Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0752G219 Amborella trichopoda HOM05D006489 ORTHO05D007556 2.1e-302 1041.6 541 100.0
TAR627G0165 Trochodendron aralioides HOM05D006489 ORTHO05D007556 9.0e-91 338.6 529 43.1
MBI18_g45561_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 4.5e-82 309.7 531 40.9
MBI02_g07154_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 7.9e-79 298.9 434 43.8
vmacro09717 Vaccinium macrocarpon HOM05D006489 ORTHO05D007556 1.1e-77 295.0 447 41.6
Actinidia35341 Actinidia chinensis HOM05D006489 ORTHO05D007556 6.2e-76 289.3 536 38.4
Dinv22265 Davidia involucrata HOM05D006489 ORTHO05D007556 1.8e-75 287.7 426 43.2
Aqoxy1G03602 Aquilegia oxysepala HOM05D006489 ORTHO05D007556 2.4e-75 287.3 451 41.9
RhsimUnG0250900 Rhododendron simsii HOM05D006489 ORTHO05D007556 2.6e-74 283.9 363 45.2
CSS0036232 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 2.2e-73 280.8 433 42.0
CSS0017234 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 1.9e-72 277.7 433 41.8
Hma1.2p1_1162F.1_g262610 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 3.9e-70 270.0 423 41.6
COL.COLO4_19762 Corchorus olitorius HOM05D006489 ORTHO05D007556 3.3e-69 266.9 426 40.6
Ciclev10008166m.g Citrus clementina HOM05D006489 ORTHO05D007556 4.8e-68 263.1 475 37.7
Potri.011G139200 Populus trichocarpa HOM05D006489 ORTHO05D007556 4.8e-68 263.1 528 37.9
TWI15G0832 Tripterygium wilfordii HOM05D006489 ORTHO05D007556 4.8e-68 263.1 428 41.8
AT3G20490 Arabidopsis thaliana HOM05D006489 ORTHO05D007556 1.1e-67 261.9 532 36.8
Gorai.004G027700 Gossypium raimondii HOM05D006489 ORTHO05D007556 1.1e-67 261.9 534 37.1
Duzib213G0414 Durio zibethinus HOM05D006489 ORTHO05D007556 3.4e-66 256.9 533 35.1
Gohir.D08G030200 Gossypium hirsutum HOM05D006489 ORTHO05D007556 2.9e-65 253.8 531 36.2
Haze_09673 Corylus avellana HOM05D006489 ORTHO05D007556 3.8e-65 253.4 485 37.1
Cpa.g.sc97.9 Carica papaya HOM05D006489 ORTHO05D007556 6.5e-65 252.7 458 38.0
Sabra11G0125100 Salix brachista HOM05D006489 ORTHO05D007556 8.5e-65 252.3 528 36.7
CARHR096250 Cardamine hirsuta HOM05D006489 ORTHO05D007556 3.2e-64 250.4 545 37.1
Oeu062694.1 Olea europaea HOM05D006489 ORTHO05D007556 3.2e-64 250.4 416 39.4
QL08p010454 Quercus lobata HOM05D006489 ORTHO05D007556 3.2e-64 250.4 499 36.5
Peaxi162Scf00964g00023 Petunia axillaris HOM05D006489 ORTHO05D007556 1.6e-63 248.1 420 39.8
AL3G34270 Arabidopsis lyrata HOM05D006489 ORTHO05D007556 2.1e-63 247.7 531 35.8
Carub.0003s2045 Capsella rubella HOM05D006489 ORTHO05D007556 1.8e-62 244.6 521 35.9
Nn1g03547 Nelumbo nucifera HOM05D006489 ORTHO05D007556 1.5e-61 241.5 515 35.3
CDE02G1695 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 1.7e-60 238.0 455 37.8
Sc03g0008610 Simmondsia chinensis HOM05D006489 ORTHO05D007556 1.7e-60 238.0 375 40.8
CiPaw.12G129400 Carya illinoinensis HOM05D006489 ORTHO05D007556 2.8e-60 237.3 535 33.8
Cc09_g09720 Coffea canephora HOM05D006489 ORTHO05D007556 2.8e-60 237.3 422 37.9
PGSC0003DMG400022321 Solanum tuberosum HOM05D006489 ORTHO05D007556 6.3e-60 236.1 435 38.4
Gohir.A08G019600 Gossypium hirsutum HOM05D006489 ORTHO05D007556 3.1e-59 233.8 483 35.4
Sopen07g032750 Solanum pennellii HOM05D006489 ORTHO05D007556 5.3e-59 233.0 439 38.3
TPR.G1166 Trifolium pratense HOM05D006489 ORTHO05D007556 9.1e-59 232.3 476 37.4
Solyc07g064570.3 Solanum lycopersicum HOM05D006489 ORTHO05D007556 1.5e-58 231.5 444 37.8
CAN.G337.129 Capsicum annuum HOM05D006489 ORTHO05D007556 3.4e-58 230.3 421 37.5
AUR62015766 Chenopodium quinoa HOM05D006489 ORTHO05D007556 6.5e-57 226.1 613 33.8
PGR083G1541 Punica granatum HOM05D006489 ORTHO05D007556 8.5e-57 225.7 417 39.3
Aa31LG8G7280 Aethionema arabicum HOM05D006489 ORTHO05D007556 1.9e-56 224.6 426 38.7
DCAR_022559 Daucus carota HOM05D006489 ORTHO05D007556 2.5e-56 224.2 441 36.7
HPP92_013323 Vanilla planifolia HOM05D006489 ORTHO05D007556 3.2e-56 223.8 446 36.5
Migut.M01768 Erythranthe guttata HOM05D006489 ORTHO05D007556 1.0e-54 218.8 433 37.0
Hund23251 Selenicereus undatus HOM05D006489 ORTHO05D007556 1.8e-54 218.0 452 36.7
CDE05G3553 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 2.3e-54 217.6 557 33.2
EL10Ac4g07823 Beta vulgaris HOM05D006489 ORTHO05D007556 5.1e-54 216.5 584 31.2
Atru.chr2.3342 Acer truncatum HOM05D006489 ORTHO05D007556 6.7e-54 216.1 321 42.1
PSO675G7358 Papaver somniferum HOM05D006489 ORTHO05D007556 1.5e-53 214.9 343 41.4
Manes.03G129000 Manihot esculenta HOM05D006489 ORTHO05D007556 4.4e-53 213.4 532 34.2
PSO541G0970 Papaver somniferum HOM05D006489 ORTHO05D007556 1.3e-52 211.8 431 37.6
THA.LOC104817868 Tarenaya hassleriana HOM05D006489 ORTHO05D007556 1.3e-52 211.8 408 36.8
Lsat_1_v5_gn_9_94040 Lactuca sativa HOM05D006489 ORTHO05D007556 1.7e-52 211.5 436 38.5
SGA_v2.0_scaffold80G25948 Striga asiatica HOM05D006489 ORTHO05D007556 1.7e-52 211.5 424 36.1
Prupe.4G212300 Prunus persica HOM05D006489 ORTHO05D007556 2.2e-52 211.1 456 35.3
BraA04t16706Z Brassica rapa HOM05D006489 ORTHO05D007556 2.8e-52 210.7 478 36.4
Cfa020351 Carpinus fangiana HOM05D006489 ORTHO05D007556 3.7e-52 210.3 513 32.7
HanXRQChr03g0076541 Helianthus annuus HOM05D006489 ORTHO05D007556 6.3e-52 209.5 440 37.0
HanXRQChr08g0220561 Helianthus annuus HOM05D006489 ORTHO05D007556 6.3e-52 209.5 450 36.2
Hma1.2p1_1162F.1_g262600 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 8.2e-52 209.1 384 37.2
Lj1A872T56 Lonicera japonica HOM05D006489 ORTHO05D007556 8.2e-52 209.1 340 38.2
GSVIVG01037644001 Vitis vinifera HOM05D006489 ORTHO05D007556 8.2e-52 209.1 440 35.2
LjContig00272g0011286 Lotus japonicus HOM05D006489 ORTHO05D007556 1.1e-51 208.8 475 32.8
Sed0018772 Sechium edule HOM05D006489 ORTHO05D007556 4.1e-51 206.8 487 35.1
Lalb_Chr17g0348451 Lupinus albus HOM05D006489 ORTHO05D007556 2.0e-50 204.5 576 30.4
Eucgr.F00766 Eucalyptus grandis HOM05D006489 ORTHO05D007556 1.3e-49 201.8 371 37.7
Ca_06317_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 1.7e-49 201.4 519 32.9
BcaB06g27045 Brassica carinata HOM05D006489 ORTHO05D007556 2.9e-49 200.7 568 32.0
Glyma.02G290600 Glycine max HOM05D006489 ORTHO05D007556 8.5e-49 199.1 562 32.0
ECA240G0124 Erigeron canadensis HOM05D006489 ORTHO05D007556 1.1e-48 198.7 402 36.6
Medtr5g092580 Medicago truncatula HOM05D006489 ORTHO05D007556 2.5e-48 197.6 556 31.3
Ca_25386_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 4.2e-48 196.8 477 34.2
MELO3C013233.2 Cucumis melo HOM05D006489 ORTHO05D007556 5.5e-48 196.4 508 32.1
FAN25G3282 Fragaria x ananassa HOM05D006489 ORTHO05D007556 5.5e-48 196.4 442 33.7
ClCG05G014300 Citrullus lanatus HOM05D006489 ORTHO05D007556 1.2e-47 195.3 465 33.8
Nitab4.5_0011175g0010 Nicotiana tabacum HOM05D006489 ORTHO05D007556 2.7e-47 194.1 397 35.3
Nitab4.5_0001913g0140 Nicotiana tabacum HOM05D006489 ORTHO05D007556 4.7e-47 193.4 401 34.4
CANSAT11G2482 Cannabis sativa HOM05D006489 ORTHO05D007556 3.9e-46 190.3 598 29.9
VMungo0647G1504 Vigna mungo HOM05D006489 ORTHO05D007556 1.5e-45 188.3 513 32.6
arahy.Tifrunner.gnm1.ann1.I0Q6ZZ Arachis hypogaea HOM05D006489 ORTHO05D007556 5.7e-45 186.4 495 30.3
Sed0021471 Sechium edule HOM05D006489 ORTHO05D007556 1.3e-44 185.3 424 34.0
Phvul.008G267300 Phaseolus vulgaris HOM05D006489 ORTHO05D007556 1.7e-44 184.9 519 32.4
Atru.BG.151.p Acer truncatum HOM05D006489 ORTHO05D007556 6.3e-44 183.0 375 34.1
arahy.Tifrunner.gnm1.ann1.X6VDEX Arachis hypogaea HOM05D006489 ORTHO05D007556 4.1e-43 180.3 457 31.5
AUR62020449 Chenopodium quinoa HOM05D006489 ORTHO05D007556 4.1e-43 180.3 575 30.8
Psat2g011040 Pisum sativum HOM05D006489 ORTHO05D007556 1.2e-42 178.7 481 34.7
BcaC02g09533 Brassica carinata HOM05D006489 ORTHO05D007556 3.5e-42 177.2 582 31.1
BolC4t25966H Brassica oleracea HOM05D006489 ORTHO05D007556 3.5e-42 177.2 582 31.1
C04p43850 Brassica napus HOM05D006489 ORTHO05D007556 5.9e-42 176.4 583 31.4
A04p10340 Brassica napus HOM05D006489 ORTHO05D007556 1.0e-41 175.6 585 30.9
MD03G1201600 Malus domestica HOM05D006489 ORTHO05D007556 1.3e-41 175.3 580 30.0
RcHm_v2.0_Chr5g0039401 Rosa chinensis HOM05D006489 ORTHO05D007556 2.2e-41 174.5 381 33.3
Os04g0625100 Oryza sativa ssp. japonica HOM05D006489 ORTHO05D007556 3.8e-41 173.7 391 34.3
Zm00001eb431300 Zea mays HOM05D006489 ORTHO05D007556 8.5e-41 172.6 446 33.6
Thecc.07G037900 Theobroma cacao HOM05D006489 ORTHO05D007556 1.1e-40 172.2 414 33.1
FAN21G0022 Fragaria x ananassa HOM05D006489 ORTHO05D007556 8.0e-39 166.0 363 34.4
TPR.G36685 Trifolium pratense HOM05D006489 ORTHO05D007556 5.2e-38 163.3 549 29.1
Lalb_Chr10g0106941 Lupinus albus HOM05D006489 ORTHO05D007556 2.0e-37 161.4 394 34.3
Glyma.14G024100 Glycine max HOM05D006489 ORTHO05D007556 1.7e-36 158.3 382 33.0
FvH4_3g22630 Fragaria vesca HOM05D006489 ORTHO05D007556 8.2e-36 156.0 362 33.1
CsaV3_7G021220 Cucumis sativus L. HOM05D006489 ORTHO05D007556 3.1e-35 154.1 470 31.9
Medtr6g033325 Medicago truncatula HOM05D006489 ORTHO05D007556 3.1e-35 154.1 346 34.7
Thhalv10028177m.g Eutrema salsugineum HOM05D006489 ORTHO05D007556 5.3e-35 153.3 445 32.8
Sp7g05570 Schrenkiella parvula HOM05D006489 ORTHO05D007556 1.3e-33 148.7 254 38.2
SEGI_05401 Sequoiadendron giganteum HOM05D006489 ORTHO05D007556 4.2e-32 143.7 550 30.9
HanXRQChr11g0337701 Helianthus annuus HOM05D006489 ORTHO05D007556 3.0e-30 137.5 218 41.3
Lsat_1_v5_gn_7_108561 Lactuca sativa HOM05D006489 ORTHO05D007556 2.7e-26 124.4 175 44.0
unitig_62.g23281 Utricularia gibba HOM05D008272 ORTHO05D010429 3.5e-26 124.0 383 30.5
Psat1g097920 Pisum sativum HOM05D006489 ORTHO05D007556 6.6e-25 119.8 312 32.4
ECA236G1547 Erigeron canadensis HOM05D006489 ORTHO05D007556 2.3e-22 111.3 179 41.3
FAN16G1490 Fragaria x ananassa HOM05D006489 ORTHO05D007556 3.0e-22 110.9 243 35.8
Actinidia10733 Actinidia chinensis HOM05D006489 ORTHO05D007556 1.1e-16 92.4 175 38.3
Psat0s2568g0040 Pisum sativum HOM05D006489 ORTHO05D007556 2.2e-12 78.2 105 43.8
Lj8A169G92 Lonicera japonica HOM05D006489 ORTHO05D007556 6.4e-12 76.6 59 59.3
Mapoly0045s0076 Marchantia polymorpha HOM05D006489 ORTHO05D007556 2.4e-11 74.7 266 27.1
AagrBONN_evm.TU.Sc2ySwM_228.1621 Anthoceros agrestis HOM05D006489 ORTHO05D007556 8.9e-06 56.2 146 30.8


User provided reference genes

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