Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0753G112 Amborella trichopoda HOM05D003219 ORTHO05D026562 2.8e-39 164.9 86 100.0
ATR0564G130 Amborella trichopoda HOM05D003219 ORTHO05D005190 4.7e-34 147.5 85 89.4
ATR0753G017 Amborella trichopoda HOM05D003219 ORTHO05D005190 1.5e-32 142.5 85 88.2
ATR0753G038 Amborella trichopoda HOM05D003219 ORTHO05D026562 2.5e-27 125.2 85 76.5
Hund25208 Selenicereus undatus HOM05D003219 ORTHO05D005190 1.3e-07 59.7 85 43.5
Sed0027994 Sechium edule HOM05D003219 ORTHO05D005190 2.2e-07 58.9 85 42.4
ClCG01G022630 Citrullus lanatus HOM05D003219 ORTHO05D005190 2.8e-07 58.5 85 42.4
RcHm_v2.0_Chr7g0193971 Rosa chinensis HOM05D003219 ORTHO05D005190 2.8e-07 58.5 85 43.5
SHI02082 Sapria himalayana HOM05D003219 ORTHO05D005190 4.9e-07 57.8 79 49.4
arahy.Tifrunner.gnm1.ann1.AH329K Arachis hypogaea HOM05D003219 ORTHO05D005190 8.3e-07 57.0 65 50.8
COL.COLO4_31569 Corchorus olitorius HOM05D003219 ORTHO05D005190 8.3e-07 57.0 51 58.8
SEGI_12412 Sequoiadendron giganteum HOM05D003219 ORTHO05D005190 8.3e-07 57.0 60 53.3
SEGI_15939 Sequoiadendron giganteum HOM05D003219 ORTHO05D026562 8.3e-07 57.0 60 53.3
TPR.G36818 Trifolium pratense HOM05D003219 ORTHO05D005190 1.1e-06 56.6 47 61.7
TWI63G1169 Tripterygium wilfordii HOM05D003219 ORTHO05D005190 1.1e-06 56.6 51 60.8
Sc17g0006530 Simmondsia chinensis HOM05D003219 ORTHO05D005190 1.4e-06 56.2 85 42.4
RcHm_v2.0_Chr5g0006601 Rosa chinensis HOM05D003219 ORTHO05D005190 1.8e-06 55.8 49 63.3
MD10G1302200 Malus domestica HOM05D003219 ORTHO05D005190 2.4e-06 55.5 85 44.7
TPR.G16428 Trifolium pratense HOM05D003219 ORTHO05D005190 2.4e-06 55.5 49 59.2
Cfa000363 Carpinus fangiana HOM05D003219 ORTHO05D005190 3.1e-06 55.1 83 44.6
Haze_06562 Corylus avellana HOM05D003219 ORTHO05D005190 4.1e-06 54.7 83 44.6
MD05G1324400 Malus domestica HOM05D003219 ORTHO05D005190 4.1e-06 54.7 85 44.7
VMungo0540G2265 Vigna mungo HOM05D003219 ORTHO05D005190 4.1e-06 54.7 72 47.2
Ca_00267_v3 Cicer arietinum L. HOM05D003219 ORTHO05D005190 5.4e-06 54.3 44 61.4
MELO3C007313.2 Cucumis melo HOM05D003219 ORTHO05D005190 5.4e-06 54.3 40 65.0
CsaV3_6G049830 Cucumis sativus L. HOM05D003219 ORTHO05D005190 5.4e-06 54.3 40 65.0
Lj6g0004744 Lotus japonicus HOM05D003219 ORTHO05D005190 5.4e-06 54.3 40 65.0
Thecc.06G197600 Theobroma cacao HOM05D003219 ORTHO05D005190 5.4e-06 54.3 38 68.4
arahy.Tifrunner.gnm1.ann1.U3KJRG Arachis hypogaea HOM05D003219 ORTHO05D005190 7.0e-06 53.9 55 56.4
CANSAT78G1072 Cannabis sativa HOM05D003219 ORTHO05D005190 9.2e-06 53.5 38 68.4
Phvul.006G191500 Phaseolus vulgaris HOM05D003219 ORTHO05D005190 9.2e-06 53.5 72 47.2
TAR369G0028 Trochodendron aralioides HOM05D003219 ORTHO05D005190 9.2e-06 53.5 50 52.0


User provided reference genes

Program Settings