Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0757G111 Amborella trichopoda HOM05D006363 ORTHO05D007920 2.1e-109 399.1 203 100.0
Lj8C25T12 Lonicera japonica HOM05D006363 ORTHO05D007920 7.1e-57 224.6 199 59.3
Psat6g200600 Pisum sativum HOM05D006363 ORTHO05D007920 2.7e-56 222.6 199 59.3
Rhsim09G0197500 Rhododendron simsii HOM05D006363 ORTHO05D007920 2.7e-56 222.6 199 60.8
Thhalv10015742m.g Eutrema salsugineum HOM05D006363 ORTHO05D007920 1.7e-55 219.9 204 56.4
Sp6g14440 Schrenkiella parvula HOM05D006363 ORTHO05D007920 1.7e-55 219.9 202 56.9
BcaB01g04190 Brassica carinata HOM05D006363 ORTHO05D007920 2.3e-55 219.5 200 59.0
BcaC01g06171 Brassica carinata HOM05D006363 ORTHO05D007920 6.6e-55 218.0 200 58.5
BolC3t14244H Brassica oleracea HOM05D006363 ORTHO05D007920 6.6e-55 218.0 200 58.5
Dinv28459 Davidia involucrata HOM05D006363 ORTHO05D007920 8.7e-55 217.6 203 56.2
ECA238G0548 Erigeron canadensis HOM05D006363 ORTHO05D007920 8.7e-55 217.6 204 57.4
BraA03t10870Z Brassica rapa HOM05D006363 ORTHO05D007920 1.1e-54 217.2 200 58.5
C03p18470 Brassica napus HOM05D006363 ORTHO05D007920 1.9e-54 216.5 200 58.5
Medtr1g100753 Medicago truncatula HOM05D006363 ORTHO05D007920 1.9e-54 216.5 204 55.4
Aqoxy7G00395 Aquilegia oxysepala HOM05D006363 ORTHO05D007920 4.3e-54 215.3 206 55.8
HanXRQChr14g0462221 Helianthus annuus HOM05D006363 ORTHO05D007920 4.3e-54 215.3 200 58.5
Sed0019375 Sechium edule HOM05D006363 ORTHO05D007920 5.6e-54 214.9 203 58.6
CsaV3_3G016980 Cucumis sativus L. HOM05D006363 ORTHO05D007920 7.3e-54 214.5 205 56.6
Duzib205G1779 Durio zibethinus HOM05D006363 ORTHO05D007920 9.6e-54 214.2 206 56.8
FAN10G0438 Fragaria x ananassa HOM05D006363 ORTHO05D007920 9.6e-54 214.2 203 60.1
Aa31LG3G8570 Aethionema arabicum HOM05D006363 ORTHO05D007920 1.3e-53 213.8 199 58.3
FvH4_7g29240 Fragaria vesca HOM05D006363 ORTHO05D007920 1.6e-53 213.4 203 59.6
FAN06G3284 Fragaria x ananassa HOM05D006363 ORTHO05D007920 1.6e-53 213.4 203 59.6
FAN06G3928 Fragaria x ananassa HOM05D006363 ORTHO05D007920 1.6e-53 213.4 203 59.6
Peaxi162Scf00915g00018 Petunia axillaris HOM05D006363 ORTHO05D007920 1.6e-53 213.4 197 58.9
Ciclev10007013m.g Citrus clementina HOM05D006363 ORTHO05D007920 2.1e-53 213.0 200 56.5
vmacro09843 Vaccinium macrocarpon HOM05D006363 ORTHO05D007920 3.6e-53 212.2 199 57.8
MBI04_g04731_MAGBIO Magnolia biondii HOM05D006363 ORTHO05D007920 4.8e-53 211.8 207 53.6
MELO3C006895.2 Cucumis melo HOM05D006363 ORTHO05D007920 6.2e-53 211.5 205 56.1
RcHm_v2.0_Chr1g0376991 Rosa chinensis HOM05D006363 ORTHO05D007920 6.2e-53 211.5 199 59.3
THA.LOC104811988 Tarenaya hassleriana HOM05D006363 ORTHO05D007920 6.2e-53 211.5 199 56.3
Lsat_1_v5_gn_2_133820 Lactuca sativa HOM05D006363 ORTHO05D007920 8.1e-53 211.1 207 56.5
TWI39G0139 Tripterygium wilfordii HOM05D006363 ORTHO05D007920 8.1e-53 211.1 204 57.4
Ca_10782_v3 Cicer arietinum L. HOM05D006363 ORTHO05D007920 1.1e-52 210.7 200 57.0
Migut.F01133 Erythranthe guttata HOM05D006363 ORTHO05D007920 1.1e-52 210.7 198 56.1
COL.COLO4_14288 Corchorus olitorius HOM05D006363 ORTHO05D007920 1.4e-52 210.3 202 55.9
FAN03G1027 Fragaria x ananassa HOM05D006363 ORTHO05D007920 1.4e-52 210.3 203 59.1
Nn6g34197 Nelumbo nucifera HOM05D006363 ORTHO05D007920 1.4e-52 210.3 204 55.4
Cfa008303 Carpinus fangiana HOM05D006363 ORTHO05D007920 2.4e-52 209.5 202 56.4
Carub.0008s1228 Capsella rubella HOM05D006363 ORTHO05D007920 3.1e-52 209.1 201 56.7
DCAR_018188 Daucus carota HOM05D006363 ORTHO05D007920 3.1e-52 209.1 203 56.7
Thecc.03G174500 Theobroma cacao HOM05D006363 ORTHO05D007920 6.9e-52 208.0 200 55.5
GSVIVG01010552001 Vitis vinifera HOM05D006363 ORTHO05D007920 9.0e-52 207.6 201 55.7
LjContig00238g0019616 Lotus japonicus HOM05D006363 ORTHO05D007920 1.2e-51 207.2 202 54.5
TPR.G14326 Trifolium pratense HOM05D006363 ORTHO05D007920 1.5e-51 206.8 199 56.8
unitig_60.g25545 Utricularia gibba HOM05D006363 ORTHO05D007920 1.5e-51 206.8 199 58.3
CARHR265110 Cardamine hirsuta HOM05D006363 ORTHO05D007920 2.6e-51 206.1 201 54.2
PGR042G3170 Punica granatum HOM05D006363 ORTHO05D007920 2.6e-51 206.1 206 54.4
Atru.chr1.482 Acer truncatum HOM05D006363 ORTHO05D007920 3.4e-51 205.7 203 54.7
CSS0002932 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 3.4e-51 205.7 199 56.3
Eucgr.A02801 Eucalyptus grandis HOM05D006363 ORTHO05D007920 3.4e-51 205.7 208 56.7
Gohir.A12G258900 Gossypium hirsutum HOM05D006363 ORTHO05D007920 3.4e-51 205.7 202 56.4
Gorai.008G278600 Gossypium raimondii HOM05D006363 ORTHO05D007920 3.4e-51 205.7 202 56.4
Haze_13734 Corylus avellana HOM05D006363 ORTHO05D007920 4.4e-51 205.3 202 55.4
Potri.015G140600 Populus trichocarpa HOM05D006363 ORTHO05D007920 4.4e-51 205.3 202 53.0
QL09p014582 Quercus lobata HOM05D006363 ORTHO05D007920 4.4e-51 205.3 203 54.7
Nitab4.5_0001508g0030 Nicotiana tabacum HOM05D006363 ORTHO05D007920 5.8e-51 204.9 197 56.9
Prupe.2G292400 Prunus persica HOM05D006363 ORTHO05D007920 5.8e-51 204.9 208 57.2
Cpa.g.sc107.33 Carica papaya HOM05D006363 ORTHO05D007920 7.6e-51 204.5 202 55.4
Gohir.D12G260100 Gossypium hirsutum HOM05D006363 ORTHO05D007920 7.6e-51 204.5 202 55.9
Oeu062762.2 Olea europaea HOM05D006363 ORTHO05D007920 9.9e-51 204.1 202 55.0
Solyc03g025990.1 Solanum lycopersicum HOM05D006363 ORTHO05D007920 9.9e-51 204.1 198 56.1
Lalb_Chr02g0140961 Lupinus albus HOM05D006363 ORTHO05D007920 1.3e-50 203.8 196 57.1
MD07G1266800 Malus domestica HOM05D006363 ORTHO05D007920 1.3e-50 203.8 199 57.8
Os04g0568600 Oryza sativa ssp. japonica HOM05D006363 ORTHO05D007920 1.3e-50 203.8 197 59.4
Sabra15G0151200 Salix brachista HOM05D006363 ORTHO05D007920 1.3e-50 203.8 207 53.1
Zm00001eb428810 Zea mays HOM05D006363 ORTHO05D007920 1.3e-50 203.8 208 58.2
AUR62016007 Chenopodium quinoa HOM05D006363 ORTHO05D007920 1.7e-50 203.4 197 56.3
CiPaw.03G104700 Carya illinoinensis HOM05D006363 ORTHO05D007920 2.9e-50 202.6 202 55.4
EL10Ac3g05667 Beta vulgaris HOM05D006363 ORTHO05D007920 3.8e-50 202.2 197 55.8
CSS0028509 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 3.8e-50 202.2 203 56.2
AUR62021214 Chenopodium quinoa HOM05D006363 ORTHO05D007920 3.8e-50 202.2 199 55.3
Nitab4.5_0000716g0210 Nicotiana tabacum HOM05D006363 ORTHO05D007920 3.8e-50 202.2 196 55.6
PSO782G5704 Papaver somniferum HOM05D006363 ORTHO05D007920 4.9e-50 201.8 215 52.6
Sopen03g004810 Solanum pennellii HOM05D006363 ORTHO05D007920 4.9e-50 201.8 198 55.1
Cc03_g13850 Coffea canephora HOM05D006363 ORTHO05D007920 6.4e-50 201.4 203 53.2
FAN03G1282 Fragaria x ananassa HOM05D006363 ORTHO05D007920 8.4e-50 201.1 203 58.1
PGSC0003DMG400014325 Solanum tuberosum HOM05D006363 ORTHO05D007920 1.4e-49 200.3 198 55.1
Glyma.20G157100 Glycine max HOM05D006363 ORTHO05D007920 1.9e-49 199.9 199 53.3
AL8G26570 Arabidopsis lyrata HOM05D006363 ORTHO05D007920 3.2e-49 199.1 208 53.8
Manes.07G111200 Manihot esculenta HOM05D006363 ORTHO05D007920 4.2e-49 198.7 196 54.6
VMungo0720G1872 Vigna mungo HOM05D006363 ORTHO05D007920 9.3e-49 197.6 201 53.2
AT5G52190 Arabidopsis thaliana HOM05D006363 ORTHO05D007920 1.2e-48 197.2 204 52.9
MD01G1199000 Malus domestica HOM05D006363 ORTHO05D007920 1.2e-48 197.2 204 54.4
Glyma.10G237500 Glycine max HOM05D006363 ORTHO05D007920 1.6e-48 196.8 200 52.5
Phvul.007G068100 Phaseolus vulgaris HOM05D006363 ORTHO05D007920 1.6e-48 196.8 199 53.3
Pp3c6_24270 Physcomitrium patens HOM05D006363 ORTHO05D007920 2.1e-48 196.4 211 49.8
MSTRG.8448 Avicennia marina HOM05D006363 ORTHO05D007920 2.7e-48 196.1 201 54.7
PSO478G1739 Papaver somniferum HOM05D006363 ORTHO05D007920 3.5e-48 195.7 214 51.4
CAN.G947.11 Capsicum annuum HOM05D006363 ORTHO05D007920 4.6e-48 195.3 196 56.6
SEGI_31787 Sequoiadendron giganteum HOM05D006363 ORTHO05D007920 2.3e-47 193.0 202 53.0
CANSAT21G2254 Cannabis sativa HOM05D006363 ORTHO05D007920 2.5e-46 189.5 200 54.0
CANSAT21G0627 Cannabis sativa HOM05D006363 ORTHO05D007920 5.6e-46 188.3 200 55.0
TAR375G0304 Trochodendron aralioides HOM05D006363 ORTHO05D007920 5.6e-46 188.3 187 55.1
HPP92_021110 Vanilla planifolia HOM05D006363 ORTHO05D007920 2.1e-45 186.4 184 54.3
Ah.13g075440 Amaranthus hybridus HOM05D006363 ORTHO05D007920 2.8e-45 186.0 187 55.1
CDE04G1845 Ceratophyllum demersum HOM05D006363 ORTHO05D007920 7.6e-43 177.9 186 54.3
SMO367G0077 Selaginella moellendorffii HOM05D006363 ORTHO05D007920 4.6e-40 168.7 168 54.8
A03p15800 Brassica napus HOM05D006363 ORTHO05D007920 8.1e-37 157.9 143 59.4
FAN01G1422 Fragaria x ananassa HOM05D006363 ORTHO05D007920 1.9e-33 146.7 198 46.0
SalBow2G2214 Salvia bowleyana HOM05D006363 ORTHO05D007920 1.3e-31 140.6 149 50.3
Mapoly0047s0087 Marchantia polymorpha HOM05D006363 ORTHO05D007920 1.9e-30 136.7 104 65.4
Sc25g0000440 Simmondsia chinensis HOM05D006363 ORTHO05D007920 3.7e-29 132.5 159 50.3
A08p37210 Brassica napus HOM05D006363 ORTHO05D007920 1.8e-28 130.2 137 51.1
BcaC01g06168 Brassica carinata HOM05D006363 ORTHO05D007920 4.3e-22 109.0 95 57.9
Pp3c17_12800 Physcomitrium patens HOM05D006363 ORTHO05D007920 1.5e-19 100.5 114 49.1
BcaC06g36545 Brassica carinata HOM05D006363 ORTHO05D007920 4.6e-16 89.0 86 55.8
BolC5t32613H Brassica oleracea HOM05D006363 ORTHO05D007920 6.7e-15 85.1 66 65.2
C05p38730 Brassica napus HOM05D006363 ORTHO05D007920 1.5e-14 84.0 66 65.2
TPR.G33086 Trifolium pratense HOM05D006363 ORTHO05D007920 7.7e-11 71.6 59 57.6
TAR614G0003 Trochodendron aralioides HOM05D006363 ORTHO05D007920 2.2e-10 70.1 61 52.5
BcaC01g06167 Brassica carinata HOM05D006363 ORTHO05D007920 1.4e-09 67.4 46 65.2
TAR633G0106 Trochodendron aralioides HOM05D006363 ORTHO05D007920 3.2e-09 66.2 61 50.8
TAR291G0005 Trochodendron aralioides HOM05D006363 ORTHO05D007920 7.2e-09 65.1 61 50.8
TAR375G0495 Trochodendron aralioides HOM05D006363 ORTHO05D007920 7.2e-09 65.1 61 50.8
TAR624G1193 Trochodendron aralioides HOM05D006363 ORTHO05D007920 7.2e-09 65.1 61 50.8
TAR383G0849 Trochodendron aralioides HOM05D003653 ORTHO05D004249 9.4e-09 64.7 61 50.8
TAR633G1276 Trochodendron aralioides HOM05D006363 ORTHO05D007920 9.4e-09 64.7 69 49.3
Actinidia03116 Actinidia chinensis HOM05D006363 ORTHO05D007920 4.7e-08 62.4 106 39.6
TAR629G0450 Trochodendron aralioides HOM05D006363 ORTHO05D007920 6.1e-08 62.0 61 49.2
BcaC05g27871 Brassica carinata HOM05D006363 ORTHO05D007920 1.5e-06 57.4 88 43.2


User provided reference genes

Program Settings