Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0753G159 Amborella trichopoda HOM05D006956 ORTHO05D008824 2.7e-55 218.4 108 100.0
Prupe.4G141800 Prunus persica HOM05D006956 ORTHO05D008824 6.1e-23 110.9 83 67.5
QL04p076576 Quercus lobata HOM05D006956 ORTHO05D008824 7.9e-23 110.5 79 72.2
Nn7g38051 Nelumbo nucifera HOM05D006956 ORTHO05D008824 2.3e-22 109.0 87 63.2
Aqoxy1G01495 Aquilegia oxysepala HOM05D006956 ORTHO05D008824 3.0e-22 108.6 86 62.8
GSVIVG01020406001 Vitis vinifera HOM05D006956 ORTHO05D008824 3.0e-22 108.6 80 68.8
Phvul.005G057800 Phaseolus vulgaris HOM05D006956 ORTHO05D008824 3.9e-22 108.2 80 65.0
CSS0000379 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 5.1e-22 107.8 81 67.9
CSS0020916 Camellia sinensis var. sinensis HOM05D006956 ORTHO05D008824 5.1e-22 107.8 81 67.9
CAN.G710.39 Capsicum annuum HOM05D006956 ORTHO05D008824 5.1e-22 107.8 92 59.8
TWI39G0297 Tripterygium wilfordii HOM05D006956 ORTHO05D008824 5.1e-22 107.8 80 66.2
Gorai.007G335600 Gossypium raimondii HOM05D006956 ORTHO05D008824 1.1e-21 106.7 82 64.6
Solyc09g098220.3 Solanum lycopersicum HOM05D006956 ORTHO05D008824 1.1e-21 106.7 88 62.5
Sopen09g036160 Solanum pennellii HOM05D006956 ORTHO05D008824 1.1e-21 106.7 88 62.5
Thecc.07G151600 Theobroma cacao HOM05D006956 ORTHO05D008824 1.1e-21 106.7 80 66.2
TAR362G0399 Trochodendron aralioides HOM05D006956 ORTHO05D008824 1.1e-21 106.7 87 62.1
Potri.001G439000 Populus trichocarpa HOM05D006956 ORTHO05D008824 1.5e-21 106.3 82 65.9
RcHm_v2.0_Chr5g0026331 Rosa chinensis HOM05D006956 ORTHO05D008824 2.0e-21 105.9 80 63.8
Dinv19614 Davidia involucrata HOM05D006956 ORTHO05D008824 2.6e-21 105.5 80 63.8
Manes.06G172400 Manihot esculenta HOM05D006956 ORTHO05D008824 2.6e-21 105.5 75 70.7
Peaxi162Scf00286g00448 Petunia axillaris HOM05D006956 ORTHO05D008824 3.3e-21 105.1 88 61.4
Ca_03670_v3 Cicer arietinum L. HOM05D006956 ORTHO05D008824 4.4e-21 104.8 86 59.3
COL.COLO4_07377 Corchorus olitorius HOM05D006956 ORTHO05D008824 4.4e-21 104.8 86 61.6
Gohir.A11G291500 Gossypium hirsutum HOM05D006956 ORTHO05D008824 4.4e-21 104.8 76 69.7
MD10G1203100 Malus domestica HOM05D006956 ORTHO05D008824 4.4e-21 104.8 74 70.3
Prupe.4G139000 Prunus persica HOM05D006956 ORTHO05D008824 4.4e-21 104.8 73 68.5
CiPaw.11G066300 Carya illinoinensis HOM05D006956 ORTHO05D008824 5.7e-21 104.4 80 63.8
FvH4_3g15651 Fragaria vesca HOM05D006956 ORTHO05D008824 7.4e-21 104.0 80 63.8
C08p44410 Brassica napus HOM05D006956 ORTHO05D008824 9.7e-21 103.6 89 61.8
Ciclev10022296m.g Citrus clementina HOM05D006956 ORTHO05D008824 9.7e-21 103.6 89 60.7
Zm00001eb198240 Zea mays HOM05D006956 ORTHO05D008824 9.7e-21 103.6 85 58.8
Haze_03154 Corylus avellana HOM05D006956 ORTHO05D008824 1.3e-20 103.2 83 62.7
HPP92_011671 Vanilla planifolia HOM05D006956 ORTHO05D008824 1.3e-20 103.2 82 59.8
Atru.chr9.1519 Acer truncatum HOM05D006956 ORTHO05D008824 1.7e-20 102.8 74 68.9
BraA09t41455Z Brassica rapa HOM05D006956 ORTHO05D008824 1.7e-20 102.8 87 59.8
THA.LOC104808124 Tarenaya hassleriana HOM05D006956 ORTHO05D008824 1.7e-20 102.8 82 56.1
VMungo1080G0523 Vigna mungo HOM05D006956 ORTHO05D008824 1.7e-20 102.8 80 61.2
FAN21G1707 Fragaria x ananassa HOM05D006956 ORTHO05D008824 2.2e-20 102.4 76 65.8
Cc05_g16140 Coffea canephora HOM05D006956 ORTHO05D008824 3.7e-20 101.7 76 64.5
Eucgr.A00498 Eucalyptus grandis HOM05D006956 ORTHO05D008824 3.7e-20 101.7 80 61.2
Lj3g0018815 Lotus japonicus HOM05D006956 ORTHO05D008824 3.7e-20 101.7 90 57.8
Medtr2g069340 Medicago truncatula HOM05D006956 ORTHO05D008824 3.7e-20 101.7 80 63.8
TPR.G9744 Trifolium pratense HOM05D006956 ORTHO05D008824 3.7e-20 101.7 87 62.1
Hma1.2p1_0334F.1_g128720 Hydrangea macrophylla HOM05D006956 ORTHO05D008824 4.8e-20 101.3 80 61.2
RcHm_v2.0_Chr5g0026311 Rosa chinensis HOM05D006956 ORTHO05D008824 4.8e-20 101.3 72 68.1
MSTRG.13068 Avicennia marina HOM05D006956 ORTHO05D008824 6.3e-20 100.9 83 60.2
FAN25G3578 Fragaria x ananassa HOM05D006956 ORTHO05D008824 6.3e-20 100.9 76 64.5
Psat1g012040 Pisum sativum HOM05D006956 ORTHO05D008824 6.3e-20 100.9 74 67.6
A09p60820 Brassica napus HOM05D006956 ORTHO05D008824 8.2e-20 100.5 87 58.6
BolC8t51982H Brassica oleracea HOM05D006956 ORTHO05D008824 8.2e-20 100.5 82 62.2
Migut.H01688 Erythranthe guttata HOM05D006956 ORTHO05D008824 8.2e-20 100.5 83 63.9
Lj3g0016125 Lotus japonicus HOM05D006956 ORTHO05D008824 8.2e-20 100.5 90 57.8
Lalb_Chr20g0108711 Lupinus albus HOM05D006956 ORTHO05D008824 8.2e-20 100.5 80 60.0
AT1G16590 Arabidopsis thaliana HOM05D006956 ORTHO05D008824 1.1e-19 100.1 103 49.5
Glyma.15G256600 Glycine max HOM05D006956 ORTHO05D008824 1.1e-19 100.1 80 62.5
FAN16G1261 Fragaria x ananassa HOM05D006956 ORTHO05D008824 1.4e-19 99.8 72 66.7
arahy.Tifrunner.gnm1.ann1.JC2BA5 Arachis hypogaea HOM05D006956 ORTHO05D008824 1.8e-19 99.4 78 61.5
Cfa010806 Carpinus fangiana HOM05D006956 ORTHO05D008824 1.8e-19 99.4 73 65.8
SalBow5G4858 Salvia bowleyana HOM05D006956 ORTHO05D008824 1.8e-19 99.4 83 59.0
Sed0013658 Sechium edule HOM05D006956 ORTHO05D008824 1.8e-19 99.4 93 54.8
arahy.Tifrunner.gnm1.ann1.82TPB7 Arachis hypogaea HOM05D006956 ORTHO05D008824 2.4e-19 99.0 70 67.1
MELO3C019670.2 Cucumis melo HOM05D006956 ORTHO05D008824 2.4e-19 99.0 74 64.9
Sabra16G0296900 Salix brachista HOM05D006956 ORTHO05D008824 2.4e-19 99.0 83 62.7
Lju41A37T48 Lonicera japonica HOM05D006956 ORTHO05D008824 4.1e-19 98.2 68 67.6
Nitab4.5_0001526g0100 Nicotiana tabacum HOM05D006956 ORTHO05D008824 4.1e-19 98.2 79 62.0
MBI18_g44288_MAGBIO Magnolia biondii HOM05D006956 ORTHO05D008824 5.3e-19 97.8 61 77.0
PGR142G1185 Punica granatum HOM05D006956 ORTHO05D008824 5.3e-19 97.8 78 60.3
AL1G28750 Arabidopsis lyrata HOM05D006956 ORTHO05D008824 9.1e-19 97.1 79 57.0
CsaV3_6G013760 Cucumis sativus L. HOM05D006956 ORTHO05D008824 9.1e-19 97.1 74 63.5
CANSAT54G1214 Cannabis sativa HOM05D006956 ORTHO05D008824 2.0e-18 95.9 84 56.0
Rhsim04G0005600 Rhododendron simsii HOM05D006956 ORTHO05D008824 2.0e-18 95.9 81 60.5
Cfa010808 Carpinus fangiana HOM05D006956 ORTHO05D008824 2.6e-18 95.5 74 63.5
Thhalv10008810m.g Eutrema salsugineum HOM05D006956 ORTHO05D008824 2.6e-18 95.5 80 61.2
CARHR017060 Cardamine hirsuta HOM05D006956 ORTHO05D008824 3.4e-18 95.1 76 59.2
FAN11G3326 Fragaria x ananassa HOM05D006956 ORTHO05D008824 1.3e-17 93.2 97 52.6
vmacro00957 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 1.7e-17 92.8 87 55.2
CDE05G1956 Ceratophyllum demersum HOM05D003342 ORTHO05D003861 2.9e-17 92.0 90 53.3
PSO210G3417 Papaver somniferum HOM05D006956 ORTHO05D008824 2.9e-17 92.0 75 58.7
PSO223G0077 Papaver somniferum HOM05D006956 ORTHO05D008824 6.5e-17 90.9 82 52.4
MD17G1180100 Malus domestica HOM05D006956 ORTHO05D008824 8.5e-17 90.5 54 79.6
ClCG02G018480 Citrullus lanatus HOM05D006956 ORTHO05D008824 1.4e-16 89.7 93 52.7
AUR62026907 Chenopodium quinoa HOM05D006956 ORTHO05D008824 1.9e-16 89.4 64 62.5
Actinidia35432 Actinidia chinensis HOM05D006956 ORTHO05D008824 9.4e-16 87.0 89 53.9
AUR62042418 Chenopodium quinoa HOM05D006956 ORTHO05D008824 1.6e-15 86.3 71 56.3
SGA_v2.0_scaffold49G18176 Striga asiatica HOM05D006956 ORTHO05D008824 1.0e-14 83.6 78 56.4
Pp3c4_6830 Physcomitrium patens HOM05D006956 ORTHO05D008824 1.4e-14 83.2 89 46.1
Carub.0001s1634 Capsella rubella HOM05D006956 ORTHO05D008824 2.3e-14 82.4 83 50.6
Pp3c4_6840 Physcomitrium patens HOM05D006956 ORTHO05D008824 1.1e-13 80.1 84 46.4
HanXRQChr08g0231891 Helianthus annuus HOM05D006956 ORTHO05D008824 1.5e-13 79.7 80 43.8
Mapoly0023s0023 Marchantia polymorpha HOM05D006956 ORTHO05D008824 2.0e-13 79.3 95 41.1
ECA247G3084 Erigeron canadensis HOM05D006956 ORTHO05D008824 3.3e-13 78.6 76 52.6
Aa31LG7G1120 Aethionema arabicum HOM05D006956 ORTHO05D008824 7.4e-13 77.4 81 50.6
vmacro22747 Vaccinium macrocarpon HOM05D006956 ORTHO05D008824 7.4e-13 77.4 57 61.4
AagrBONN_evm.TU.Sc2ySwM_368.712 Anthoceros agrestis HOM05D006956 ORTHO05D008824 1.7e-12 76.3 80 47.5
SMO340G0149 Selaginella moellendorffii HOM05D006956 ORTHO05D008824 3.5e-10 68.6 73 45.2
PGSC0003DMG400014067 Solanum tuberosum HOM05D006956 ORTHO05D008466 4.2e-08 61.6 51 56.9
Sp1g14740 Schrenkiella parvula HOM05D006956 ORTHO05D008824 5.5e-08 61.2 80 43.8
Cre13.g575333 Chlamydomonas reinhardtii HOM05D006956 ORTHO05D008824 8.0e-07 57.4 65 41.5


User provided reference genes

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