9
AL4G46010 Arabidopsis lyrata HOM05D000026 ORTHO05D008596 4.7e-25 117.5 77 67.5
Manes.05G020900 Manihot esculenta HOM05D000026 ORTHO05D008596 4.7e-25 117.5 73 72.6
Eucgr.D02387 Eucalyptus grandis HOM05D000026 ORTHO05D008596 6.2e-25 117.1 79 73.4
Lj7A496T103 Lonicera japonica HOM05D000026 ORTHO05D008596 6.2e-25 117.1 70 74.3
MD01G1084300 Malus domestica HOM05D000026 ORTHO05D008596 1.4e-24 115.9 79 67.1
AT2G46580 Arabidopsis thaliana HOM05D000026 ORTHO05D008596 2.4e-24 115.2 77 66.2
CDE02G1978 Ceratophyllum demersum HOM05D000026 ORTHO05D008596 2.4e-24 115.2 73 72.6
Sp4g28630 Schrenkiella parvula HOM05D000026 ORTHO05D008596 3.1e-24 114.8 77 64.9
Hund27184 Selenicereus undatus HOM05D000026 ORTHO05D008596 3.1e-24 114.8 70 71.4
Carub.0004s2930 Capsella rubella HOM05D000026 ORTHO05D008596 4.0e-24 114.4 77 64.9
CsaV3_3G007930 Cucumis sativus L. HOM05D000026 ORTHO05D008596 4.0e-24 114.4 77 64.9
unitig_21.g20560 Utricularia gibba HOM05D000026 ORTHO05D008596 4.0e-24 114.4 71 69.0
CARHR141930 Cardamine hirsuta HOM05D000026 ORTHO05D008596 5.2e-24 114.0 77 64.9
SEGI_21315 Sequoiadendron giganteum HOM05D000026 ORTHO05D008596 5.2e-24 114.0 77 62.3
vmacro12664 Vaccinium macrocarpon HOM05D000026 ORTHO05D008596 5.2e-24 114.0 74 71.6
Ciclev10022329m.g Citrus clementina HOM05D000026 ORTHO05D008596 6.9e-24 113.6 74 67.6
GSVIVG01027181001 Vitis vinifera HOM05D000026 ORTHO05D008596 6.9e-24 113.6 77 70.1
Os03g0115500 Oryza sativa ssp. japonica HOM05D000026 ORTHO05D008596 9.0e-24 113.2 75 70.7
Thhalv10001639m.g Eutrema salsugineum HOM05D000026 ORTHO05D008596 1.2e-23 112.8 77 63.6
Pp3c7_90 Physcomitrium patens HOM05D000026 ORTHO05D008596 1.2e-23 112.8 71 67.6
Potri.014G100700 Populus trichocarpa HOM05D000026 ORTHO05D008596 1.2e-23 112.8 77 64.9
BcaC02g07019 Brassica carinata HOM05D000026 ORTHO05D008596 2.6e-23 111.7 77 62.3
C04p72250 Brassica napus HOM05D000026 ORTHO05D008596 2.6e-23 111.7 77 62.3
Cpa.g.sc96.56 Carica papaya HOM05D000026 ORTHO05D008596 2.6e-23 111.7 77 62.3
arahy.Tifrunner.gnm1.ann1.HRQ3AE Arachis hypogaea HOM05D000026 ORTHO05D008596 3.4e-23 111.3 73 68.5
Lj3g0003520 Lotus japonicus HOM05D000026 ORTHO05D008596 3.4e-23 111.3 73 71.2
SGA_v2.0_scaffold232G43545 Striga asiatica HOM05D000026 ORTHO05D008596 3.4e-23 111.3 78 65.4
A04p34480 Brassica napus HOM05D000026 ORTHO05D008596 4.4e-23 110.9 77 62.3
BraA04t18906Z Brassica rapa HOM05D000026 ORTHO05D008596 4.4e-23 110.9 77 62.3
Sc01g0002470 Simmondsia chinensis HOM05D000026 ORTHO05D008596 4.4e-23 110.9 73 65.8
BcaC02g07042 Brassica carinata HOM05D000026 ORTHO05D008596 5.8e-23 110.5 78 65.4
Migut.N01531 Erythranthe guttata HOM05D000026 ORTHO05D008596 5.8e-23 110.5 73 67.1
Hma1.2p1_0101F.1_g049143 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 7.6e-23 110.2 70 70.0
Hma1.2p1_2584F.1_g324880 Hydrangea macrophylla HOM05D000026 ORTHO05D008596 7.6e-23 110.2 70 70.0
Phvul.010G115400 Phaseolus vulgaris HOM05D000026 ORTHO05D008596 7.6e-23 110.2 73 69.9
MSTRG.28272 Avicennia marina HOM05D000026 ORTHO05D008596 9.9e-23 109.8 78 64.1
Zm00001eb001050 Zea mays HOM05D000026 ORTHO05D008596 9.9e-23 109.8 75 68.0
MELO3C006011.2 Cucumis melo HOM05D000026 ORTHO05D008596 1.3e-22 109.4 77 63.6
Potri.002G173800 Populus trichocarpa HOM05D000026 ORTHO05D008596 1.3e-22 109.4 71 64.8
THA.LOC104827623 Tarenaya hassleriana HOM05D000026 ORTHO05D008596 1.3e-22 109.4 77 62.3
Aqoxy5G04296 Aquilegia oxysepala HOM05D000026 ORTHO05D008596 2.2e-22 108.6 72 70.8
VMungo0331G1134 Vigna mungo HOM05D000026 ORTHO05D008596 2.9e-22 108.2 73 69.9
Ca_23515_v3 Cicer arietinum L. HOM05D000026 ORTHO05D008596 3.8e-22 107.8 77 64.9
TPR.G20231 Trifolium pratense HOM05D000026 ORTHO05D008596 4.9e-22 107.5 77 62.3
arahy.Tifrunner.gnm1.ann1.CN1679 Arachis hypogaea HOM05D000026 ORTHO05D008596 6.4e-22 107.1 73 67.1
Mapoly0085s0082 Marchantia polymorpha HOM05D000026 ORTHO05D008596 6.4e-22 107.1 71 67.6
PSO063G7217 Papaver somniferum HOM05D000026 ORTHO05D008596 2.4e-21 105.1 71 67.6
Glyma.16G023100 Glycine max HOM05D000026 ORTHO05D008596 7.1e-21 103.6 77 66.2
Lalb_Chr10g0100681 Lupinus albus HOM05D000026 ORTHO05D008596 9.3e-21 103.2 73 64.4
Sed0016971 Sechium edule HOM05D000026 ORTHO05D008596 9.3e-21 103.2 73 60.3
Medtr8g027365 Medicago truncatula HOM05D000026 ORTHO05D008596 1.6e-20 102.4 73 64.4
AagrBONN_evm.TU.Sc2ySwM_362.516 Anthoceros agrestis HOM05D005157 ORTHO05D006652 3.5e-20 101.3 71 62.0
Nn1g00327 Nelumbo nucifera HOM05D000026 ORTHO05D008596 7.8e-20 100.1 59 79.7
SMO119G0236 Selaginella moellendorffii HOM05D000026 ORTHO05D008596 7.8e-20 100.1 77 57.1
CBR_g3312 Chara braunii HOM05D000026 ORTHO05D008596 2.8e-17 91.7 71 56.3
Actinidia28403 Actinidia chinensis HOM05D000026 ORTHO05D008596 8.1e-17 90.1 49 79.6
AUR62004514 Chenopodium quinoa HOM05D000026 ORTHO05D008596 2.2e-14 82.0 47 76.6
FAN10G2309 Fragaria x ananassa HOM05D000026 ORTHO05D000127 2.9e-14 81.6 47 74.5
BcaNung06661 Brassica carinata HOM05D000026 ORTHO05D008596 3.8e-14 81.3 80 53.8
Nitab4.5_0003865g0100 Nicotiana tabacum HOM05D000026 ORTHO05D008596 9.3e-13 76.6 75 49.3
CiPaw.01G078200 Carya illinoinensis HOM05D000026 ORTHO05D008596 1.6e-12 75.9 47 66.0
Aa31LG1G27980 Aethionema arabicum HOM05D000026 ORTHO05D008596 2.1e-12 75.5 47 70.2
Haze_15680 Corylus avellana HOM05D000026 ORTHO05D008596 4.6e-12 74.3 47 72.3
MCO05G651 Micromonas commoda HOM05D000026 ORTHO05D008596 1.3e-09 66.2 57 50.9
BolC4t28712H Brassica oleracea HOM05D000026 ORTHO05D008596 3.7e-09 64.7 99 36.4
Dinv32607 Davidia involucrata HOM05D000026 ORTHO05D008596 4.8e-09 64.3 34 79.4
PSO170G4931 Papaver somniferum HOM05D000026 ORTHO05D008596 4.8e-09 64.3 61 55.7
FAN03G0355 Fragaria x ananassa HOM05D000026 ORTHO05D008596 4.0e-08 61.2 37 75.7


User provided reference genes

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