Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0752G192 Amborella trichopoda HOM05D005555 ORTHO05D006923 4.1e-211 738.0 436 100.0
TAR627G0887 Trochodendron aralioides HOM05D005555 ORTHO05D006923 2.2e-172 609.4 437 73.7
GSVIVG01037655001 Vitis vinifera HOM05D005555 ORTHO05D006923 7.3e-168 594.3 429 71.3
Nn1g07133 Nelumbo nucifera HOM05D005555 ORTHO05D006923 5.2e-166 588.2 428 72.0
Gorai.009G438400 Gossypium raimondii HOM05D005555 ORTHO05D006923 2.9e-164 582.4 432 70.1
Dinv22259 Davidia involucrata HOM05D005555 ORTHO05D006923 3.8e-164 582.0 437 71.9
Gohir.A04G016500 Gossypium hirsutum HOM05D005555 ORTHO05D006923 1.4e-163 580.1 432 73.6
Gohir.D05G369700 Gossypium hirsutum HOM05D005555 ORTHO05D006923 5.4e-163 578.2 432 75.2
Eucgr.F03470 Eucalyptus grandis HOM05D005555 ORTHO05D006923 2.1e-162 576.2 427 71.2
Manes.15G071400 Manihot esculenta HOM05D005555 ORTHO05D006923 2.7e-162 575.9 430 75.8
Duzib268G1179 Durio zibethinus HOM05D005555 ORTHO05D006923 6.0e-162 574.7 424 70.3
CSS0046165 Camellia sinensis var. sinensis HOM05D005555 ORTHO05D006923 1.7e-161 573.2 432 69.0
TWI39G0347 Tripterygium wilfordii HOM05D005555 ORTHO05D006923 1.7e-161 573.2 430 70.5
Cpa.g.sc12.303 Carica papaya HOM05D005555 ORTHO05D006923 6.6e-161 571.2 436 73.4
Thecc.07G035900 Theobroma cacao HOM05D005555 ORTHO05D006923 1.1e-160 570.5 432 72.0
QL08p010014 Quercus lobata HOM05D005555 ORTHO05D006923 1.9e-160 569.7 425 68.9
Ciclev10008353m.g Citrus clementina HOM05D005555 ORTHO05D006923 2.8e-159 565.8 436 70.0
Actinidia35345 Actinidia chinensis HOM05D005555 ORTHO05D006923 3.6e-159 565.5 432 72.2
CsaV3_7G021840 Cucumis sativus L. HOM05D005555 ORTHO05D006923 6.2e-159 564.7 428 68.5
PSO541G4760 Papaver somniferum HOM05D005555 ORTHO05D006923 8.1e-159 564.3 422 70.4
Aqoxy1G02148 Aquilegia oxysepala HOM05D005555 ORTHO05D006923 6.9e-158 561.2 420 70.0
Sed0005603 Sechium edule HOM05D005555 ORTHO05D006923 6.9e-158 561.2 428 68.5
CDE04G3207 Ceratophyllum demersum HOM05D005555 ORTHO05D006923 2.0e-157 559.7 427 69.6
CiPaw.12G130100 Carya illinoinensis HOM05D005555 ORTHO05D006923 2.6e-157 559.3 429 68.5
Lj8C169T24 Lonicera japonica HOM05D005555 ORTHO05D006923 2.6e-157 559.3 457 70.5
PSO675G4173 Papaver somniferum HOM05D005555 ORTHO05D006923 7.6e-157 557.8 422 71.6
THA.LOC104817858 Tarenaya hassleriana HOM05D005555 ORTHO05D006923 2.9e-156 555.8 428 68.7
CSS0038584 Camellia sinensis var. sinensis HOM05D005555 ORTHO05D006923 1.4e-155 553.5 432 70.1
CiPaw.11G190000 Carya illinoinensis HOM05D005555 ORTHO05D006923 1.4e-155 553.5 432 69.4
FAN14G2902 Fragaria x ananassa HOM05D005555 ORTHO05D006923 1.4e-155 553.5 436 69.7
RcHm_v2.0_Chr2g0139231 Rosa chinensis HOM05D005555 ORTHO05D006923 2.4e-155 552.7 436 67.4
MD17G1190200 Malus domestica HOM05D005555 ORTHO05D006923 1.2e-154 550.4 427 73.8
FAN05G3309 Fragaria x ananassa HOM05D005555 ORTHO05D006923 2.1e-154 549.7 436 69.7
Rhsim06G0217300 Rhododendron simsii HOM05D005555 ORTHO05D006923 3.5e-154 548.9 444 67.8
MSTRG.6923 Avicennia marina HOM05D005555 ORTHO05D006923 6.0e-154 548.1 437 67.5
Lj6g0008930 Lotus japonicus HOM05D005555 ORTHO05D006923 6.0e-154 548.1 430 64.9
DCAR_016709 Daucus carota HOM05D005555 ORTHO05D006923 7.8e-154 547.7 420 75.7
CANSAT11G1088 Cannabis sativa HOM05D005555 ORTHO05D006923 1.3e-153 547.0 427 70.3
Thhalv10011513m.g Eutrema salsugineum HOM05D005555 ORTHO05D006923 1.3e-153 547.0 427 71.4
Gorai.009G438500 Gossypium raimondii HOM05D005555 ORTHO05D006923 1.3e-153 547.0 432 71.8
VMungo0540G1244 Vigna mungo HOM05D005555 ORTHO05D006923 1.3e-153 547.0 428 65.2
arahy.Tifrunner.gnm1.ann1.UR7PB1 Arachis hypogaea HOM05D005555 ORTHO05D006923 1.7e-153 546.6 428 66.1
Prupe.3G065100 Prunus persica HOM05D005555 ORTHO05D006923 1.7e-153 546.6 417 72.7
Glyma.08G316800 Glycine max HOM05D005555 ORTHO05D006923 5.1e-153 545.0 428 65.7
Aa31LG10G3630 Aethionema arabicum HOM05D005555 ORTHO05D006923 8.7e-153 544.3 428 71.3
BcaC08g43248 Brassica carinata HOM05D005555 ORTHO05D006923 8.7e-153 544.3 427 67.7
C06p05960 Brassica napus HOM05D005555 ORTHO05D006923 8.7e-153 544.3 427 67.7
BolC6t35709H Brassica oleracea HOM05D005555 ORTHO05D006923 8.7e-153 544.3 427 67.7
Phvul.006G044000 Phaseolus vulgaris HOM05D005555 ORTHO05D006923 8.7e-153 544.3 428 65.4
A06p02920 Brassica napus HOM05D005555 ORTHO05D006923 1.1e-152 543.9 427 67.7
BraA06t23497Z Brassica rapa HOM05D005555 ORTHO05D006923 1.1e-152 543.9 427 67.7
arahy.Tifrunner.gnm1.ann1.P3VUIG Arachis hypogaea HOM05D005555 ORTHO05D006923 1.5e-152 543.5 428 65.9
Potri.011G090800 Populus trichocarpa HOM05D005555 ORTHO05D006923 1.9e-152 543.1 427 74.7
Sp1g37550 Schrenkiella parvula HOM05D005555 ORTHO05D006923 3.3e-152 542.3 418 68.9
Glyma.18G096300 Glycine max HOM05D005555 ORTHO05D006923 5.6e-152 541.6 428 64.7
BcaC08g43250 Brassica carinata HOM05D005555 ORTHO05D006923 2.1e-151 539.7 427 67.0
arahy.Tifrunner.gnm1.ann1.QY89IE Arachis hypogaea HOM05D005555 ORTHO05D006923 4.8e-151 538.5 428 65.7
Migut.M01757 Erythranthe guttata HOM05D005555 ORTHO05D006923 4.8e-151 538.5 434 65.9
Lalb_Chr20g0113831 Lupinus albus HOM05D005555 ORTHO05D006923 4.8e-151 538.5 431 65.4
ECA240G0357 Erigeron canadensis HOM05D005555 ORTHO05D006923 6.2e-151 538.1 419 66.8
AL1G58400 Arabidopsis lyrata HOM05D005555 ORTHO05D006923 6.9e-150 534.6 427 67.0
Carub.0001s3974 Capsella rubella HOM05D005555 ORTHO05D006923 6.9e-150 534.6 427 67.0
BcaB02g11175 Brassica carinata HOM05D005555 ORTHO05D006923 3.4e-149 532.3 427 66.7
Lsat_1_v5_gn_2_47780 Lactuca sativa HOM05D005555 ORTHO05D006923 3.4e-149 532.3 421 66.7
Nn1g03520 Nelumbo nucifera HOM05D005555 ORTHO05D006923 4.5e-149 531.9 427 66.5
Hund15555 Selenicereus undatus HOM05D005555 ORTHO05D006923 4.5e-149 531.9 427 65.3
AT1G50710 Arabidopsis thaliana HOM05D005555 ORTHO05D006923 7.6e-149 531.2 427 66.7
PGR031G0129 Punica granatum HOM05D005555 ORTHO05D006923 9.9e-149 530.8 431 70.5
DCAR_001508 Daucus carota HOM05D005555 ORTHO05D006923 3.8e-148 528.9 420 74.5
MBI05_g12021_MAGBIO Magnolia biondii HOM05D005555 ORTHO05D006923 6.4e-148 528.1 424 69.1
Atru.chr2.3417 Acer truncatum HOM05D005555 ORTHO05D006923 8.4e-148 527.7 421 70.5
ClCG09G010820 Citrullus lanatus HOM05D005555 ORTHO05D006923 3.2e-147 525.8 472 61.0
SGA_v2.0_scaffold172G39000 Striga asiatica HOM05D005555 ORTHO05D006923 4.2e-147 525.4 439 62.4
TPR.G33802 Trifolium pratense HOM05D005555 ORTHO05D006923 5.4e-147 525.0 432 63.4
Medtr3g052180 Medicago truncatula HOM05D005555 ORTHO05D006923 9.3e-147 524.2 423 63.8
EL10Ac2g03146 Beta vulgaris HOM05D005555 ORTHO05D006923 2.1e-146 523.1 448 66.1
CARHR040810 Cardamine hirsuta HOM05D005555 ORTHO05D006923 2.7e-146 522.7 427 65.3
Solyc12g005050.2 Solanum lycopersicum HOM05D005555 ORTHO05D006923 3.5e-146 522.3 430 64.0
Nitab4.5_0008473g0010 Nicotiana tabacum HOM05D005555 ORTHO05D006923 6.0e-146 521.5 428 66.6
Psat5g178680 Pisum sativum HOM05D005555 ORTHO05D006923 6.0e-146 521.5 423 63.4
Sopen12g001050 Solanum pennellii HOM05D005555 ORTHO05D006923 5.1e-145 518.5 430 63.5
PGSC0003DMG400027869 Solanum tuberosum HOM05D005555 ORTHO05D006923 5.6e-144 515.0 431 66.8
Medtr5g049170 Medicago truncatula HOM05D005555 ORTHO05D006923 9.6e-144 514.2 423 62.9
BraA05t20906Z Brassica rapa HOM05D005555 ORTHO05D006923 1.3e-143 513.8 414 65.9
MD09G1208700 Malus domestica HOM05D005555 ORTHO05D006923 1.3e-143 513.8 421 71.3
arahy.Tifrunner.gnm1.ann1.GVQ212 Arachis hypogaea HOM05D005555 ORTHO05D006923 1.6e-143 513.5 463 63.7
HanXRQChr03g0076481 Helianthus annuus HOM05D005555 ORTHO05D006923 2.8e-143 512.7 403 66.5
Ah.10g032310 Amaranthus hybridus HOM05D005555 ORTHO05D006923 4.8e-143 511.9 430 65.3
CAN.G542.3 Capsicum annuum HOM05D005555 ORTHO05D006923 3.1e-142 509.2 426 66.2
MELO3C013162.2 Cucumis melo HOM05D005555 ORTHO05D006923 9.0e-142 507.7 439 62.6
Cc07_g19690 Coffea canephora HOM05D005555 ORTHO05D006923 1.2e-141 507.3 425 63.1
Cc05_g13620 Coffea canephora HOM05D005555 ORTHO05D006923 1.5e-141 506.9 424 63.0
A05p19990 Brassica napus HOM05D005555 ORTHO05D006923 2.6e-141 506.1 414 65.7
Sc03g0008570 Simmondsia chinensis HOM05D005555 ORTHO05D006923 5.8e-141 505.0 387 69.0
FAN02G4472 Fragaria x ananassa HOM05D005555 ORTHO05D006923 2.2e-140 503.1 436 61.2
CSS0007038 Camellia sinensis var. sinensis HOM05D005555 ORTHO05D006923 1.9e-139 500.0 445 62.2
Sabra11G0086200 Salix brachista HOM05D005555 ORTHO05D006923 1.6e-138 496.9 427 69.1
unitig_744.g24404 Utricularia gibba HOM05D005555 ORTHO05D006923 1.5e-136 490.3 424 61.3
BcaB07g33510 Brassica carinata HOM05D005555 ORTHO05D006923 2.4e-134 483.0 441 61.0
Nitab4.5_0000981g0050 Nicotiana tabacum HOM05D005555 ORTHO05D006923 2.0e-133 479.9 470 60.6
HPP92_010410 Vanilla planifolia HOM05D005555 ORTHO05D006923 2.0e-133 479.9 420 62.4
MD03G1200100 Malus domestica HOM05D005555 ORTHO05D006923 3.5e-130 469.2 429 58.3
vmacro11723 Vaccinium macrocarpon HOM05D005555 ORTHO05D006923 2.3e-129 466.5 523 56.2
Cfa020338 Carpinus fangiana HOM05D005555 ORTHO05D006923 3.9e-129 465.7 382 69.1
Ca_14731_v3 Cicer arietinum L. HOM05D005555 ORTHO05D006923 5.1e-129 465.3 509 50.7
Peaxi162Scf00660g00816 Petunia axillaris HOM05D005555 ORTHO05D006923 7.4e-128 461.5 392 65.3
SMO352G0045 Selaginella moellendorffii HOM05D005555 ORTHO05D006923 3.7e-127 459.1 417 59.2
Haze_09680 Corylus avellana HOM05D005555 ORTHO05D006923 4.8e-127 458.8 483 59.4
AUR62018195 Chenopodium quinoa HOM05D005555 ORTHO05D006923 1.4e-126 457.2 432 60.0
Dinv40759 Davidia involucrata HOM05D005555 ORTHO05D006923 6.5e-124 448.4 385 67.0
Mapoly0032s0110 Marchantia polymorpha HOM05D005555 ORTHO05D006923 4.2e-123 445.7 442 56.8
RcHm_v2.0_Chr5g0039771 Rosa chinensis HOM05D005555 ORTHO05D006923 4.6e-122 442.2 434 56.2
Zm00001eb230170 Zea mays HOM05D005555 ORTHO05D006923 2.3e-121 439.9 433 60.3
HanXRQChr05g0134351 Helianthus annuus HOM05D005555 ORTHO05D006923 3.9e-121 439.1 419 58.2
Gohir.D05G370300 Gossypium hirsutum HOM05D005555 ORTHO05D006923 1.4e-118 430.6 380 66.6
FvH4_3g22760 Fragaria vesca HOM05D005555 ORTHO05D006923 4.1e-118 429.1 429 55.7
Pp3c17_11280 Physcomitrium patens HOM05D005555 ORTHO05D006923 5.5e-115 418.7 424 55.0
Gohir.D05G369900 Gossypium hirsutum HOM05D005555 ORTHO05D006923 1.6e-114 417.2 432 56.5
FvH4_6g31880 Fragaria vesca HOM05D005555 ORTHO05D006923 3.1e-110 402.9 325 69.5
Prupe.4G214200 Prunus persica HOM05D005555 ORTHO05D006923 5.9e-109 398.7 372 58.6
Sed0020027 Sechium edule HOM05D005555 ORTHO05D006923 6.5e-108 395.2 396 57.8
FAN16G3656 Fragaria x ananassa HOM05D005555 ORTHO05D006923 4.2e-107 392.5 441 51.2
arahy.Tifrunner.gnm1.ann1.92YVPD Arachis hypogaea HOM05D005555 ORTHO05D006923 1.2e-101 374.4 422 49.5
TPR.G5778 Trifolium pratense HOM05D005555 ORTHO05D006923 2.0e-101 373.6 339 57.2
AUR62038682 Chenopodium quinoa HOM05D005555 ORTHO05D006923 1.4e-97 360.9 430 52.8
arahy.Tifrunner.gnm1.ann1.21WID0 Arachis hypogaea HOM05D005555 ORTHO05D006923 1.9e-91 340.5 429 45.7
FAN25G0297 Fragaria x ananassa HOM05D005555 ORTHO05D006923 1.2e-88 331.3 368 51.9
CBR_g19746 Chara braunii HOM05D005555 ORTHO05D006923 5.8e-64 249.2 384 38.8
CBR_g6714 Chara braunii HOM05D005555 ORTHO05D006923 1.2e-61 241.5 442 37.8
Medtr5g049150 Medicago truncatula HOM05D005555 ORTHO05D006923 1.9e-51 207.6 216 50.5
Os02g0119100 Oryza sativa ssp. japonica HOM05D005555 ORTHO05D006923 7.6e-32 142.5 204 58.8
TPR.G5733 Trifolium pratense HOM05D005555 ORTHO05D006923 3.3e-27 127.1 84 75.0
Lsat_1_v5_gn_9_94361 Lactuca sativa HOM05D005555 ORTHO05D006923 9.0e-17 92.4 55 76.4
Hma1.2p1_0206F.1_g087650 Hydrangea macrophylla HOM05D005555 ORTHO05D006923 1.0e-15 89.0 44 93.2
Hma1.2p1_0545F.1_g176020 Hydrangea macrophylla HOM05D005555 ORTHO05D006923 1.0e-15 89.0 44 93.2


User provided reference genes

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