Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0757G068 Amborella trichopoda HOM05D005649 ORTHO05D006837 5.0e-54 214.2 106 100.0
EL10Ac3g05710 Beta vulgaris HOM05D005649 ORTHO05D006837 8.9e-19 97.1 83 53.0
Sc13g0008480 Simmondsia chinensis HOM05D005649 ORTHO05D006837 6.4e-17 90.9 82 50.0
Ah.07g209060 Amaranthus hybridus HOM05D005649 ORTHO05D006837 8.3e-17 90.5 99 45.5
Gohir.A12G260100 Gossypium hirsutum HOM05D005649 ORTHO05D006837 1.1e-16 90.1 81 54.3
Gohir.D09G040900 Gossypium hirsutum HOM05D005649 ORTHO05D006837 1.4e-16 89.7 84 53.6
Lalb_Chr19g0130991 Lupinus albus HOM05D005649 ORTHO05D006837 1.4e-16 89.7 98 50.0
TPR.G17428 Trifolium pratense HOM05D005649 ORTHO05D006837 1.4e-16 89.7 80 52.5
CiPaw.04G066700 Carya illinoinensis HOM05D005649 ORTHO05D006837 1.9e-16 89.4 81 50.6
Duzib068G0970 Durio zibethinus HOM05D005649 ORTHO05D006837 2.4e-16 89.0 67 62.7
Actinidia03109 Actinidia chinensis HOM05D005649 ORTHO05D006837 4.1e-16 88.2 83 50.6
SalBow6G0552 Salvia bowleyana HOM05D000001 ORTHO05D010467 4.1e-16 88.2 70 57.1
Lalb_Chr01g0009161 Lupinus albus HOM05D005649 ORTHO05D006837 5.4e-16 87.8 81 54.3
Potri.015G139100 Populus trichocarpa HOM05D005649 ORTHO05D006837 5.4e-16 87.8 83 53.0
SalBow6G6599 Salvia bowleyana HOM05D000001 ORTHO05D010467 5.4e-16 87.8 70 55.7
Gohir.D12G260900 Gossypium hirsutum HOM05D005649 ORTHO05D006837 9.2e-16 87.0 81 51.9
Gorai.008G279600 Gossypium raimondii HOM05D005649 ORTHO05D006837 9.2e-16 87.0 81 51.9
TAR629G2474 Trochodendron aralioides HOM05D005649 ORTHO05D006837 9.2e-16 87.0 82 48.8
AUR62021224 Chenopodium quinoa HOM05D005649 ORTHO05D006837 1.2e-15 86.7 87 48.3
Thecc.03G171600 Theobroma cacao HOM05D005649 ORTHO05D006837 1.2e-15 86.7 86 48.8
Sed0000609 Sechium edule HOM05D005649 ORTHO05D006837 2.1e-15 85.9 81 54.3
AUR62016019 Chenopodium quinoa HOM05D005649 ORTHO05D006837 2.7e-15 85.5 85 49.4
Haze_13744 Corylus avellana HOM05D005649 ORTHO05D006837 2.7e-15 85.5 84 50.0
Lsat_1_v5_gn_2_132960 Lactuca sativa HOM05D005649 ORTHO05D006837 2.7e-15 85.5 77 50.6
CSS0017664 Camellia sinensis var. sinensis HOM05D005649 ORTHO05D006837 3.5e-15 85.1 81 51.9
Duzib084G1193 Durio zibethinus HOM05D005649 ORTHO05D006837 3.5e-15 85.1 82 50.0
COL.COLO4_14273 Corchorus olitorius HOM05D005649 ORTHO05D006837 4.6e-15 84.7 83 51.8
HanXRQChr14g0462161 Helianthus annuus HOM05D005649 ORTHO05D006837 4.6e-15 84.7 80 50.0
Sabra15G0150200 Salix brachista HOM05D005649 ORTHO05D006837 4.6e-15 84.7 83 50.6
Oeu062770.1 Olea europaea HOM05D005649 ORTHO05D006837 6.0e-15 84.3 81 50.6
THA.LOC109117151 Tarenaya hassleriana HOM05D005649 ORTHO05D006837 6.0e-15 84.3 82 48.8
Gohir.A11G009800 Gossypium hirsutum HOM05D005649 ORTHO05D006837 7.8e-15 84.0 83 50.6
Gohir.D11G009100 Gossypium hirsutum HOM05D005649 ORTHO05D006837 7.8e-15 84.0 83 50.6
Gorai.007G010700 Gossypium raimondii HOM05D005649 ORTHO05D006837 7.8e-15 84.0 83 50.6
SalBow2G3129 Salvia bowleyana HOM05D005649 ORTHO05D006837 7.8e-15 84.0 85 48.2
Aqoxy7G00428 Aquilegia oxysepala HOM05D005649 ORTHO05D006837 1.0e-14 83.6 82 51.2
Migut.F01138 Erythranthe guttata HOM05D005649 ORTHO05D006837 1.0e-14 83.6 86 45.3
Atru.chr1.509 Acer truncatum HOM05D005649 ORTHO05D006837 1.3e-14 83.2 82 48.8
CAN.G769.4 Capsicum annuum HOM05D005649 ORTHO05D006837 1.3e-14 83.2 81 50.6
Nitab4.5_0002107g0070 Nicotiana tabacum HOM05D005649 ORTHO05D006837 1.3e-14 83.2 83 49.4
CARHR265080 Cardamine hirsuta HOM05D005649 ORTHO05D006837 1.7e-14 82.8 79 50.6
Phvul.004G120100 Phaseolus vulgaris HOM05D005649 ORTHO05D006837 1.7e-14 82.8 95 45.3
AL8G26550 Arabidopsis lyrata HOM05D005649 ORTHO05D006837 3.0e-14 82.0 82 48.8
Potri.012G137400 Populus trichocarpa HOM05D005649 ORTHO05D006837 3.9e-14 81.6 82 48.8
CsaV3_3G016880 Cucumis sativus L. HOM05D005649 ORTHO05D006837 5.1e-14 81.3 81 54.3
Dinv35188 Davidia involucrata HOM05D005649 ORTHO05D006837 5.1e-14 81.3 83 44.6
Medtr1g101360 Medicago truncatula HOM05D005649 ORTHO05D006837 6.6e-14 80.9 84 52.4
Nn1g01375 Nelumbo nucifera HOM05D005649 ORTHO05D006837 6.6e-14 80.9 83 50.6
Hma1.2p1_1323F.1_g275520 Hydrangea macrophylla HOM05D005649 ORTHO05D006837 8.6e-14 80.5 102 41.2
Prupe.2G290900 Prunus persica HOM05D005649 ORTHO05D006837 8.6e-14 80.5 84 44.0
Sp6g14410 Schrenkiella parvula HOM05D005649 ORTHO05D006837 8.6e-14 80.5 81 44.4
Carub.0008s1225 Capsella rubella HOM05D005649 ORTHO05D006837 1.5e-13 79.7 62 56.5
Ciclev10006307m.g Citrus clementina HOM05D005649 ORTHO05D006837 1.5e-13 79.7 81 43.2
MELO3C006883.2 Cucumis melo HOM05D005649 ORTHO05D006837 1.5e-13 79.7 81 54.3
PGR042G0682 Punica granatum HOM05D005649 ORTHO05D006837 1.5e-13 79.7 77 50.6
Eucgr.K00231 Eucalyptus grandis HOM05D005649 ORTHO05D006837 1.9e-13 79.3 79 45.6
Aa31LG2G14300 Aethionema arabicum HOM05D005649 ORTHO05D006837 3.3e-13 78.6 82 42.7
Lj2g0004156 Lotus japonicus HOM05D005649 ORTHO05D006837 3.3e-13 78.6 84 52.4
MD01G1197500 Malus domestica HOM05D005649 ORTHO05D006837 3.3e-13 78.6 82 45.1
BraA03t10871Z Brassica rapa HOM05D005649 ORTHO05D006837 4.3e-13 78.2 78 48.7
CiPaw.03G103300 Carya illinoinensis HOM05D005649 ORTHO05D006837 4.3e-13 78.2 82 47.6
DCAR_018179 Daucus carota HOM05D005649 ORTHO05D006837 4.3e-13 78.2 84 46.4
AT5G52160 Arabidopsis thaliana HOM05D005649 ORTHO05D006837 7.3e-13 77.4 82 50.0
BcaB01g04189 Brassica carinata HOM05D005649 ORTHO05D006837 7.3e-13 77.4 81 43.2
BcaC01g06166 Brassica carinata HOM05D005649 ORTHO05D006837 7.3e-13 77.4 81 43.2
BcaC01g06170 Brassica carinata HOM05D005649 ORTHO05D006837 7.3e-13 77.4 81 43.2
C03p18480 Brassica napus HOM05D005649 ORTHO05D006837 7.3e-13 77.4 62 51.6
BolC3t14245H Brassica oleracea HOM05D005649 ORTHO05D006837 7.3e-13 77.4 81 43.2
CANSAT21G0877 Cannabis sativa HOM05D005649 ORTHO05D006837 7.3e-13 77.4 79 44.3
CAN.G28.8 Capsicum annuum HOM05D005649 ORTHO05D006837 7.3e-13 77.4 62 50.0
Nn8g41026 Nelumbo nucifera HOM05D005649 ORTHO05D006837 7.3e-13 77.4 81 45.7
Thhalv10015124m.g Eutrema salsugineum HOM05D005649 ORTHO05D006837 9.5e-13 77.0 62 53.2
A03p15810 Brassica napus HOM05D005649 ORTHO05D006837 1.2e-12 76.6 81 43.2
PSO782G2995 Papaver somniferum HOM05D005649 ORTHO05D006837 1.2e-12 76.6 83 43.4
Psat0s6119g0040 Pisum sativum HOM05D005649 ORTHO05D006837 1.2e-12 76.6 82 50.0
RcHm_v2.0_Chr1g0376811 Rosa chinensis HOM05D005649 ORTHO05D006837 1.2e-12 76.6 82 46.3
CDE11G0782 Ceratophyllum demersum HOM05D005649 ORTHO05D006837 1.6e-12 76.3 80 42.5
Manes.14G028300 Manihot esculenta HOM05D005649 ORTHO05D006837 1.6e-12 76.3 81 45.7
Peaxi162Scf00040g00425 Petunia axillaris HOM05D005649 ORTHO05D006837 1.6e-12 76.3 81 45.7
Solyc06g035820.1 Solanum lycopersicum HOM05D005649 ORTHO05D006837 1.6e-12 76.3 62 48.4
A10p09850 Brassica napus HOM05D005649 ORTHO05D006837 2.1e-12 75.9 62 51.6
BraA10t43066Z Brassica rapa HOM05D005649 ORTHO05D006837 2.1e-12 75.9 62 51.6
Sed0025700 Sechium edule HOM05D005649 ORTHO05D006837 2.8e-12 75.5 76 50.0
SGA_v2.0_scaffold10G05368 Striga asiatica HOM05D005649 ORTHO05D006837 2.8e-12 75.5 83 45.8
C09p41580 Brassica napus HOM05D005649 ORTHO05D006837 3.6e-12 75.1 81 42.0
BolC9t57041H Brassica oleracea HOM05D005649 ORTHO05D006837 3.6e-12 75.1 79 45.6
PSO478G4859 Papaver somniferum HOM05D005649 ORTHO05D006837 3.6e-12 75.1 82 43.9
DCAR_018177 Daucus carota HOM05D005649 ORTHO05D006837 4.7e-12 74.7 84 42.9
Glyma.16G197100 Glycine max HOM05D005649 ORTHO05D006837 4.7e-12 74.7 64 54.7
PSO782G3448 Papaver somniferum HOM05D005649 ORTHO05D006837 4.7e-12 74.7 82 43.9
Solyc03g026115.1 Solanum lycopersicum HOM05D005649 ORTHO05D006837 4.7e-12 74.7 86 46.5
BcaB08g35564 Brassica carinata HOM05D005649 ORTHO05D006837 6.2e-12 74.3 61 50.8
HPP92_025495 Vanilla planifolia HOM05D005649 ORTHO05D006837 6.2e-12 74.3 84 48.8
DCAR_014595 Daucus carota HOM05D005649 ORTHO05D006837 1.1e-11 73.6 86 38.4
PGSC0003DMG400004517 Solanum tuberosum HOM05D000087 ORTHO05D000439 1.1e-11 73.6 62 46.8
AL6G17460 Arabidopsis lyrata HOM05D005649 ORTHO05D006837 2.3e-11 72.4 83 44.6
Ca_10790_v3 Cicer arietinum L. HOM05D005649 ORTHO05D006837 2.3e-11 72.4 84 45.2
Migut.F00365 Erythranthe guttata HOM05D005649 ORTHO05D006837 2.3e-11 72.4 66 50.0
Thhalv10005193m.g Eutrema salsugineum HOM05D005649 ORTHO05D006837 2.3e-11 72.4 81 39.5
Glyma.09G144000 Glycine max HOM05D005649 ORTHO05D006837 2.3e-11 72.4 82 43.9
CARHR275870 Cardamine hirsuta HOM05D005649 ORTHO05D006837 3.1e-11 72.0 79 43.0
Cc02_g03310 Coffea canephora HOM05D005649 ORTHO05D006837 4.0e-11 71.6 84 47.6
Nitab4.5_0004480g0060 Nicotiana tabacum HOM05D005649 ORTHO05D006837 4.0e-11 71.6 81 43.2
HPP92_025369 Vanilla planifolia HOM05D005649 ORTHO05D006837 4.0e-11 71.6 64 54.7
FvH4_7g29091 Fragaria vesca HOM05D005649 ORTHO05D006837 6.8e-11 70.9 82 43.9
FAN03G0279 Fragaria x ananassa HOM05D005649 ORTHO05D006837 6.8e-11 70.9 82 43.9
TWI63G0636 Tripterygium wilfordii HOM05D005649 ORTHO05D006837 6.8e-11 70.9 84 46.4
CARHR205910 Cardamine hirsuta HOM05D005649 ORTHO05D006837 8.9e-11 70.5 83 44.6
Solyc01g009590.3 Solanum lycopersicum HOM05D005649 ORTHO05D006837 8.9e-11 70.5 64 46.9
Sopen01g005120 Solanum pennellii HOM05D005649 ORTHO05D006837 8.9e-11 70.5 64 46.9
Actinidia34088 Actinidia chinensis HOM05D005649 ORTHO05D006837 1.2e-10 70.1 64 48.4
Carub.0008s2276 Capsella rubella HOM05D005649 ORTHO05D006837 1.2e-10 70.1 79 41.8
AL8G38860 Arabidopsis lyrata HOM05D005649 ORTHO05D006837 2.0e-10 69.3 63 47.6
AT5G62080 Arabidopsis thaliana HOM05D005649 ORTHO05D006837 2.0e-10 69.3 63 47.6
CAN.G166.5 Capsicum annuum HOM05D005649 ORTHO05D006837 2.0e-10 69.3 80 42.5
AT5G07230 Arabidopsis thaliana HOM05D005649 ORTHO05D006837 3.4e-10 68.6 83 42.2
BcaC06g32460 Brassica carinata HOM05D005649 ORTHO05D006837 4.4e-10 68.2 81 39.5
Aa31LG3G8540 Aethionema arabicum HOM05D005649 ORTHO05D006837 5.8e-10 67.8 81 38.3
Cpa.g.sc107.18 Carica papaya HOM05D005649 ORTHO05D006837 5.8e-10 67.8 83 45.8
Sp6g35660 Schrenkiella parvula HOM05D005649 ORTHO05D006837 5.8e-10 67.8 65 44.6
Carub.0006s0617 Capsella rubella HOM05D005649 ORTHO05D006837 9.9e-10 67.0 63 47.6
Thhalv10015126m.g Eutrema salsugineum HOM05D005649 ORTHO05D006837 9.9e-10 67.0 81 40.7
Aa31LG2G14310 Aethionema arabicum HOM05D005649 ORTHO05D006837 1.7e-09 66.2 73 46.6
QL09p014765 Quercus lobata HOM05D005649 ORTHO05D006837 1.7e-09 66.2 80 41.2
TAR636G3290 Trochodendron aralioides HOM05D000087 ORTHO05D000439 2.2e-09 65.9 79 46.8
Sp2g25250 Schrenkiella parvula HOM05D005649 ORTHO05D006837 2.9e-09 65.5 97 37.1
FAN03G1726 Fragaria x ananassa HOM05D005649 ORTHO05D006837 6.4e-09 64.3 52 51.9
A10p28990 Brassica napus HOM05D005649 ORTHO05D006837 1.1e-08 63.5 62 41.9
C09p69350 Brassica napus HOM05D005649 ORTHO05D006837 1.1e-08 63.5 62 41.9
BolC9t59679H Brassica oleracea HOM05D005649 ORTHO05D006837 1.1e-08 63.5 62 41.9
BraA10t44947Z Brassica rapa HOM05D005649 ORTHO05D006837 1.1e-08 63.5 62 41.9
Peaxi162Scf00132g01516 Petunia axillaris HOM05D005649 ORTHO05D006837 1.1e-08 63.5 74 45.9
PSO782G4359 Papaver somniferum HOM05D005649 ORTHO05D006837 1.6e-07 59.7 83 36.1


User provided reference genes

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