Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0757G135 Amborella trichopoda HOM05D007174 ORTHO05D009061 4.4e-135 484.6 237 100.0
Dinv35170 Davidia involucrata HOM05D007174 ORTHO05D009061 1.9e-69 266.5 215 61.4
Eucgr.K00215 Eucalyptus grandis HOM05D007174 ORTHO05D009061 5.5e-69 265.0 245 56.7
MBI04_g40843_MAGBIO Magnolia biondii HOM05D007174 ORTHO05D009061 1.2e-68 263.8 232 59.1
Nn1g01328 Nelumbo nucifera HOM05D007174 ORTHO05D009061 6.1e-68 261.5 214 60.3
CSS0029278 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 4.0e-67 258.8 203 63.5
CSS0030546 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 2.0e-66 256.5 196 63.3
Glyma.16G199500 Glycine max HOM05D007174 ORTHO05D009061 2.6e-66 256.1 243 56.0
Rhsim09G0195900 Rhododendron simsii HOM05D007174 ORTHO05D009061 2.6e-66 256.1 202 62.4
Thecc.03G169500 Theobroma cacao HOM05D007174 ORTHO05D009061 3.4e-66 255.8 210 59.5
Prupe.2G289100 Prunus persica HOM05D007174 ORTHO05D009061 5.7e-66 255.0 223 58.7
TAR374G0585 Trochodendron aralioides HOM05D007174 ORTHO05D009061 7.5e-66 254.6 203 62.1
CSS0008795 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 1.3e-65 253.8 203 62.6
Psat1g105240 Pisum sativum HOM05D007174 ORTHO05D009061 1.3e-65 253.8 228 55.7
ClCG05G007760 Citrullus lanatus HOM05D002642 ORTHO05D002834 2.2e-65 253.1 238 57.1
Cpa.g.sc3.335 Carica papaya HOM05D007174 ORTHO05D009061 2.8e-65 252.7 200 61.0
MD01G1195800 Malus domestica HOM05D007174 ORTHO05D009061 2.8e-65 252.7 223 57.0
Medtr6g465290 Medicago truncatula HOM05D007174 ORTHO05D009061 2.8e-65 252.7 223 57.8
arahy.Tifrunner.gnm1.ann1.CGP099 Arachis hypogaea HOM05D007174 ORTHO05D009061 6.3e-65 251.5 227 55.9
QL09p015458 Quercus lobata HOM05D007174 ORTHO05D009061 6.3e-65 251.5 229 56.8
vmacro09863 Vaccinium macrocarpon HOM05D007174 ORTHO05D009061 1.1e-64 250.8 201 61.2
Glyma.09G147500 Glycine max HOM05D007174 ORTHO05D009061 1.4e-64 250.4 240 55.8
COL.COLO4_14250 Corchorus olitorius HOM05D000059 ORTHO05D005093 3.1e-64 249.2 209 59.3
Potri.012G134500 Populus trichocarpa HOM05D007174 ORTHO05D009061 4.1e-64 248.8 238 55.5
arahy.Tifrunner.gnm1.ann1.AW02WS Arachis hypogaea HOM05D007174 ORTHO05D009061 5.3e-64 248.4 193 62.2
FAN06G1461 Fragaria x ananassa HOM05D000059 ORTHO05D005093 5.3e-64 248.4 221 56.6
PGR142G4376 Punica granatum HOM05D007174 ORTHO05D009061 5.3e-64 248.4 206 60.2
CsaV3_3G016740 Cucumis sativus L. HOM05D007174 ORTHO05D009061 7.0e-64 248.1 239 56.1
Duzib205G1938 Durio zibethinus HOM05D007174 ORTHO05D009061 1.2e-63 247.3 239 54.4
Lalb_Chr19g0131081 Lupinus albus HOM05D007174 ORTHO05D009061 1.2e-63 247.3 183 63.9
FvH4_7g28911 Fragaria vesca HOM05D007174 ORTHO05D009061 1.6e-63 246.9 221 56.6
TPR.G9185 Trifolium pratense HOM05D007174 ORTHO05D009061 1.6e-63 246.9 204 59.3
Lj2g0011010 Lotus japonicus HOM05D007174 ORTHO05D009061 2.0e-63 246.5 229 54.1
MELO3C006867.2 Cucumis melo HOM05D007174 ORTHO05D009061 2.7e-63 246.1 238 56.3
DCAR_018153 Daucus carota HOM05D007174 ORTHO05D009061 3.5e-63 245.7 208 57.2
Sed0014335 Sechium edule HOM05D002642 ORTHO05D002834 3.5e-63 245.7 234 56.0
Phvul.004G122400 Phaseolus vulgaris HOM05D007174 ORTHO05D009061 4.5e-63 245.4 243 54.7
Migut.F00385 Erythranthe guttata HOM05D007174 ORTHO05D009061 7.7e-63 244.6 211 58.8
FAN03G3394 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.0e-62 244.2 221 55.7
Gorai.008G280800 Gossypium raimondii HOM05D007174 ORTHO05D009061 1.3e-62 243.8 204 59.3
Sabra12G0101100 Salix brachista HOM05D007174 ORTHO05D009061 1.3e-62 243.8 238 55.0
Ciclev10005753m.g Citrus clementina HOM05D007174 ORTHO05D009061 2.2e-62 243.0 210 57.1
Dinv28496 Davidia involucrata HOM05D000059 ORTHO05D005093 2.2e-62 243.0 230 55.2
Nitab4.5_0008764g0010 Nicotiana tabacum HOM05D007174 ORTHO05D009061 2.2e-62 243.0 237 51.9
Peaxi162Scf00648g00220 Petunia axillaris HOM05D007174 ORTHO05D009061 2.2e-62 243.0 203 57.1
Lj6g0017578 Lotus japonicus HOM05D007174 ORTHO05D009061 5.0e-62 241.9 229 53.3
SalBow4G1508 Salvia bowleyana HOM05D007174 ORTHO05D009061 5.0e-62 241.9 208 59.1
Sopen03g005220 Solanum pennellii HOM05D007174 ORTHO05D009061 8.5e-62 241.1 203 55.2
CANSAT21G1580 Cannabis sativa HOM05D007174 ORTHO05D009061 1.1e-61 240.7 199 61.3
Lj1A990G55 Lonicera japonica HOM05D007174 ORTHO05D009061 1.1e-61 240.7 187 61.5
CiPaw.04G068400 Carya illinoinensis HOM05D007174 ORTHO05D009061 1.5e-61 240.4 228 56.1
FAN01G2691 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.9e-61 240.0 181 61.9
Gohir.A12G261100 Gossypium hirsutum HOM05D007174 ORTHO05D009061 2.5e-61 239.6 204 57.8
RcHm_v2.0_Chr1g0376581 Rosa chinensis HOM05D007174 ORTHO05D009061 2.5e-61 239.6 221 55.7
Atru.chr1.537 Acer truncatum HOM05D007174 ORTHO05D009061 5.5e-61 238.4 217 56.2
VMungo0464G0116 Vigna mungo HOM05D007174 ORTHO05D009061 5.5e-61 238.4 204 59.8
Aqoxy7G00468 Aquilegia oxysepala HOM05D007174 ORTHO05D009061 7.2e-61 238.0 225 52.9
FAN03G1635 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.6e-60 236.9 221 54.3
HanXRQChr15g0473391 Helianthus annuus HOM05D000003 ORTHO05D000004 2.7e-60 236.1 194 60.3
Nitab4.5_0000832g0170 Nicotiana tabacum HOM05D007174 ORTHO05D009061 2.7e-60 236.1 203 55.2
MSTRG.27141 Avicennia marina HOM05D007174 ORTHO05D009061 3.6e-60 235.7 212 55.2
Lsat_1_v5_gn_9_53840 Lactuca sativa HOM05D007174 ORTHO05D009061 3.6e-60 235.7 194 60.3
Zm00001eb187200 Zea mays HOM05D007174 ORTHO05D009061 3.6e-60 235.7 188 58.5
Manes.14G029900 Manihot esculenta HOM05D007174 ORTHO05D009061 4.7e-60 235.3 197 59.4
PGSC0003DMG400014262 Solanum tuberosum HOM05D007174 ORTHO05D009061 4.7e-60 235.3 203 53.7
CAN.G548.22 Capsicum annuum HOM05D007174 ORTHO05D009061 6.1e-60 235.0 237 49.8
FAN10G2932 Fragaria x ananassa HOM05D000059 ORTHO05D005093 6.1e-60 235.0 221 53.8
EL10Ac3g05680 Beta vulgaris HOM05D007174 ORTHO05D009061 4.0e-59 232.3 204 55.4
GSVIVG01010637001 Vitis vinifera HOM05D007174 ORTHO05D009061 8.8e-59 231.1 231 51.9
AUR62016040 Chenopodium quinoa HOM05D007174 ORTHO05D009061 1.5e-58 230.3 177 61.0
TWI23G0481 Tripterygium wilfordii HOM05D007174 ORTHO05D009061 2.8e-57 226.1 212 56.1
Os02g0677600 Oryza sativa ssp. japonica HOM05D007174 ORTHO05D009061 3.7e-57 225.7 202 55.0
CSS0030220 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 6.3e-57 224.9 196 59.2
BolC2t12246H Brassica oleracea HOM05D007174 ORTHO05D009061 3.1e-56 222.6 214 54.2
Thhalv10004841m.g Eutrema salsugineum HOM05D007174 ORTHO05D009061 3.1e-56 222.6 185 58.9
SEGI_06842 Sequoiadendron giganteum HOM05D007174 ORTHO05D009061 3.1e-56 222.6 187 55.6
A02p42000 Brassica napus HOM05D007174 ORTHO05D009061 5.4e-56 221.9 214 54.2
BraA02t09135Z Brassica rapa HOM05D007174 ORTHO05D009061 5.4e-56 221.9 214 54.2
AL8G38920 Arabidopsis lyrata HOM05D007174 ORTHO05D009061 1.6e-55 220.3 235 50.2
Carub.0008s2281 Capsella rubella HOM05D007174 ORTHO05D009061 1.6e-55 220.3 235 49.8
BcaB07g29797 Brassica carinata HOM05D007174 ORTHO05D009061 3.5e-55 219.2 218 52.3
Actinidia03101 Actinidia chinensis HOM05D007174 ORTHO05D009061 4.5e-55 218.8 166 63.9
BcaC03g18123 Brassica carinata HOM05D007174 ORTHO05D009061 5.9e-55 218.4 214 52.8
Cc02_g03460 Coffea canephora HOM05D007174 ORTHO05D009061 5.9e-55 218.4 217 50.7
Haze_13772 Corylus avellana HOM05D007174 ORTHO05D009061 1.0e-54 217.6 240 50.4
AT5G62140 Arabidopsis thaliana HOM05D007174 ORTHO05D009061 1.3e-54 217.2 211 54.0
Sc25g0000350 Simmondsia chinensis HOM05D007174 ORTHO05D009061 1.3e-54 217.2 239 50.6
THA.LOC104826810 Tarenaya hassleriana HOM05D007174 ORTHO05D009061 2.3e-54 216.5 194 56.7
Sp2g25310 Schrenkiella parvula HOM05D007174 ORTHO05D009061 3.8e-54 215.7 211 53.6
CARHR275910 Cardamine hirsuta HOM05D007174 ORTHO05D009061 8.6e-54 214.5 220 51.4
arahy.Tifrunner.gnm1.ann1.09T8EW Arachis hypogaea HOM05D007174 ORTHO05D009061 1.9e-53 213.4 196 56.6
SGA_v2.0_scaffold2G01087 Striga asiatica HOM05D007174 ORTHO05D009061 7.2e-53 211.5 198 54.0
Mapoly0145s0018 Marchantia polymorpha HOM05D007174 ORTHO05D009061 6.3e-49 198.4 178 52.2
AagrBONN_evm.TU.Sc2ySwM_228.5753 Anthoceros agrestis HOM05D007174 ORTHO05D009061 1.4e-48 197.2 192 51.6
arahy.Tifrunner.gnm1.ann1.JY00AE Arachis hypogaea HOM05D007174 ORTHO05D009061 3.2e-48 196.1 203 50.2
Pp3c13_6960 Physcomitrium patens HOM05D007174 ORTHO05D009061 5.9e-47 191.8 199 50.3
ECA232G4749 Erigeron canadensis HOM05D007174 ORTHO05D009061 5.0e-46 188.7 138 63.8
Oeu030133.1 Olea europaea HOM05D007174 ORTHO05D009061 1.5e-45 187.2 142 59.2
SMO137G0111 Selaginella moellendorffii HOM05D007174 ORTHO05D009061 2.0e-42 176.8 180 47.8
CBR_g53539 Chara braunii HOM05D007174 ORTHO05D009061 5.4e-40 168.7 185 45.9
Pp3c4_22170 Physcomitrium patens HOM05D007174 ORTHO05D009061 1.2e-39 167.5 193 45.6
unitig_747.g21761 Utricularia gibba HOM05D007174 ORTHO05D009061 2.0e-39 166.8 189 46.6
Sc13g0008390 Simmondsia chinensis HOM05D007174 ORTHO05D009061 1.1e-37 161.0 180 46.7
Gohir.D12G262000 Gossypium hirsutum HOM05D007174 ORTHO05D009061 6.2e-36 155.2 204 43.6
EL10Ac3g05682 Beta vulgaris HOM05D007174 ORTHO05D009061 3.9e-30 136.0 210 39.0
Cre01.g019600 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 2.8e-28 129.8 174 42.0
arahy.Tifrunner.gnm1.ann1.U0QS20 Arachis hypogaea HOM05D007174 ORTHO05D009061 2.0e-26 123.6 209 37.8
HanXRQChr15g0482681 Helianthus annuus HOM05D007174 ORTHO05D009061 7.6e-26 121.7 135 46.7
Sc13g0008380 Simmondsia chinensis HOM05D007174 ORTHO05D009061 3.7e-25 119.4 233 33.9
AUR62021246 Chenopodium quinoa HOM05D007174 ORTHO05D009061 4.9e-25 119.0 86 61.6
Solyc03g026330.4 Solanum lycopersicum HOM05D007174 ORTHO05D009061 1.9e-24 117.1 112 50.0
arahy.Tifrunner.gnm1.ann1.BIF85U Arachis hypogaea HOM05D007174 ORTHO05D009061 6.6e-22 108.6 83 57.8
Aa31LG11G1430 Aethionema arabicum HOM05D007174 ORTHO05D009061 3.8e-17 92.8 68 63.2
CDE01G0613 Ceratophyllum demersum HOM05D007174 ORTHO05D009061 1.1e-16 91.3 92 50.0
MCO06G097 Micromonas commoda HOM05D007174 ORTHO05D009061 1.3e-14 84.3 205 31.2
Pp3c26_1960 Physcomitrium patens HOM05D007174 ORTHO05D009061 3.9e-14 82.8 95 43.2
SEGI_30770 Sequoiadendron giganteum HOM05D000501 ORTHO05D009061 4.8e-12 75.9 77 50.6
arahy.Tifrunner.gnm1.ann1.3M52EB Arachis hypogaea HOM05D007174 ORTHO05D010441 4.6e-07 59.3 61 49.2


User provided reference genes

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