Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0753G105 Amborella trichopoda HOM05D006674 ORTHO05D007954 5.7e-135 484.2 233 100.0
VMungo1383G3322 Vigna mungo HOM05D006674 ORTHO05D007954 3.8e-46 189.1 253 42.7
GSVIVG01030703001 Vitis vinifera HOM05D006674 ORTHO05D007954 3.0e-43 179.5 137 62.0
CiPaw.03G073400 Carya illinoinensis HOM05D006674 ORTHO05D007954 5.7e-42 175.3 135 63.0
Dinv28183 Davidia involucrata HOM05D006674 ORTHO05D007954 5.3e-40 168.7 143 59.4
Nn4g24371 Nelumbo nucifera HOM05D006674 ORTHO05D007954 9.0e-40 167.9 131 61.8
ClCG05G010660 Citrullus lanatus HOM05D006674 ORTHO05D007954 1.2e-39 167.5 146 61.0
Mapoly0177s0018 Marchantia polymorpha HOM05D006674 ORTHO05D007954 2.2e-38 163.3 168 48.8
TPR.G24904 Trifolium pratense HOM05D006674 ORTHO05D007954 3.8e-38 162.5 129 60.5
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 5.0e-38 162.2 137 60.6
CBR_g12189 Chara braunii HOM05D000019 ORTHO05D000002 1.1e-37 161.0 122 59.0
Duzib133G1445 Durio zibethinus HOM05D006674 ORTHO05D007954 1.9e-37 160.2 131 57.3
QL02p059277 Quercus lobata HOM05D006674 ORTHO05D007954 2.5e-37 159.8 180 45.6
Aqoxy5G02269 Aquilegia oxysepala HOM05D006674 ORTHO05D007954 3.2e-37 159.5 133 58.6
TWI77G1007 Tripterygium wilfordii HOM05D006674 ORTHO05D007954 4.2e-37 159.1 130 59.2
Sc11g0004590 Simmondsia chinensis HOM05D006674 ORTHO05D007954 5.5e-37 158.7 129 59.7
Thecc.04G053800 Theobroma cacao HOM05D006674 ORTHO05D007954 5.5e-37 158.7 133 59.4
Actinidia28801 Actinidia chinensis HOM05D006674 ORTHO05D007954 7.2e-37 158.3 138 57.2
Gohir.D07G078400 Gossypium hirsutum HOM05D006674 ORTHO05D007954 9.3e-37 157.9 131 59.5
Gorai.001G082800 Gossypium raimondii HOM05D006674 ORTHO05D007954 9.3e-37 157.9 131 59.5
Zm00001eb221050 Zea mays HOM05D006674 ORTHO05D007954 2.1e-36 156.8 159 54.1
CSS0023224 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 4.6e-36 155.6 132 60.6
Potri.004G085200 Populus trichocarpa HOM05D006674 ORTHO05D007954 1.0e-35 154.5 134 53.0
CDE06G1904 Ceratophyllum demersum HOM05D006674 ORTHO05D007954 1.8e-35 153.7 120 65.8
Cc07_g13280 Coffea canephora HOM05D006674 ORTHO05D007954 2.3e-35 153.3 141 57.4
Atru.chr1.1984 Acer truncatum HOM05D006674 ORTHO05D007954 3.0e-35 152.9 132 57.6
Medtr3g065220 Medicago truncatula HOM05D006674 ORTHO05D007954 3.0e-35 152.9 130 53.8
Glyma.18G041200 Glycine max HOM05D006674 ORTHO05D007954 3.9e-35 152.5 129 59.7
Eucgr.F02873 Eucalyptus grandis HOM05D006674 ORTHO05D007954 5.1e-35 152.1 131 55.0
Ciclev10011395m.g Citrus clementina HOM05D006674 ORTHO05D007954 6.7e-35 151.8 131 59.5
Gohir.A07G073700 Gossypium hirsutum HOM05D006674 ORTHO05D007954 6.7e-35 151.8 132 56.1
THA.LOC104805245 Tarenaya hassleriana HOM05D006674 ORTHO05D007954 6.7e-35 151.8 130 57.7
Migut.H02229 Erythranthe guttata HOM05D006674 ORTHO05D007954 1.1e-34 151.0 134 54.5
Glyma.11G215400 Glycine max HOM05D006674 ORTHO05D007954 2.5e-34 149.8 120 61.7
PSO017G4728 Papaver somniferum HOM05D006674 ORTHO05D007954 2.5e-34 149.8 131 59.5
DCAR_016695 Daucus carota HOM05D006674 ORTHO05D007954 3.3e-34 149.4 121 60.3
Lj6g0000042 Lotus japonicus HOM05D006674 ORTHO05D007954 4.3e-34 149.1 119 60.5
PSO478G0741 Papaver somniferum HOM05D006674 ORTHO05D007954 1.7e-33 147.1 131 58.0
Phvul.001G229300 Phaseolus vulgaris HOM05D006674 ORTHO05D007954 1.7e-33 147.1 129 57.4
Psat5g120320 Pisum sativum HOM05D006674 ORTHO05D007954 1.7e-33 147.1 127 55.9
Lalb_Chr15g0084971 Lupinus albus HOM05D006674 ORTHO05D007954 1.1e-32 144.4 144 54.9
MD17G1268600 Malus domestica HOM05D006674 ORTHO05D007954 1.4e-32 144.1 161 49.7
CsaV3_3G017830 Cucumis sativus L. HOM05D006674 ORTHO05D007954 2.4e-32 143.3 122 60.7
AT5G37590 Arabidopsis thaliana HOM05D006674 ORTHO05D007954 5.3e-32 142.1 128 57.8
MELO3C031718.2 Cucumis melo HOM05D006674 ORTHO05D007954 6.9e-32 141.7 122 59.8
Sed0023155 Sechium edule HOM05D006674 ORTHO05D007954 6.9e-32 141.7 122 61.5
vmacro18526 Vaccinium macrocarpon HOM05D006674 ORTHO05D007954 9.1e-32 141.4 136 55.9
BcaB06g27104 Brassica carinata HOM05D006674 ORTHO05D007954 1.5e-31 140.6 133 59.4
Solyc11g011390.3 Solanum lycopersicum HOM05D006674 ORTHO05D007954 2.6e-31 139.8 120 59.2
Sp7g04510 Schrenkiella parvula HOM05D006674 ORTHO05D007954 3.4e-31 139.4 144 56.2
BcaC02g09589 Brassica carinata HOM05D006674 ORTHO05D007954 5.9e-31 138.7 132 56.8
C04p44470 Brassica napus HOM05D006674 ORTHO05D007954 5.9e-31 138.7 132 56.8
BolC4t26017H Brassica oleracea HOM05D006674 ORTHO05D007954 5.9e-31 138.7 132 56.8
Sabra04G0056300 Salix brachista HOM05D006674 ORTHO05D007954 7.7e-31 138.3 135 51.1
Carub.0007s3275 Capsella rubella HOM05D006674 ORTHO05D007954 1.3e-30 137.5 139 51.8
Thhalv10027712m.g Eutrema salsugineum HOM05D006674 ORTHO05D007954 2.2e-30 136.7 121 59.5
FAN26G0614 Fragaria x ananassa HOM05D006674 ORTHO05D007954 2.2e-30 136.7 147 53.1
Manes.01G119600 Manihot esculenta HOM05D006674 ORTHO05D007954 2.2e-30 136.7 122 56.6
AL7G46330 Arabidopsis lyrata HOM05D006674 ORTHO05D007954 2.9e-30 136.3 122 59.0
A04p10750 Brassica napus HOM05D006674 ORTHO05D007954 3.8e-30 136.0 132 57.6
BraA04t16739Z Brassica rapa HOM05D006674 ORTHO05D007954 3.8e-30 136.0 132 57.6
Aa31LG9G17490 Aethionema arabicum HOM05D006674 ORTHO05D007954 5.0e-30 135.6 128 55.5
PGR004G1202 Punica granatum HOM05D006674 ORTHO05D007954 1.1e-29 134.4 185 42.2
arahy.Tifrunner.gnm1.ann1.M54V7M Arachis hypogaea HOM05D006674 ORTHO05D007954 2.5e-29 133.3 141 50.4
FvH4_1g30190 Fragaria vesca HOM05D006674 ORTHO05D007954 2.5e-29 133.3 125 57.6
RcHm_v2.0_Chr3g0491391 Rosa chinensis HOM05D006674 ORTHO05D007954 2.5e-29 133.3 129 56.6
EL10Ac2g03314 Beta vulgaris HOM05D006674 ORTHO05D007954 4.2e-29 132.5 122 55.7
HanXRQChr09g0259811 Helianthus annuus HOM05D006674 ORTHO05D007954 5.5e-29 132.1 112 58.9
CSS0022976 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 7.2e-29 131.7 101 64.4
Sabra04G0094200 Salix brachista HOM05D002338 ORTHO05D006102 2.1e-28 130.2 249 33.7
SGA_v2.0_scaffold108G30962 Striga asiatica HOM05D006674 ORTHO05D007954 2.1e-28 130.2 137 47.4
Pp3c16_20720 Physcomitrium patens HOM05D006674 ORTHO05D007954 5.7e-26 122.1 123 51.2
Sopen11g006190 Solanum pennellii HOM05D006674 ORTHO05D007954 5.7e-26 122.1 155 45.8
ECA236G3280 Erigeron canadensis HOM05D006674 ORTHO05D007954 1.7e-25 120.6 80 65.0
AUR62042219 Chenopodium quinoa HOM05D006674 ORTHO05D007954 1.4e-24 117.5 103 57.3
FAN26G0259 Fragaria x ananassa HOM05D006674 ORTHO05D007954 4.5e-23 112.5 173 40.5
arahy.Tifrunner.gnm1.ann1.UE2S4S Arachis hypogaea HOM05D006674 ORTHO05D007954 2.9e-22 109.8 68 73.5
unitig_27.g24984 Utricularia gibba HOM05D006674 ORTHO05D007954 5.0e-22 109.0 78 64.1
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 6.5e-22 108.6 77 59.7
Lsat_1_v5_gn_1_78040 Lactuca sativa HOM05D006674 ORTHO05D007954 8.5e-22 108.2 120 50.0
Peaxi162Scf00562g00218 Petunia axillaris HOM05D006674 ORTHO05D007954 7.2e-21 105.1 112 54.5
arahy.Tifrunner.gnm1.ann1.V27PH4 Arachis hypogaea HOM05D006674 ORTHO05D007954 1.5e-18 97.4 131 44.3
CAN.G222.56 Capsicum annuum HOM05D006674 ORTHO05D007954 9.7e-18 94.7 121 45.5
Nitab4.5_0001650g0150 Nicotiana tabacum HOM05D006674 ORTHO05D007954 9.7e-18 94.7 121 47.1
Nitab4.5_0009806g0010 Nicotiana tabacum HOM05D006674 ORTHO05D007954 9.7e-18 94.7 121 47.1
COL.COLO4_13419 Corchorus olitorius HOM05D006674 ORTHO05D007954 2.2e-17 93.6 114 43.9
Prupe.3G166300 Prunus persica HOM05D006674 ORTHO05D007954 8.2e-17 91.7 97 47.4
MCO08G049 Micromonas commoda HOM05D006674 ORTHO05D007954 5.9e-15 85.5 73 53.4
Haze_14280 Corylus avellana HOM05D006674 ORTHO05D007954 2.9e-14 83.2 47 78.7
HPP92_002281 Vanilla planifolia HOM05D006674 ORTHO05D007954 3.2e-13 79.7 46 78.3
PGSC0003DMG400013236 Solanum tuberosum HOM05D006674 ORTHO05D007954 2.1e-12 77.0 47 74.5
Os04g0278200 Oryza sativa ssp. japonica HOM05D006674 ORTHO05D007954 3.0e-11 73.2 48 70.8


User provided reference genes

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