Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0757G041 Amborella trichopoda HOM05D002352 ORTHO05D003724 1.6e-52 209.1 108 100.0
ATR1098G084 Amborella trichopoda HOM05D002352 ORTHO05D003724 5.1e-38 161.0 99 88.9
ATR1127G018 Amborella trichopoda HOM05D002352 ORTHO05D003724 4.8e-36 154.5 97 83.5
TAR626G1549 Trochodendron aralioides HOM05D002352 ORTHO05D003724 3.7e-20 101.7 90 61.1
Aqoxy1G02582 Aquilegia oxysepala HOM05D002352 ORTHO05D003724 1.1e-19 100.1 63 79.4
PSO541G4457 Papaver somniferum HOM05D002352 ORTHO05D003724 5.3e-19 97.8 81 66.7
AUR62016965 Chenopodium quinoa HOM05D002352 ORTHO05D003724 6.9e-19 97.4 63 76.2
Ah.09g235790 Amaranthus hybridus HOM05D002352 ORTHO05D003724 1.5e-18 96.3 76 64.5
AUR62014778 Chenopodium quinoa HOM05D002352 ORTHO05D003724 1.5e-18 96.3 63 74.6
Sc17g0006350 Simmondsia chinensis HOM05D002352 ORTHO05D003724 1.5e-18 96.3 69 69.6
ECA236G2885 Erigeron canadensis HOM05D002352 ORTHO05D003724 2.0e-18 95.9 63 76.2
Sabra11G0146000 Salix brachista HOM05D002352 ORTHO05D003724 2.6e-18 95.5 80 65.0
EL10Ac8g20329 Beta vulgaris HOM05D002352 ORTHO05D003724 3.4e-18 95.1 63 74.6
Haze_05987 Corylus avellana HOM05D002352 ORTHO05D003724 3.4e-18 95.1 63 74.6
Potri.001G443200 Populus trichocarpa HOM05D002352 ORTHO05D003724 3.4e-18 95.1 81 63.0
Potri.011G153700 Populus trichocarpa HOM05D002352 ORTHO05D003724 3.4e-18 95.1 97 56.7
Dinv40531 Davidia involucrata HOM05D002352 ORTHO05D003724 4.5e-18 94.7 63 74.6
Sabra16G0299900 Salix brachista HOM05D002352 ORTHO05D003724 4.5e-18 94.7 81 63.0
Sabra16G0301500 Salix brachista HOM05D002352 ORTHO05D003724 4.5e-18 94.7 81 63.0
Ah.14g089230 Amaranthus hybridus HOM05D002352 ORTHO05D003724 5.9e-18 94.4 93 59.1
GSVIVG01002244001 Vitis vinifera HOM05D002352 ORTHO05D003724 5.9e-18 94.4 63 73.0
HanXRQChr04g0123991 Helianthus annuus HOM05D002352 ORTHO05D003724 7.7e-18 94.0 63 74.6
DCAR_004114 Daucus carota HOM05D002352 ORTHO05D003724 1.0e-17 93.6 101 57.4
PGR004G1771 Punica granatum HOM05D002352 ORTHO05D003724 1.0e-17 93.6 91 58.2
Atru.chr10.646 Acer truncatum HOM05D002352 ORTHO05D003724 1.3e-17 93.2 102 53.9
CSS0019100 Camellia sinensis var. sinensis HOM05D002352 ORTHO05D003724 1.3e-17 93.2 62 75.8
Cpa.g.c36687 Carica papaya HOM05D002352 ORTHO05D003724 1.3e-17 93.2 94 53.2
Cfa000747 Carpinus fangiana HOM05D002352 ORTHO05D003724 1.3e-17 93.2 63 73.0
CiPaw.08G016100 Carya illinoinensis HOM05D002352 ORTHO05D003724 1.3e-17 93.2 81 59.3
MD01G1232200 Malus domestica HOM05D002352 ORTHO05D003724 1.3e-17 93.2 63 73.0
MD07G1304000 Malus domestica HOM05D002352 ORTHO05D003724 1.3e-17 93.2 63 73.0
Ciclev10014013m.g Citrus clementina HOM05D002352 ORTHO05D003724 1.7e-17 92.8 69 65.2
COL.COLO4_22862 Corchorus olitorius HOM05D002352 ORTHO05D003724 1.7e-17 92.8 69 65.2
Eucgr.D00655 Eucalyptus grandis HOM05D002352 ORTHO05D003724 1.7e-17 92.8 70 65.7
QL05p065250 Quercus lobata HOM05D002352 ORTHO05D003724 1.7e-17 92.8 63 73.0
Nn012s41459 Nelumbo nucifera HOM05D002352 ORTHO05D003724 2.2e-17 92.4 63 77.8
Nn1g06636 Nelumbo nucifera HOM05D002352 ORTHO05D003724 2.2e-17 92.4 63 77.8
Thecc.06G016700 Theobroma cacao HOM05D002352 ORTHO05D003724 2.2e-17 92.4 63 71.4
Lalb_Chr02g0152081 Lupinus albus HOM05D002352 ORTHO05D003724 2.9e-17 92.0 63 71.4
Duzib160G0039 Durio zibethinus HOM05D002352 ORTHO05D003724 3.8e-17 91.7 63 69.8
Oeu004743.1 Olea europaea HOM05D002352 ORTHO05D003724 5.0e-17 91.3 81 63.0
Prupe.1G083500 Prunus persica HOM05D002352 ORTHO05D003724 5.0e-17 91.3 63 69.8
CiPaw.07G217200 Carya illinoinensis HOM05D002352 ORTHO05D003724 6.5e-17 90.9 63 69.8
Nitab4.5_0003063g0010 Nicotiana tabacum HOM05D002352 ORTHO05D003724 6.5e-17 90.9 84 58.3
Rhsim02G0123500 Rhododendron simsii HOM05D002352 ORTHO05D003724 6.5e-17 90.9 63 71.4
Hund21252 Selenicereus undatus HOM05D002352 ORTHO05D003724 6.5e-17 90.9 63 71.4
Solyc02g078640.3 Solanum lycopersicum HOM05D002352 ORTHO05D003724 6.5e-17 90.9 63 71.4
Sopen02g023500 Solanum pennellii HOM05D002352 ORTHO05D003724 6.5e-17 90.9 63 71.4
Actinidia39446 Actinidia chinensis HOM05D002352 ORTHO05D003724 8.5e-17 90.5 62 72.6
Glyma.10G207500 Glycine max HOM05D002352 ORTHO05D003724 8.5e-17 90.5 63 69.8
Glyma.20G183400 Glycine max HOM05D002352 ORTHO05D003724 8.5e-17 90.5 63 69.8
Medtr1g094165 Medicago truncatula HOM05D002352 ORTHO05D003724 8.5e-17 90.5 62 72.6
Phvul.007G099200 Phaseolus vulgaris HOM05D002352 ORTHO05D003724 8.5e-17 90.5 63 69.8
Psat6g181080 Pisum sativum HOM05D002352 ORTHO05D003724 8.5e-17 90.5 62 72.6
RcHm_v2.0_Chr1g0383361 Rosa chinensis HOM05D002352 ORTHO05D003724 8.5e-17 90.5 63 69.8
vmacro15889 Vaccinium macrocarpon HOM05D002352 ORTHO05D003724 8.5e-17 90.5 62 72.6
CANSAT21G2414 Cannabis sativa HOM05D002352 ORTHO05D003724 1.1e-16 90.1 84 58.3
Cc02_g12870 Coffea canephora HOM05D002352 ORTHO05D003724 1.1e-16 90.1 63 71.4
Peaxi162Scf00524g00056 Petunia axillaris HOM05D002352 ORTHO05D003724 1.1e-16 90.1 63 69.8
TPR.G10297 Trifolium pratense HOM05D002352 ORTHO05D003724 1.1e-16 90.1 62 72.6
TWI32G1048 Tripterygium wilfordii HOM05D002352 ORTHO05D003724 1.1e-16 90.1 84 59.5
Manes.16G062100 Manihot esculenta HOM05D002352 ORTHO05D003724 1.4e-16 89.7 63 71.4
CAN.G1627.24 Capsicum annuum HOM05D002352 ORTHO05D003724 1.9e-16 89.4 64 70.3
MELO3C007036.2 Cucumis melo HOM05D002352 ORTHO05D003724 1.9e-16 89.4 63 73.0
CsaV3_6G052730 Cucumis sativus L. HOM05D002352 ORTHO05D003724 1.9e-16 89.4 63 73.0
FvH4_7g33390 Fragaria vesca HOM05D002352 ORTHO05D003724 1.9e-16 89.4 63 68.3
FAN01G0441 Fragaria x ananassa HOM05D002352 ORTHO05D003724 1.9e-16 89.4 63 68.3
FAN10G0813 Fragaria x ananassa HOM05D002352 ORTHO05D003724 1.9e-16 89.4 63 68.3
FAN10G3833 Fragaria x ananassa HOM05D002352 ORTHO05D003724 1.9e-16 89.4 63 68.3
Nitab4.5_0009488g0020 Nicotiana tabacum HOM05D002352 ORTHO05D003724 1.9e-16 89.4 83 57.8
Actinidia07573 Actinidia chinensis HOM05D002352 ORTHO05D003724 2.5e-16 89.0 62 72.6
FAN03G0871 Fragaria x ananassa HOM05D002352 ORTHO05D003724 2.5e-16 89.0 63 68.3
arahy.Tifrunner.gnm1.ann1.Q9T26T Arachis hypogaea HOM05D002352 ORTHO05D003724 3.2e-16 88.6 63 68.3
arahy.Tifrunner.gnm1.ann1.XI7UL2 Arachis hypogaea HOM05D002352 ORTHO05D003724 3.2e-16 88.6 63 68.3
Dinv07525 Davidia involucrata HOM05D002352 ORTHO05D003724 3.2e-16 88.6 84 59.5
Lj5g0002534 Lotus japonicus HOM05D002352 ORTHO05D003724 5.5e-16 87.8 63 68.3
Gohir.A05G113200 Gossypium hirsutum HOM05D002352 ORTHO05D003724 7.2e-16 87.4 62 69.4
Gohir.D05G113700 Gossypium hirsutum HOM05D002352 ORTHO05D003724 7.2e-16 87.4 62 69.4
Gorai.009G117700 Gossypium raimondii HOM05D002352 ORTHO05D003724 7.2e-16 87.4 62 69.4
Oeu043710.2 Olea europaea HOM05D002352 ORTHO05D003724 7.2e-16 87.4 84 61.9
MSTRG.15909 Avicennia marina HOM05D002352 ORTHO05D003724 9.4e-16 87.0 113 51.3
ClCG01G025480 Citrullus lanatus HOM05D002352 ORTHO05D003724 9.4e-16 87.0 63 71.4
TWI60G0805 Tripterygium wilfordii HOM05D002352 ORTHO05D003724 9.4e-16 87.0 62 71.0
Lalb_Chr21g0313501 Lupinus albus HOM05D002352 ORTHO05D003724 1.2e-15 86.7 91 54.9
MSTRG.7313 Avicennia marina HOM05D002352 ORTHO05D003724 2.1e-15 85.9 84 60.7
MBI19_g16739_MAGBIO Magnolia biondii HOM05D002352 ORTHO05D003724 2.1e-15 85.9 99 54.5
Sed0013080 Sechium edule HOM05D002352 ORTHO05D003724 2.7e-15 85.5 63 69.8
Lj1C1209G5 Lonicera japonica HOM05D002352 ORTHO05D003724 3.6e-15 85.1 97 56.7
Lalb_Chr21g0313661 Lupinus albus HOM05D002352 ORTHO05D003724 3.6e-15 85.1 90 54.4
Migut.M01176 Erythranthe guttata HOM05D002352 ORTHO05D003724 4.7e-15 84.7 81 58.0
Zm00001eb149800 Zea mays HOM05D002352 ORTHO05D003724 4.7e-15 84.7 65 70.8
SalBow8G3229 Salvia bowleyana HOM05D002352 ORTHO05D003724 6.1e-15 84.3 84 59.5
Os01g0816400 Oryza sativa ssp. japonica HOM05D002352 ORTHO05D003724 8.0e-15 84.0 69 66.7
CDE05G3196 Ceratophyllum demersum HOM05D002352 ORTHO05D003724 1.8e-14 82.8 65 66.2
Nn1g03998 Nelumbo nucifera HOM05D002352 ORTHO05D003724 2.3e-14 82.4 104 51.9
unitig_37.g12343 Utricularia gibba HOM05D002352 ORTHO05D003724 3.9e-14 81.6 63 65.1
unitig_46.g18629 Utricularia gibba HOM05D002352 ORTHO05D003724 5.2e-14 81.3 63 68.3
CDE05G2722 Ceratophyllum demersum HOM05D002352 ORTHO05D003724 6.7e-14 80.9 65 64.6
SGA_v2.0_scaffold22G09771 Striga asiatica HOM05D002352 ORTHO05D003724 6.7e-14 80.9 85 57.6
HPP92_018014 Vanilla planifolia HOM05D002352 ORTHO05D003724 6.7e-14 80.9 65 66.2
SEGI_16535 Sequoiadendron giganteum HOM05D002352 ORTHO05D003724 8.8e-14 80.5 64 67.2
Zm00001eb369050 Zea mays HOM05D002352 ORTHO05D003724 1.5e-13 79.7 65 66.2
CARHR129850 Cardamine hirsuta HOM05D002352 ORTHO05D003724 2.0e-13 79.3 69 59.4
SGA_v2.0_scaffold100G29641 Striga asiatica HOM05D002352 ORTHO05D003724 2.0e-13 79.3 85 55.3
HPP92_026673 Vanilla planifolia HOM05D002352 ORTHO05D003724 2.0e-13 79.3 65 64.6
Lsat_1_v5_gn_7_19361 Lactuca sativa HOM05D002352 ORTHO05D003724 3.3e-13 78.6 73 61.6
AT2G35630 Arabidopsis thaliana HOM05D002352 ORTHO05D003724 7.4e-13 77.4 69 58.0
Carub.0004s1734 Capsella rubella HOM05D002352 ORTHO05D003724 7.4e-13 77.4 69 58.0
MBI19_g04166_MAGBIO Magnolia biondii HOM05D002352 ORTHO05D003724 7.4e-13 77.4 84 54.8
THA.LOC104798541 Tarenaya hassleriana HOM05D002352 ORTHO05D003724 7.4e-13 77.4 62 61.3
AL4G31700 Arabidopsis lyrata HOM05D002352 ORTHO05D003724 1.3e-12 76.6 69 58.0
BcaB01g03895 Brassica carinata HOM05D002352 ORTHO05D003724 2.2e-12 75.9 56 66.1
C04p12410 Brassica napus HOM05D002352 ORTHO05D003724 2.2e-12 75.9 56 66.1
BcaC02g11684 Brassica carinata HOM05D002352 ORTHO05D003724 2.8e-12 75.5 56 66.1
A03p19610 Brassica napus HOM05D002352 ORTHO05D003724 2.8e-12 75.5 56 66.1
C03p22870 Brassica napus HOM05D002352 ORTHO05D003724 2.8e-12 75.5 56 66.1
BolC3t14686H Brassica oleracea HOM05D002352 ORTHO05D003724 2.8e-12 75.5 56 66.1
BolC4t22889H Brassica oleracea HOM05D002352 ORTHO05D003724 2.8e-12 75.5 56 66.1
BraA03t11214Z Brassica rapa HOM05D002352 ORTHO05D003724 2.8e-12 75.5 56 66.1
Aa31LG9G15920 Aethionema arabicum HOM05D002352 ORTHO05D003724 4.8e-12 74.7 56 66.1
BcaB02g09406 Brassica carinata HOM05D002352 ORTHO05D003724 4.8e-12 74.7 56 66.1
A05p10050 Brassica napus HOM05D002352 ORTHO05D003724 4.8e-12 74.7 56 66.1
BraA05t19946Z Brassica rapa HOM05D002352 ORTHO05D003724 4.8e-12 74.7 56 66.1
Thhalv10016124m.g Eutrema salsugineum HOM05D002352 ORTHO05D003724 4.8e-12 74.7 56 66.1
Sp4g17870 Schrenkiella parvula HOM05D002352 ORTHO05D003724 9.1e-11 70.5 56 64.3
SMO230G0112 Selaginella moellendorffii HOM05D002352 ORTHO05D003724 2.6e-10 68.9 62 61.3
Mapoly0009s0135 Marchantia polymorpha HOM05D002352 ORTHO05D003724 3.8e-09 65.1 72 54.2
AagrBONN_evm.TU.Sc2ySwM_228.3370 Anthoceros agrestis HOM05D002352 ORTHO05D003724 1.5e-08 63.2 62 59.7
Pp3c9_24390 Physcomitrium patens HOM05D002352 ORTHO05D003724 1.5e-08 63.2 48 66.7
Pp3c15_23870 Physcomitrium patens HOM05D002352 ORTHO05D003724 1.9e-08 62.8 48 66.7


User provided reference genes

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