Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0757G063 Amborella trichopoda HOM05D006822 ORTHO05D008884 4.5e-242 840.9 441 100.0
Dinv32391 Davidia involucrata HOM05D004001 ORTHO05D004559 1.8e-113 413.7 371 56.6
CSS0016394 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 8.3e-111 404.8 384 55.5
Cfa001701 Carpinus fangiana HOM05D006822 ORTHO05D008884 1.6e-106 390.6 374 55.6
Rhsim07G0025500 Rhododendron simsii HOM05D006822 ORTHO05D008884 3.6e-106 389.4 376 53.5
GSVIVG01027532001 Vitis vinifera HOM05D006822 ORTHO05D008884 3.6e-106 389.4 384 53.4
vmacro13383 Vaccinium macrocarpon HOM05D006822 ORTHO05D008884 2.0e-104 383.6 376 53.7
TAR375G1023 Trochodendron aralioides HOM05D006822 ORTHO05D008884 2.6e-104 383.3 382 54.2
Haze_16833 Corylus avellana HOM05D006822 ORTHO05D008884 3.4e-104 382.9 375 55.7
Aqoxy7G00564 Aquilegia oxysepala HOM05D006822 ORTHO05D008884 4.4e-104 382.5 387 53.0
Hma1.2p1_0053F.1_g030830 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 1.3e-103 380.9 377 54.1
Gohir.A08G031700 Gossypium hirsutum HOM05D006822 ORTHO05D008884 1.7e-103 380.6 383 53.3
PSO478G2587 Papaver somniferum HOM05D006822 ORTHO05D008884 1.7e-103 380.6 380 52.9
Gohir.D08G042800 Gossypium hirsutum HOM05D006822 ORTHO05D008884 6.4e-103 378.6 380 54.7
Ciclev10019178m.g Citrus clementina HOM05D006822 ORTHO05D008884 8.3e-103 378.3 386 53.4
Gorai.004G041400 Gossypium raimondii HOM05D006822 ORTHO05D008884 1.1e-102 377.9 380 54.7
Cc02_g36520 Coffea canephora HOM05D006822 ORTHO05D008884 1.4e-102 377.5 385 53.0
Hma1.2p1_0053F.1_g030820 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 1.4e-102 377.5 393 53.2
Lj7A526T89 Lonicera japonica HOM05D006822 ORTHO05D008884 1.4e-102 377.5 378 53.2
CAN.G170.5 Capsicum annuum HOM05D006822 ORTHO05D008884 5.4e-102 375.6 387 51.2
Duzib133G0703 Durio zibethinus HOM05D006822 ORTHO05D008884 5.4e-102 375.6 379 55.4
Ah.05g175170 Amaranthus hybridus HOM05D006822 ORTHO05D008884 7.1e-102 375.2 380 53.2
Sopen01g037280 Solanum pennellii HOM05D006822 ORTHO05D008884 1.2e-101 374.4 386 50.8
Thecc.01G374100 Theobroma cacao HOM05D006822 ORTHO05D008884 1.6e-101 374.0 387 53.0
Peaxi162Scf00021g01312 Petunia axillaris HOM05D006822 ORTHO05D008884 2.7e-101 373.2 380 52.9
Sc23g0003500 Simmondsia chinensis HOM05D006822 ORTHO05D008884 3.5e-101 372.9 378 53.2
Manes.01G264800 Manihot esculenta HOM05D006822 ORTHO05D008884 4.6e-101 372.5 380 52.1
QL08p051944 Quercus lobata HOM05D006822 ORTHO05D008884 4.6e-101 372.5 388 52.6
Solyc01g091510.4 Solanum lycopersicum HOM05D006822 ORTHO05D008884 7.8e-101 371.7 381 51.4
CANSAT56G1004 Cannabis sativa HOM05D006822 ORTHO05D008884 1.3e-100 370.9 393 50.9
CsaV3_3G009540 Cucumis sativus L. HOM05D006822 ORTHO05D008884 1.3e-100 370.9 378 52.1
ClCG05G002100 Citrullus lanatus HOM05D006822 ORTHO05D008884 3.9e-100 369.4 385 51.7
PGSC0003DMG401012750 Solanum tuberosum HOM05D006822 ORTHO05D008884 6.6e-100 368.6 380 50.0
CiPaw.01G260400 Carya illinoinensis HOM05D006822 ORTHO05D008884 8.6e-100 368.2 376 53.2
MELO3C006175.2 Cucumis melo HOM05D006822 ORTHO05D008884 8.6e-100 368.2 374 51.3
Oeu003493.1 Olea europaea HOM05D006822 ORTHO05D008884 8.6e-100 368.2 370 53.0
Prupe.2G147600 Prunus persica HOM05D006822 ORTHO05D008884 9.5e-99 364.8 393 52.7
Cpa.g.sc18.138 Carica papaya HOM05D006822 ORTHO05D008884 1.6e-98 364.0 382 53.1
Nitab4.5_0004320g0040 Nicotiana tabacum HOM05D006822 ORTHO05D008884 1.6e-98 364.0 379 49.9
PGR031G1001 Punica granatum HOM05D006822 ORTHO05D008884 2.1e-98 363.6 371 53.1
TWI14G1233 Tripterygium wilfordii HOM05D006822 ORTHO05D008884 2.8e-98 363.2 382 52.6
SGA_v2.0_scaffold95G28889 Striga asiatica HOM05D006822 ORTHO05D008884 3.6e-98 362.8 387 50.4
Nitab4.5_0013912g0010 Nicotiana tabacum HOM05D006822 ORTHO05D008884 4.7e-98 362.5 396 49.5
Migut.B01651 Erythranthe guttata HOM05D006822 ORTHO05D008884 8.1e-98 361.7 397 50.1
Sed0020963 Sechium edule HOM05D006822 ORTHO05D008884 1.1e-97 361.3 377 53.6
Hund27354 Selenicereus undatus HOM05D006822 ORTHO05D008884 1.8e-97 360.5 303 58.7
AUR62013615 Chenopodium quinoa HOM05D006822 ORTHO05D008884 2.3e-97 360.1 304 58.9
Glyma.09G267800 Glycine max HOM05D006822 ORTHO05D008884 5.2e-97 359.0 387 49.6
Os04g0574600 Oryza sativa ssp. japonica HOM05D006822 ORTHO05D008884 4.4e-96 355.9 379 50.4
EL10Ac1g00937 Beta vulgaris HOM05D006822 ORTHO05D008884 9.9e-96 354.8 376 53.5
CDE11G0821 Ceratophyllum demersum HOM05D006822 ORTHO05D008884 1.3e-95 354.4 384 49.2
HanXRQChr04g0122211 Helianthus annuus HOM05D006822 ORTHO05D008884 1.3e-95 354.4 364 51.1
Atru.chr5.328 Acer truncatum HOM05D006822 ORTHO05D008884 1.7e-95 354.0 365 53.2
AUR62004233 Chenopodium quinoa HOM05D006822 ORTHO05D008884 1.7e-95 354.0 380 49.7
Sabra02G0118500 Salix brachista HOM05D006822 ORTHO05D008884 1.7e-95 354.0 380 50.8
Eucgr.D02443 Eucalyptus grandis HOM05D006822 ORTHO05D008884 2.2e-95 353.6 380 51.3
Phvul.008G075100 Phaseolus vulgaris HOM05D006822 ORTHO05D008884 3.7e-95 352.8 389 49.1
Zm00001eb073430 Zea mays HOM05D006822 ORTHO05D008884 4.9e-95 352.4 374 51.3
Glyma.18G222100 Glycine max HOM05D006822 ORTHO05D008884 1.9e-94 350.5 382 50.8
Potri.002G149800 Populus trichocarpa HOM05D006822 ORTHO05D008884 1.9e-94 350.5 381 50.4
HPP92_015074 Vanilla planifolia HOM05D006822 ORTHO05D008884 2.4e-94 350.1 368 50.5
Ca_07832_v3 Cicer arietinum L. HOM05D006822 ORTHO05D008884 7.1e-94 348.6 386 51.6
TPR.G26925 Trifolium pratense HOM05D006822 ORTHO05D008884 1.2e-93 347.8 371 51.5
COL.COLO4_12575 Corchorus olitorius HOM05D006822 ORTHO05D008884 2.7e-93 346.7 326 56.1
Lsat_1_v5_gn_7_7481 Lactuca sativa HOM05D006822 ORTHO05D008884 3.9e-92 342.8 384 50.5
AT1G01930 Arabidopsis thaliana HOM05D006822 ORTHO05D008884 5.1e-92 342.4 381 49.3
arahy.Tifrunner.gnm1.ann1.K16L32 Arachis hypogaea HOM05D006822 ORTHO05D008884 1.9e-91 340.5 311 56.6
Lalb_Chr01g0021331 Lupinus albus HOM05D006822 ORTHO05D008884 1.9e-91 340.5 382 48.7
RcHm_v2.0_Chr1g0350861 Rosa chinensis HOM05D006822 ORTHO05D008884 1.9e-91 340.5 383 52.0
MBI04_g46545_MAGBIO Magnolia biondii HOM05D006822 ORTHO05D008884 3.3e-91 339.7 279 62.7
arahy.Tifrunner.gnm1.ann1.485MU0 Arachis hypogaea HOM05D006822 ORTHO05D008884 5.6e-91 339.0 311 56.6
MD02G1201200 Malus domestica HOM05D006822 ORTHO05D008884 9.6e-91 338.2 312 56.1
THA.LOC104817014 Tarenaya hassleriana HOM05D006822 ORTHO05D008884 1.2e-90 337.8 298 58.4
VMungo1383G2566 Vigna mungo HOM05D006822 ORTHO05D008884 1.4e-89 334.3 382 47.4
Medtr7g075170 Medicago truncatula HOM05D006822 ORTHO05D008884 8.9e-89 331.6 376 48.7
FvH4_7g12110 Fragaria vesca HOM05D006822 ORTHO05D008884 1.2e-88 331.3 383 50.4
Sp1g00370 Schrenkiella parvula HOM05D006822 ORTHO05D008884 1.2e-88 331.3 313 55.6
Psat3g115280 Pisum sativum HOM05D006822 ORTHO05D008884 1.5e-88 330.9 377 49.6
FAN06G2864 Fragaria x ananassa HOM05D006822 ORTHO05D008884 2.0e-88 330.5 383 50.4
Nn1g01174 Nelumbo nucifera HOM05D006822 ORTHO05D008884 3.4e-88 329.7 276 59.4
Lsat_1_v5_gn_3_133341 Lactuca sativa HOM05D006822 ORTHO05D008884 7.6e-88 328.6 371 49.3
Lj1g0013249 Lotus japonicus HOM05D006822 ORTHO05D008884 7.6e-88 328.6 310 56.5
AL1G10390 Arabidopsis lyrata HOM05D006822 ORTHO05D008884 9.9e-88 328.2 380 48.7
FAN01G0942 Fragaria x ananassa HOM05D006822 ORTHO05D008884 1.3e-87 327.8 383 50.1
Carub.0001s0031 Capsella rubella HOM05D006822 ORTHO05D008884 3.8e-87 326.2 380 47.9
Eucgr.L02337 Eucalyptus grandis HOM05D006822 ORTHO05D008884 1.4e-86 324.3 282 59.2
HanXRQChr13g0425441 Helianthus annuus HOM05D006822 ORTHO05D008884 2.7e-85 320.1 366 48.6
Medtr7g075185 Medicago truncatula HOM05D006822 ORTHO05D008884 3.9e-84 316.2 383 47.5
Aa31LG1G11250 Aethionema arabicum HOM05D006822 ORTHO05D008884 5.1e-84 315.8 416 44.7
Thhalv10007219m.g Eutrema salsugineum HOM05D006822 ORTHO05D008884 5.1e-84 315.8 311 53.1
CSS0048598 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 7.3e-83 312.0 284 57.0
COL.COLO4_05508 Corchorus olitorius HOM05D006822 ORTHO05D008884 3.1e-81 306.6 391 45.8
C08p53940 Brassica napus HOM05D006822 ORTHO05D008884 5.3e-81 305.8 314 52.2
BolC8t52907H Brassica oleracea HOM05D006822 ORTHO05D008884 5.3e-81 305.8 314 52.2
BraA09t42269Z Brassica rapa HOM05D006822 ORTHO05D008884 5.3e-81 305.8 314 51.9
ECA236G3401 Erigeron canadensis HOM05D006822 ORTHO05D008884 3.8e-79 299.7 275 55.3
SEGI_38546 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 7.9e-77 292.0 332 47.6
unitig_22.g5376 Utricularia gibba HOM05D006822 ORTHO05D008884 6.6e-76 288.9 318 50.3
Actinidia31423 Actinidia chinensis HOM05D006822 ORTHO05D008884 3.3e-75 286.6 360 45.6
Pp3c3_38070 Physcomitrium patens HOM05D006822 ORTHO05D008884 2.0e-64 250.8 293 46.4
Mapoly0008s0196 Marchantia polymorpha HOM05D006822 ORTHO05D008884 7.9e-61 238.8 317 44.5
AagrBONN_evm.TU.Sc2ySwM_117.565 Anthoceros agrestis HOM05D006822 ORTHO05D008884 2.5e-59 233.8 354 41.2
CARHR000420 Cardamine hirsuta HOM05D006822 ORTHO05D008884 2.5e-59 233.8 308 46.8
ECA240G3107 Erigeron canadensis HOM05D006822 ORTHO05D008884 1.3e-58 231.5 303 45.5
FAN03G3111 Fragaria x ananassa HOM05D006822 ORTHO05D008884 4.3e-51 206.5 383 35.8
Cre07.g325715 Chlamydomonas reinhardtii HOM05D006822 ORTHO05D008884 1.0e-39 168.7 326 36.5
Cfa022202 Carpinus fangiana HOM05D006822 ORTHO05D004559 2.7e-29 134.0 351 31.6
PRCOL_00005597 Prasinoderma coloniale HOM05D006822 ORTHO05D008884 1.1e-25 122.1 228 37.3
Medtr7g075430 Medicago truncatula HOM05D006822 ORTHO05D008884 7.2e-22 109.4 168 41.1
CARHR000430 Cardamine hirsuta HOM05D006822 ORTHO05D008884 4.4e-19 100.1 77 57.1
FAN10G0810 Fragaria x ananassa HOM05D006822 ORTHO05D008884 4.4e-19 100.1 87 52.9
SEGI_35234 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 3.2e-14 84.0 82 48.8
arahy.Tifrunner.gnm1.ann1.EYK22X Arachis hypogaea HOM05D006822 ORTHO05D008884 2.3e-12 77.8 50 66.0


User provided reference genes

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