Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0757G052 Amborella trichopoda HOM05D006581 ORTHO05D007870 0.0e+00 1630.2 836 100.0
TAR629G0084 Trochodendron aralioides HOM05D006581 ORTHO05D007870 7.9e-195 684.9 799 48.9
Nn3g19980 Nelumbo nucifera HOM05D006581 ORTHO05D007870 1.8e-194 683.7 834 47.2
MBI12_g26094_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 1.1e-193 681.0 812 48.5
RcHm_v2.0_Chr4g0398711 Rosa chinensis HOM05D006581 ORTHO05D007870 4.3e-185 652.5 798 46.4
Cc03_g06340 Coffea canephora HOM05D006581 ORTHO05D007870 1.6e-184 650.6 822 44.4
PSO782G3179 Papaver somniferum HOM05D006581 ORTHO05D007870 3.7e-184 649.4 812 45.8
FvH4_4g06790 Fragaria vesca HOM05D006581 ORTHO05D007870 4.8e-184 649.0 802 45.6
FAN12G3574 Fragaria x ananassa HOM05D006581 ORTHO05D007870 4.8e-184 649.0 802 45.6
Hma1.2p1_0017F.1_g011220 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 2.4e-183 646.7 798 47.1
Potri.008G016000 Populus trichocarpa HOM05D006581 ORTHO05D007870 2.4e-183 646.7 819 45.7
QL12p015968 Quercus lobata HOM05D006581 ORTHO05D007870 2.4e-183 646.7 843 45.4
Cpa.g.sc33.130 Carica papaya HOM05D006581 ORTHO05D007870 6.9e-183 645.2 807 45.4
Aqoxy7G00548 Aquilegia oxysepala HOM05D006581 ORTHO05D007870 2.6e-182 643.3 829 45.1
Nitab4.5_0010186g0020 Nicotiana tabacum HOM05D006581 ORTHO05D007870 4.5e-182 642.5 812 44.8
PSO478G1557 Papaver somniferum HOM05D006581 ORTHO05D007870 4.5e-182 642.5 810 45.2
Sabra08G0009700 Salix brachista HOM05D006581 ORTHO05D007870 7.7e-182 641.7 819 45.5
Lj8A253T47 Lonicera japonica HOM05D006581 ORTHO05D007870 1.7e-181 640.6 802 45.5
Prupe.1G071100 Prunus persica HOM05D006581 ORTHO05D007870 5.0e-181 639.0 825 45.2
Ciclev10014277m.g Citrus clementina HOM05D006581 ORTHO05D007870 2.5e-180 636.7 833 44.4
Thecc.10G119000 Theobroma cacao HOM05D006581 ORTHO05D007870 2.5e-180 636.7 802 45.9
Actinidia27421 Actinidia chinensis HOM05D006581 ORTHO05D007870 9.4e-180 634.8 791 47.2
GSVIVG01019912001 Vitis vinifera HOM05D006581 ORTHO05D007870 9.4e-180 634.8 821 45.8
MD15G1394600 Malus domestica HOM05D006581 ORTHO05D007870 1.2e-179 634.4 800 45.6
Duzib128G1875 Durio zibethinus HOM05D006581 ORTHO05D007870 2.7e-179 633.3 809 45.4
Haze_09013 Corylus avellana HOM05D006581 ORTHO05D007870 7.9e-179 631.7 799 45.9
PGSC0003DMG400003942 Solanum tuberosum HOM05D006581 ORTHO05D007870 1.8e-178 630.6 847 42.9
Cfa012052 Carpinus fangiana HOM05D006581 ORTHO05D007870 3.0e-178 629.8 799 46.1
CiPaw.08G049100 Carya illinoinensis HOM05D006581 ORTHO05D007870 5.1e-178 629.0 796 45.5
Solyc08g079810.4 Solanum lycopersicum HOM05D006581 ORTHO05D007870 5.1e-178 629.0 845 43.0
Atru.chr12.1085 Acer truncatum HOM05D006581 ORTHO05D007870 6.7e-178 628.6 812 44.7
Peaxi162Scf00620g00237 Petunia axillaris HOM05D006581 ORTHO05D007870 1.5e-177 627.5 798 44.7
Sopen08g028170 Solanum pennellii HOM05D006581 ORTHO05D007870 1.5e-177 627.5 805 44.2
Gorai.N007200 Gossypium raimondii HOM05D006581 ORTHO05D007870 2.5e-177 626.7 819 45.4
Rhsim07G0097400 Rhododendron simsii HOM05D006581 ORTHO05D007870 1.3e-176 624.4 790 46.1
Gohir.A06G170200 Gossypium hirsutum HOM05D006581 ORTHO05D007870 1.7e-176 624.0 804 45.4
CANSAT78G1168 Cannabis sativa HOM05D006581 ORTHO05D007870 1.4e-175 620.9 793 44.8
Gohir.D06G178000 Gossypium hirsutum HOM05D006581 ORTHO05D007870 3.1e-175 619.8 819 44.9
Nitab4.5_0005167g0030 Nicotiana tabacum HOM05D006581 ORTHO05D007870 2.6e-174 616.7 799 44.3
TWI38G0425 Tripterygium wilfordii HOM05D006581 ORTHO05D007870 1.3e-173 614.4 822 43.3
CsaV3_3G003400 Cucumis sativus L. HOM05D006581 ORTHO05D007870 7.2e-172 608.6 804 42.8
DCAR_000885 Daucus carota HOM05D006581 ORTHO05D007870 7.2e-172 608.6 808 44.8
ClCG00G000120 Citrullus lanatus HOM05D006581 ORTHO05D007870 1.8e-170 604.0 829 42.2
ClCG10G003370 Citrullus lanatus HOM05D006581 ORTHO05D007870 5.1e-170 602.4 829 42.2
THA.LOC104812128 Tarenaya hassleriana HOM05D006581 ORTHO05D007870 2.0e-169 600.5 793 41.9
CARHR067090 Cardamine hirsuta HOM05D006581 ORTHO05D007870 4.4e-169 599.4 810 43.3
MELO3C014006.2 Cucumis melo HOM05D006581 ORTHO05D007870 4.4e-169 599.4 797 43.2
AL2G33810 Arabidopsis lyrata HOM05D006581 ORTHO05D007870 9.7e-169 598.2 816 42.3
Thhalv10018136m.g Eutrema salsugineum HOM05D006581 ORTHO05D007870 1.3e-168 597.8 809 42.8
Hund14684 Selenicereus undatus HOM05D006581 ORTHO05D007870 1.7e-168 597.4 830 42.4
Sed0002136 Sechium edule HOM05D006581 ORTHO05D007870 2.2e-168 597.0 813 42.7
Lj3g0012962 Lotus japonicus HOM05D006581 ORTHO05D007870 4.1e-167 592.8 832 42.5
AT1G73970 Arabidopsis thaliana HOM05D006581 ORTHO05D007870 1.2e-166 591.3 797 42.8
Aa31LG4G4270 Aethionema arabicum HOM05D006581 ORTHO05D007870 2.6e-166 590.1 790 41.9
Oeu001905.1 Olea europaea HOM05D006581 ORTHO05D007870 4.5e-166 589.3 790 43.3
BraA07t31529Z Brassica rapa HOM05D006581 ORTHO05D007870 5.9e-166 589.0 800 43.5
C06p48090 Brassica napus HOM05D003462 ORTHO05D007870 2.2e-165 587.0 818 44.1
A07p39830 Brassica napus HOM05D006581 ORTHO05D007870 3.8e-165 586.3 813 43.3
ECA233G4444 Erigeron canadensis HOM05D006581 ORTHO05D007870 3.8e-165 586.3 792 43.3
Lalb_Chr01g0006991 Lupinus albus HOM05D006581 ORTHO05D007870 5.0e-165 585.9 797 42.7
BolC6t39844H Brassica oleracea HOM05D006581 ORTHO05D007870 1.5e-164 584.3 806 44.2
Carub.0002s2075 Capsella rubella HOM05D006581 ORTHO05D007870 4.2e-164 582.8 818 42.7
arahy.Tifrunner.gnm1.ann1.J373DC Arachis hypogaea HOM05D006581 ORTHO05D007870 2.1e-163 580.5 795 41.8
arahy.Tifrunner.gnm1.ann1.MU0C19 Arachis hypogaea HOM05D006581 ORTHO05D007870 8.0e-163 578.6 795 41.6
BcaC08g46826 Brassica carinata HOM05D006581 ORTHO05D007870 3.0e-162 576.6 808 43.4
Psat7g256920 Pisum sativum HOM05D006581 ORTHO05D007870 3.0e-162 576.6 803 42.8
Ca_14132_v3 Cicer arietinum L. HOM05D006581 ORTHO05D007870 6.7e-162 575.5 807 42.3
Sp5g29170 Schrenkiella parvula HOM05D006581 ORTHO05D007870 2.0e-161 573.9 804 41.7
SGA_v2.0_scaffold196G40922 Striga asiatica HOM05D006581 ORTHO05D007870 2.0e-161 573.9 818 43.4
TPR.G5149 Trifolium pratense HOM05D006581 ORTHO05D007870 4.8e-160 569.3 814 41.8
Manes.10G064500 Manihot esculenta HOM05D006581 ORTHO05D007870 8.2e-160 568.5 838 42.5
Migut.E01071 Erythranthe guttata HOM05D006581 ORTHO05D007870 1.1e-159 568.2 794 41.8
EL10Ac5g12666 Beta vulgaris HOM05D006581 ORTHO05D007870 5.3e-159 565.8 808 41.5
ClCG00G004880 Citrullus lanatus HOM05D006581 ORTHO05D007870 2.0e-158 563.9 769 42.5
Lsat_1_v5_gn_8_138880 Lactuca sativa HOM05D006581 ORTHO05D007870 7.7e-158 562.0 824 41.9
Ah.02g116280 Amaranthus hybridus HOM05D006581 ORTHO05D007870 5.0e-157 559.3 816 42.0
Glyma.06G323200 Glycine max HOM05D006581 ORTHO05D007870 2.3e-154 550.4 797 42.7
VMungo1080G1314 Vigna mungo HOM05D006581 ORTHO05D007870 2.0e-153 547.4 796 43.0
FAN07G0243 Fragaria x ananassa HOM05D006581 ORTHO05D007870 3.4e-153 546.6 801 41.4
Medtr3g010350 Medicago truncatula HOM05D006581 ORTHO05D007870 3.4e-153 546.6 805 41.0
HanXRQChr04g0124681 Helianthus annuus HOM05D006581 ORTHO05D007870 6.3e-152 542.3 747 43.5
COL.COLO4_10009 Corchorus olitorius HOM05D006581 ORTHO05D007870 8.3e-152 542.0 803 41.6
Phvul.005G003000 Phaseolus vulgaris HOM05D006581 ORTHO05D007870 1.8e-151 540.8 800 42.4
unitig_26.g9687 Utricularia gibba HOM05D006581 ORTHO05D007870 8.0e-147 525.4 810 39.1
AUR62040923 Chenopodium quinoa HOM05D006581 ORTHO05D007870 6.8e-146 522.3 741 41.8
MBI12_g05899_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 2.0e-145 520.8 742 43.8
SHI19174 Sapria himalayana HOM05D006581 ORTHO05D007870 2.6e-145 520.4 815 38.8
AUR62004835 Chenopodium quinoa HOM05D006581 ORTHO05D007870 9.8e-145 518.5 746 41.6
CDE05G1723 Ceratophyllum demersum HOM05D006581 ORTHO05D007870 4.7e-139 499.6 792 38.9
Lj8C252T14 Lonicera japonica HOM05D006581 ORTHO05D007870 1.4e-135 488.0 802 39.0
Dinv39047 Davidia involucrata HOM05D006581 ORTHO05D007870 1.3e-133 481.5 654 43.1
SalBow7G1099 Salvia bowleyana HOM05D006581 ORTHO05D007870 2.3e-130 470.7 801 38.2
FAN17G3070 Fragaria x ananassa HOM05D006581 ORTHO05D007870 3.5e-126 456.8 613 43.1
Dinv37725 Davidia involucrata HOM05D006581 ORTHO05D007870 1.1e-119 435.3 613 43.9
Zm00001eb230550 Zea mays HOM05D006581 ORTHO05D007870 1.1e-111 408.7 794 35.5
Sc01g0009010 Simmondsia chinensis HOM05D006581 ORTHO05D007870 1.7e-109 401.4 617 39.5
Hma1.2p1_0017F.1_g011230 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 2.3e-109 401.0 555 44.9
vmacro14025 Vaccinium macrocarpon HOM05D006581 ORTHO05D007870 1.3e-104 385.2 409 49.6
Eucgr.E00519 Eucalyptus grandis HOM05D006581 ORTHO05D007870 2.8e-91 340.9 569 37.8
Medtr4g059740 Medicago truncatula HOM05D006581 ORTHO05D007870 1.9e-84 318.2 519 39.1
CSS0016486 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 7.4e-84 316.2 480 41.2
Ciclev10017584m.g Citrus clementina HOM05D006581 ORTHO05D007870 3.7e-83 313.9 369 46.9
Pp3c5_4510 Physcomitrium patens HOM05D006581 ORTHO05D007870 1.1e-82 312.4 855 29.4
Mapoly0035s0119 Marchantia polymorpha HOM05D006581 ORTHO05D007870 4.6e-78 297.0 919 28.3
Hma1.2p1_0138F.1_g062900 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 8.5e-72 276.2 527 38.3
Migut.J01229 Erythranthe guttata HOM05D006581 ORTHO05D007870 3.7e-67 260.8 260 50.8
Ciclev10006485m.g Citrus clementina HOM05D006581 ORTHO05D007870 2.4e-66 258.1 326 45.1
SMO118G0399 Selaginella moellendorffii HOM05D006581 ORTHO05D007870 1.2e-65 255.8 810 28.1
CSS0026570 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 5.7e-52 210.3 200 54.0
Ciclev10006576m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.3e-51 209.1 311 40.2
SEGI_01852 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 1.8e-50 205.3 589 32.1
Eucgr.E00518 Eucalyptus grandis HOM05D006581 ORTHO05D007870 5.3e-50 203.8 213 52.6
SEGI_20261 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 5.3e-50 203.8 296 42.2
Os02g0123400 Oryza sativa ssp. japonica HOM05D006581 ORTHO05D007870 6.1e-46 190.3 536 30.8
AagrBONN_evm.TU.Sc2ySwM_228.3501 Anthoceros agrestis HOM05D006581 ORTHO05D007870 1.2e-44 186.0 525 26.7
CSS0046982 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 3.3e-44 184.5 480 32.9
ATR0624G037 Amborella trichopoda HOM05D047846 ORTHO05D007870 1.6e-30 139.0 89 78.7
CSS0037330 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 3.8e-24 117.9 206 37.9
ATR0304G026 Amborella trichopoda HOM05D047846 ORTHO05D007870 1.0e-16 93.2 65 70.8
Lj8P252T34 Lonicera japonica HOM05D006581 ORTHO05D007870 1.6e-14 85.9 71 56.3
CBR_g52136 Chara braunii HOM05D006581 ORTHO05D007870 6.2e-14 84.0 304 25.7
Sabra10G0190600 Salix brachista HOM05D006581 ORTHO05D007870 1.1e-07 63.2 155 33.5


User provided reference genes

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