Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0757G031 Amborella trichopoda HOM05D005292 ORTHO05D006473 1.8e-213 745.7 405 100.0
GSVIVG01004916001 Vitis vinifera HOM05D005292 ORTHO05D006473 2.2e-134 483.0 266 85.0
QL12p014915 Quercus lobata HOM05D005292 ORTHO05D006473 4.9e-134 481.9 281 80.4
Cfa012803 Carpinus fangiana HOM05D005292 ORTHO05D006473 6.4e-134 481.5 266 84.6
CiPaw.11G147800 Carya illinoinensis HOM05D005292 ORTHO05D006473 6.4e-134 481.5 266 84.2
Cpa.g.sc29.95 Carica papaya HOM05D005292 ORTHO05D006473 5.4e-133 478.4 281 80.1
Ciclev10020454m.g Citrus clementina HOM05D005292 ORTHO05D006473 5.4e-133 478.4 266 83.5
Prupe.5G079200 Prunus persica HOM05D005292 ORTHO05D006473 5.4e-133 478.4 281 80.4
Thecc.03G261400 Theobroma cacao HOM05D005292 ORTHO05D006473 7.1e-133 478.0 266 84.2
CiPaw.12G105300 Carya illinoinensis HOM05D005292 ORTHO05D006473 9.3e-133 477.6 281 80.1
Atru.chr9.1428 Acer truncatum HOM05D005292 ORTHO05D006473 1.2e-132 477.2 274 82.1
Manes.02G033900 Manihot esculenta HOM05D005292 ORTHO05D006473 1.2e-132 477.2 281 79.7
FAN08G1347 Fragaria x ananassa HOM05D005292 ORTHO05D006473 1.6e-132 476.9 280 80.4
FAN18G3339 Fragaria x ananassa HOM05D005292 ORTHO05D006473 1.6e-132 476.9 280 80.4
Glyma.05G052500 Glycine max HOM05D005292 ORTHO05D006473 2.1e-132 476.5 266 84.6
VMungo1215G1740 Vigna mungo HOM05D005292 ORTHO05D006473 3.5e-132 475.7 266 84.2
Glyma.17G134700 Glycine max HOM05D005292 ORTHO05D006473 4.6e-132 475.3 266 84.6
PGR031G2306 Punica granatum HOM05D005292 ORTHO05D006473 4.6e-132 475.3 259 84.9
TWI15G0139 Tripterygium wilfordii HOM05D005292 ORTHO05D006473 4.6e-132 475.3 281 79.4
FAN04G0899 Fragaria x ananassa HOM05D005292 ORTHO05D006473 7.8e-132 474.6 280 80.0
FAN13G3324 Fragaria x ananassa HOM05D005292 ORTHO05D006473 7.8e-132 474.6 280 80.4
Sc22g0000600 Simmondsia chinensis HOM05D005292 ORTHO05D006473 1.0e-131 474.2 281 78.6
Medtr4g102260 Medicago truncatula HOM05D005292 ORTHO05D006473 1.7e-131 473.4 266 84.2
Potri.001G118000 Populus trichocarpa HOM05D005292 ORTHO05D006473 1.7e-131 473.4 281 79.0
COL.COLO4_31983 Corchorus olitorius HOM05D005292 ORTHO05D006473 2.3e-131 473.0 266 83.5
Eucgr.D01991 Eucalyptus grandis HOM05D005292 ORTHO05D006473 2.3e-131 473.0 265 83.8
Hma1.2p1_0367F.1_g137040 Hydrangea macrophylla HOM05D005292 ORTHO05D006473 2.3e-131 473.0 281 78.3
Duzib084G0213 Durio zibethinus HOM05D005292 ORTHO05D006473 3.0e-131 472.6 266 83.1
Nn1g01261 Nelumbo nucifera HOM05D005292 ORTHO05D006473 3.0e-131 472.6 266 82.7
THA.LOC104813867 Tarenaya hassleriana HOM05D005292 ORTHO05D006473 3.0e-131 472.6 282 78.7
CSS0004035 Camellia sinensis var. sinensis HOM05D005292 ORTHO05D006473 3.9e-131 472.2 281 79.0
Ca_12278_v3 Cicer arietinum L. HOM05D005292 ORTHO05D006473 3.9e-131 472.2 266 83.5
Phvul.003G214500 Phaseolus vulgaris HOM05D005292 ORTHO05D006473 3.9e-131 472.2 266 83.8
Dinv21573 Davidia involucrata HOM05D005292 ORTHO05D006473 5.1e-131 471.9 277 80.1
TPR.G37684 Trifolium pratense HOM05D005292 ORTHO05D006473 5.1e-131 471.9 266 83.1
CANSAT80G2034 Cannabis sativa HOM05D005292 ORTHO05D006473 6.6e-131 471.5 358 67.0
MD04G1079900 Malus domestica HOM05D005292 ORTHO05D006473 6.6e-131 471.5 281 78.6
PSO478G4449 Papaver somniferum HOM05D005292 ORTHO05D006473 6.6e-131 471.5 266 83.1
vmacro14043 Vaccinium macrocarpon HOM05D005292 ORTHO05D006473 6.6e-131 471.5 280 80.4
RcHm_v2.0_Chr7g0201621 Rosa chinensis HOM05D005292 ORTHO05D006473 1.9e-130 469.9 281 79.0
Lj4g0005126 Lotus japonicus HOM05D005292 ORTHO05D006473 2.5e-130 469.5 266 82.7
Oeu016513.1 Olea europaea HOM05D005292 ORTHO05D006473 3.3e-130 469.2 266 83.5
Psat4g068120 Pisum sativum HOM05D005292 ORTHO05D006473 4.3e-130 468.8 266 83.1
Migut.A00832 Erythranthe guttata HOM05D005292 ORTHO05D006473 7.3e-130 468.0 280 79.3
MBI12_g31646_MAGBIO Magnolia biondii HOM05D005292 ORTHO05D006473 7.3e-130 468.0 267 85.0
Cc08_g13210 Coffea canephora HOM05D005292 ORTHO05D006473 1.3e-129 467.2 281 78.6
Lj8A255T56 Lonicera japonica HOM05D005292 ORTHO05D006473 1.3e-129 467.2 281 77.6
PSO782G2032 Papaver somniferum HOM05D005292 ORTHO05D006473 1.3e-129 467.2 266 82.3
TAR636G1323 Trochodendron aralioides HOM05D005292 ORTHO05D006473 1.3e-129 467.2 267 83.5
Os10g0169800 Oryza sativa ssp. japonica HOM05D005292 ORTHO05D006473 1.6e-129 466.8 282 76.6
Potri.003G114900 Populus trichocarpa HOM05D005292 ORTHO05D006473 2.1e-129 466.5 266 81.2
Actinidia02093 Actinidia chinensis HOM05D005292 ORTHO05D006473 2.8e-129 466.1 276 79.3
arahy.Tifrunner.gnm1.ann1.VS5X7Y Arachis hypogaea HOM05D005292 ORTHO05D006473 8.1e-129 464.5 270 83.0
arahy.Tifrunner.gnm1.ann1.YRMJ3W Arachis hypogaea HOM05D005292 ORTHO05D006473 8.1e-129 464.5 270 83.0
CsaV3_5G003780 Cucumis sativus L. HOM05D005292 ORTHO05D006473 1.1e-128 464.2 278 78.8
Gohir.A11G020400 Gossypium hirsutum HOM05D005292 ORTHO05D006473 1.8e-128 463.4 281 78.3
Gohir.D12G223000 Gossypium hirsutum HOM05D005292 ORTHO05D006473 3.1e-128 462.6 266 80.8
ECA233G3282 Erigeron canadensis HOM05D005292 ORTHO05D006473 5.3e-128 461.8 281 77.2
AL6G47090 Arabidopsis lyrata HOM05D005292 ORTHO05D006473 9.0e-128 461.1 280 76.8
Gorai.007G021400 Gossypium raimondii HOM05D005292 ORTHO05D006473 9.0e-128 461.1 282 78.0
BcaB01g02654 Brassica carinata HOM05D005292 ORTHO05D006473 2.6e-127 459.5 276 77.9
Lalb_Chr05g0225431 Lupinus albus HOM05D005292 ORTHO05D006473 3.4e-127 459.1 266 81.2
Sed0004099 Sechium edule HOM05D005292 ORTHO05D006473 3.4e-127 459.1 280 77.1
SalBow1G6483 Salvia bowleyana HOM05D005292 ORTHO05D006473 4.5e-127 458.8 266 80.5
CAN.G630.87 Capsicum annuum HOM05D005292 ORTHO05D006473 5.8e-127 458.4 281 77.2
AUR62010507 Chenopodium quinoa HOM05D005292 ORTHO05D006473 9.9e-127 457.6 274 76.3
Thhalv10028717m.g Eutrema salsugineum HOM05D005292 ORTHO05D006473 9.9e-127 457.6 282 76.6
Gohir.A03G012000 Gossypium hirsutum HOM05D005292 ORTHO05D006473 9.9e-127 457.6 266 81.6
Gohir.D03G157800 Gossypium hirsutum HOM05D005292 ORTHO05D006473 9.9e-127 457.6 266 81.6
AT4G12230 Arabidopsis thaliana HOM05D005292 ORTHO05D006473 1.3e-126 457.2 280 76.1
EL10Ac5g12610 Beta vulgaris HOM05D005292 ORTHO05D006473 1.7e-126 456.8 274 75.9
CDE11G0205 Ceratophyllum demersum HOM05D005292 ORTHO05D006473 1.7e-126 456.8 268 80.6
Sp6g05330 Schrenkiella parvula HOM05D005292 ORTHO05D006473 1.7e-126 456.8 282 77.0
Hund14648 Selenicereus undatus HOM05D005292 ORTHO05D006473 1.7e-126 456.8 274 77.7
Aqoxy7G00654 Aquilegia oxysepala HOM05D005292 ORTHO05D006473 2.9e-126 456.1 261 81.2
CARHR254020 Cardamine hirsuta HOM05D005292 ORTHO05D006473 2.9e-126 456.1 282 76.2
Ah.12g058260 Amaranthus hybridus HOM05D005292 ORTHO05D006473 3.8e-126 455.7 265 78.5
BcaC01g04601 Brassica carinata HOM05D005292 ORTHO05D006473 3.8e-126 455.7 261 80.8
Gorai.003G166300 Gossypium raimondii HOM05D005292 ORTHO05D006473 3.8e-126 455.7 265 81.9
CDE09G1063 Ceratophyllum demersum HOM05D005292 ORTHO05D006473 4.9e-126 455.3 257 81.7
AUR62017394 Chenopodium quinoa HOM05D005292 ORTHO05D006473 4.9e-126 455.3 260 79.2
Zm00001eb026990 Zea mays HOM05D005292 ORTHO05D006473 4.9e-126 455.3 282 75.5
A03p29600 Brassica napus HOM05D005292 ORTHO05D006473 6.4e-126 454.9 276 77.5
BraA03t12155Z Brassica rapa HOM05D005292 ORTHO05D006473 6.4e-126 454.9 276 77.5
PGSC0003DMG400003959 Solanum tuberosum HOM05D005292 ORTHO05D006473 8.4e-126 454.5 281 76.2
Carub.0006s3135 Capsella rubella HOM05D005292 ORTHO05D006473 1.1e-125 454.1 282 75.9
Sopen08g027820 Solanum pennellii HOM05D005292 ORTHO05D006473 1.4e-125 453.8 281 75.8
Gohir.D11G020100 Gossypium hirsutum HOM05D005292 ORTHO05D006473 1.9e-125 453.4 281 76.5
Nitab4.5_0007591g0040 Nicotiana tabacum HOM05D005292 ORTHO05D006473 3.2e-125 452.6 281 75.8
Aa31LG9G10310 Aethionema arabicum HOM05D005292 ORTHO05D006473 4.2e-125 452.2 262 79.8
MSTRG.12063 Avicennia marina HOM05D005292 ORTHO05D006473 4.2e-125 452.2 346 64.7
HanXRQChr02g0046251 Helianthus annuus HOM05D005292 ORTHO05D006473 5.4e-125 451.8 275 76.7
Peaxi162Scf00271g00021 Petunia axillaris HOM05D005292 ORTHO05D006473 5.4e-125 451.8 358 63.7
C03p35880 Brassica napus HOM05D005292 ORTHO05D006473 9.3e-125 451.1 262 80.5
BolC3t15896H Brassica oleracea HOM05D005292 ORTHO05D006473 9.3e-125 451.1 262 80.5
Solyc08g079450.3 Solanum lycopersicum HOM05D005292 ORTHO05D006473 9.3e-125 451.1 281 75.4
Nitab4.5_0003534g0020 Nicotiana tabacum HOM05D005292 ORTHO05D006473 1.2e-124 450.7 357 66.7
Gorai.008G239300 Gossypium raimondii HOM05D005292 ORTHO05D006473 1.6e-124 450.3 291 73.9
SGA_v2.0_scaffold120G32820 Striga asiatica HOM05D005292 ORTHO05D006473 2.1e-124 449.9 310 72.6
HPP92_014608 Vanilla planifolia HOM05D005292 ORTHO05D006473 2.7e-124 449.5 267 79.4
Gohir.A12G220700 Gossypium hirsutum HOM05D005292 ORTHO05D006473 1.8e-123 446.8 265 78.9
HanXRQChr07g0188671 Helianthus annuus HOM05D005292 ORTHO05D006473 3.0e-123 446.0 279 75.3
DCAR_006803 Daucus carota HOM05D005292 ORTHO05D006473 3.9e-123 445.7 281 75.4
Haze_08610 Corylus avellana HOM05D005292 ORTHO05D006473 3.1e-120 436.0 350 64.3
Ah.02g116220 Amaranthus hybridus HOM05D005292 ORTHO05D006473 6.4e-118 428.3 241 80.9
Lsat_1_v5_gn_6_9841 Lactuca sativa HOM05D005292 ORTHO05D006473 1.2e-116 424.1 256 78.5
ClCG01G003660 Citrullus lanatus HOM05D005292 ORTHO05D006473 2.7e-116 422.9 288 72.2
Sabra01G0090700 Salix brachista HOM05D005292 ORTHO05D006473 2.7e-116 422.9 377 58.4
unitig_744.g24320 Utricularia gibba HOM05D005292 ORTHO05D006473 4.3e-114 415.6 291 67.7
Dinv39082 Davidia involucrata HOM05D005292 ORTHO05D006473 5.6e-114 415.2 402 56.2
Pp3c6_20320 Physcomitrium patens HOM05D005292 ORTHO05D006473 3.7e-113 412.5 256 74.6
Nn4g26373 Nelumbo nucifera HOM05D005292 ORTHO05D006473 6.2e-113 411.8 266 74.1
SEGI_16146 Sequoiadendron giganteum HOM05D005292 ORTHO05D006473 2.9e-110 402.9 259 72.6
FvH4_5g00640 Fragaria vesca HOM05D005292 ORTHO05D006473 2.5e-109 399.8 225 83.6
SMO223G0031 Selaginella moellendorffii HOM05D005292 ORTHO05D006473 4.6e-108 395.6 255 70.6
TWI15G0397 Tripterygium wilfordii HOM05D005292 ORTHO05D006473 7.9e-108 394.8 281 69.8
Mapoly0066s0051 Marchantia polymorpha HOM05D005292 ORTHO05D006473 5.7e-106 388.7 263 70.7
AagrBONN_evm.TU.Sc2ySwM_368.248 Anthoceros agrestis HOM05D005292 ORTHO05D006473 5.9e-103 378.6 252 71.0
Rhsim07G0101700 Rhododendron simsii HOM05D005292 ORTHO05D006473 3.9e-99 365.9 280 65.0
Sabra03G0079600 Salix brachista HOM05D005292 ORTHO05D006473 4.2e-93 345.9 195 82.1
Duzib205G1434 Durio zibethinus HOM05D005292 ORTHO05D006473 1.5e-87 327.4 202 78.7
TAR629G1108 Trochodendron aralioides HOM05D005292 ORTHO05D006473 2.4e-80 303.5 159 86.8
Oeu022319.3 Olea europaea HOM05D005292 ORTHO05D006473 6.5e-78 295.4 224 67.0
Actinidia14462 Actinidia chinensis HOM05D005292 ORTHO05D006473 7.5e-74 282.0 280 52.9
Dinv37766 Davidia involucrata HOM05D005292 ORTHO05D006473 1.6e-63 247.7 145 81.4
Aa31LG11G5120 Aethionema arabicum HOM05D005292 ORTHO05D006473 9.8e-58 228.4 146 71.2
MD06G1074900 Malus domestica HOM05D005292 ORTHO05D006473 1.2e-55 221.5 138 71.7
Lsat_1_v5_gn_8_156781 Lactuca sativa HOM05D005292 ORTHO05D006473 5.6e-45 186.0 173 58.4
Lsat_1_v5_gn_2_99060 Lactuca sativa HOM05D005292 ORTHO05D006473 1.2e-39 168.3 120 71.7
MELO3C005579.2 Cucumis melo HOM05D005292 ORTHO05D006473 3.5e-39 166.8 105 77.1
Lsat_1_v5_gn_8_99640 Lactuca sativa HOM05D005292 ORTHO05D006473 9.9e-34 148.7 161 50.9
SEGI_08273 Sequoiadendron giganteum HOM05D005292 ORTHO05D006473 2.9e-33 147.1 84 83.3
Lsat_1_v5_gn_8_88300 Lactuca sativa HOM05D005292 ORTHO05D006473 1.1e-29 135.2 145 49.0
SEGI_25328 Sequoiadendron giganteum HOM05D005292 ORTHO05D006473 1.9e-29 134.4 79 70.9
TAR636G3691 Trochodendron aralioides HOM05D005292 ORTHO05D006473 3.1e-27 127.1 74 81.1
MD06G1074800 Malus domestica HOM05D005292 ORTHO05D006473 6.4e-25 119.4 72 80.6
SEGI_15988 Sequoiadendron giganteum HOM05D005292 ORTHO05D006473 6.4e-25 119.4 66 81.8
Glyma.05G052200 Glycine max HOM05D005292 ORTHO05D006473 9.2e-24 115.5 83 67.5
TWI81G0363 Tripterygium wilfordii HOM05D005292 ORTHO05D006473 8.1e-20 102.4 71 70.4
CDE11G1060 Ceratophyllum demersum HOM05D005292 ORTHO05D006473 4.6e-15 86.7 57 68.4
Eucgr.C02046 Eucalyptus grandis HOM05D005292 ORTHO05D006473 7.8e-15 85.9 66 63.6
vmacro17465 Vaccinium macrocarpon HOM05D002883 ORTHO05D003116 1.0e-14 85.5 72 58.3
Cc08_g13200 Coffea canephora HOM05D005292 ORTHO05D006473 8.7e-14 82.4 57 64.9
Peaxi162Scf00102g01237 Petunia axillaris HOM05D000023 ORTHO05D013611 3.0e-06 57.4 41 58.5


User provided reference genes

Program Settings