Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0757G103 Amborella trichopoda HOM05D000015 ORTHO05D069427 3.6e-57 224.6 103 100.0
ATR0757G100 Amborella trichopoda HOM05D000015 ORTHO05D000803 6.4e-14 80.9 42 83.3
ATR0807G144 Amborella trichopoda HOM05D000015 ORTHO05D012917 2.3e-11 72.4 37 83.8
ATR0757G082 Amborella trichopoda HOM05D000015 ORTHO05D012917 1.1e-10 70.1 42 69.0
ATR0757G097 Amborella trichopoda HOM05D000015 ORTHO05D000803 1.5e-10 69.7 42 71.4
ATR0757G193 Amborella trichopoda HOM05D000015 ORTHO05D000803 5.6e-10 67.8 42 69.0
ATR0757G187 Amborella trichopoda HOM05D000015 ORTHO05D000803 8.1e-09 63.9 37 70.3
ATR0855G002 Amborella trichopoda HOM05D000015 ORTHO05D012917 1.8e-08 62.8 37 75.7
ATR0807G136 Amborella trichopoda HOM05D000015 ORTHO05D000803 2.4e-08 62.4 37 73.0
Lalb_Chr13g0292291 Lupinus albus HOM05D000015 ORTHO05D000249 4.5e-07 58.2 46 56.5
Lalb_Chr13g0292301 Lupinus albus HOM05D000015 ORTHO05D000249 4.5e-07 58.2 46 56.5
Lalb_Chr13g0292311 Lupinus albus HOM05D000015 ORTHO05D000249 4.5e-07 58.2 46 56.5
Lalb_Chr13g0292321 Lupinus albus HOM05D000015 ORTHO05D000249 4.5e-07 58.2 46 56.5
Lalb_Chr13g0292331 Lupinus albus HOM05D000015 ORTHO05D000249 4.5e-07 58.2 46 56.5
Lalb_Chr13g0292341 Lupinus albus HOM05D000015 ORTHO05D000249 4.5e-07 58.2 46 56.5
Lalb_Chr13g0292351 Lupinus albus HOM05D000015 ORTHO05D000249 4.5e-07 58.2 46 56.5
Lalb_Chr13g0292361 Lupinus albus HOM05D000015 ORTHO05D000249 4.5e-07 58.2 46 56.5
Lalb_Chr13g0292371 Lupinus albus HOM05D000015 ORTHO05D000249 4.5e-07 58.2 46 56.5
Lalb_Chr13g0292381 Lupinus albus HOM05D000015 ORTHO05D000249 4.5e-07 58.2 46 56.5
GSVIVG01028435001 Vitis vinifera HOM05D000015 ORTHO05D008807 1.3e-06 56.6 40 62.5
Cc01_g17760 Coffea canephora HOM05D000015 ORTHO05D008807 1.7e-06 56.2 39 64.1
PGR031G2260 Punica granatum HOM05D000015 ORTHO05D008807 1.7e-06 56.2 40 62.5
SalBow6G6445 Salvia bowleyana HOM05D000015 ORTHO05D000734 1.7e-06 56.2 48 52.1
RcHm_v2.0_Chr6g0286551 Rosa chinensis HOM05D000015 ORTHO05D008807 2.2e-06 55.8 40 65.0
CDE11G1158 Ceratophyllum demersum HOM05D000015 ORTHO05D000249 2.9e-06 55.5 40 55.0
SalBow6G3420 Salvia bowleyana HOM05D000015 ORTHO05D000734 2.9e-06 55.5 48 52.1
AUR62028929 Chenopodium quinoa HOM05D000015 ORTHO05D000249 3.8e-06 55.1 44 56.8
Lalb_Chr08g0235271 Lupinus albus HOM05D000015 ORTHO05D046558 3.8e-06 55.1 46 52.2
Lalb_Chr08g0235281 Lupinus albus HOM05D000015 ORTHO05D000249 3.8e-06 55.1 46 52.2
Lalb_Chr08g0235291 Lupinus albus HOM05D000015 ORTHO05D000249 3.8e-06 55.1 46 52.2
Lalb_Chr08g0235301 Lupinus albus HOM05D000015 ORTHO05D000249 3.8e-06 55.1 46 52.2
Nn6g35694 Nelumbo nucifera HOM05D000015 ORTHO05D000249 3.8e-06 55.1 46 50.0
QL12p016261 Quercus lobata HOM05D000015 ORTHO05D000803 3.8e-06 55.1 54 48.1
Sed0015797 Sechium edule HOM05D000015 ORTHO05D008807 3.8e-06 55.1 40 62.5
PGSC0003DMG400035001 Solanum tuberosum HOM05D000015 ORTHO05D008807 3.8e-06 55.1 40 60.0
ATR0584G104 Amborella trichopoda HOM05D000015 ORTHO05D000734 4.9e-06 54.7 63 49.2
AagrBONN_evm.TU.Sc2ySwM_228.420 Anthoceros agrestis HOM05D000015 ORTHO05D001173 4.9e-06 54.7 38 57.9
CANSAT01G0298 Cannabis sativa HOM05D000015 ORTHO05D008807 4.9e-06 54.7 40 65.0
Cpa.g.sc87.34 Carica papaya HOM05D000015 ORTHO05D008807 4.9e-06 54.7 40 62.5
FvH4_6g01061 Fragaria vesca HOM05D000015 ORTHO05D000734 4.9e-06 54.7 59 45.8
FAN05G4234 Fragaria x ananassa HOM05D000015 ORTHO05D000734 4.9e-06 54.7 59 45.8
FAN05G4562 Fragaria x ananassa HOM05D000015 ORTHO05D000734 4.9e-06 54.7 59 45.8
FAN14G2064 Fragaria x ananassa HOM05D000015 ORTHO05D000734 4.9e-06 54.7 59 45.8
Phvul.001G165266 Phaseolus vulgaris HOM05D000015 ORTHO05D008807 4.9e-06 54.7 38 68.4
RcHm_v2.0_Chr2g0105881 Rosa chinensis HOM05D000015 ORTHO05D000734 4.9e-06 54.7 39 59.0
Solyc09g064490.3 Solanum lycopersicum HOM05D000015 ORTHO05D008807 4.9e-06 54.7 40 60.0
TWI34G0403 Tripterygium wilfordii HOM05D000015 ORTHO05D000249 4.9e-06 54.7 45 51.1
VMungo1383G2418 Vigna mungo HOM05D000015 ORTHO05D008807 4.9e-06 54.7 38 68.4
Ah.08g213620 Amaranthus hybridus HOM05D000015 ORTHO05D008807 6.4e-06 54.3 40 62.5
CDE02G1622 Ceratophyllum demersum HOM05D000015 ORTHO05D000249 6.4e-06 54.3 39 56.4
Dinv19265 Davidia involucrata HOM05D000015 ORTHO05D008807 6.4e-06 54.3 40 60.0
Eucgr.C00800 Eucalyptus grandis HOM05D000015 ORTHO05D000249 6.4e-06 54.3 43 58.1
FAN02G0918 Fragaria x ananassa HOM05D000015 ORTHO05D000734 6.4e-06 54.3 59 45.8
Lalb_Chr08g0232611 Lupinus albus HOM05D000015 ORTHO05D000249 6.4e-06 54.3 49 51.0
MD08G1088000 Malus domestica HOM05D000015 ORTHO05D000249 6.4e-06 54.3 37 64.9
Nitab4.5_0000845g0200 Nicotiana tabacum HOM05D000015 ORTHO05D008807 6.4e-06 54.3 40 57.5
Oeu026807.1 Olea europaea HOM05D000015 ORTHO05D008807 6.4e-06 54.3 40 57.5
Oeu056815.1 Olea europaea HOM05D000015 ORTHO05D000803 6.4e-06 54.3 37 67.6
Potri.002G256300 Populus trichocarpa HOM05D000015 ORTHO05D008807 6.4e-06 54.3 40 60.0
Cc02_g34660 Coffea canephora HOM05D000015 ORTHO05D000734 8.4e-06 53.9 37 67.6
Cc08_g12010 Coffea canephora HOM05D000015 ORTHO05D000803 8.4e-06 53.9 37 64.9
MELO3C005606.2 Cucumis melo HOM05D000015 ORTHO05D000803 8.4e-06 53.9 37 67.6
Dinv39299 Davidia involucrata HOM05D000015 ORTHO05D000734 8.4e-06 53.9 33 69.7
Eucgr.A01319 Eucalyptus grandis HOM05D000015 ORTHO05D008807 8.4e-06 53.9 40 60.0
Lalb_Chr08g0232791 Lupinus albus HOM05D000015 ORTHO05D000249 8.4e-06 53.9 45 55.6
MD15G1285300 Malus domestica HOM05D000015 ORTHO05D000734 8.4e-06 53.9 38 65.8
Nitab4.5_0002538g0080 Nicotiana tabacum HOM05D000015 ORTHO05D008807 8.4e-06 53.9 52 51.9
Nitab4.5_0007835g0010 Nicotiana tabacum HOM05D000015 ORTHO05D000249 8.4e-06 53.9 79 40.5
Peaxi162Scf00043g00254 Petunia axillaris HOM05D000015 ORTHO05D008807 8.4e-06 53.9 40 60.0
Potri.001G113700 Populus trichocarpa HOM05D000015 ORTHO05D000803 8.4e-06 53.9 39 64.1
Sopen03g041260 Solanum pennellii HOM05D000015 ORTHO05D000249 8.4e-06 53.9 77 41.6
Zm00001eb249930 Zea mays HOM05D000015 ORTHO05D000803 8.4e-06 53.9 44 56.8


User provided reference genes

Program Settings