Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0752G146 Amborella trichopoda HOM05D003428 ORTHO05D004131 2.1e-70 268.9 133 100.0
TAR624G0497 Trochodendron aralioides HOM05D003428 ORTHO05D004131 3.7e-38 161.8 133 63.9
Aqoxy7G03064 Aquilegia oxysepala HOM05D003428 ORTHO05D004131 3.2e-34 148.7 130 60.0
CiPaw.09G089300 Carya illinoinensis HOM05D003428 ORTHO05D004131 5.5e-34 147.9 131 59.5
Thecc.06G217400 Theobroma cacao HOM05D003428 ORTHO05D004131 7.2e-34 147.5 132 57.6
Nn1g03583 Nelumbo nucifera HOM05D003428 ORTHO05D004131 6.1e-33 144.4 130 57.7
Dinv20034 Davidia involucrata HOM05D003428 ORTHO05D004131 3.0e-32 142.1 131 58.0
AUR62021981 Chenopodium quinoa HOM05D003428 ORTHO05D004131 4.0e-32 141.7 129 57.4
Glyma.17G015200 Glycine max HOM05D003428 ORTHO05D004131 6.8e-32 141.0 133 55.6
HPP92_017608 Vanilla planifolia HOM05D003428 ORTHO05D004131 8.8e-32 140.6 130 54.6
CSS0019319 Camellia sinensis var. sinensis HOM05D003428 ORTHO05D004131 1.2e-31 140.2 132 56.8
AUR62012675 Chenopodium quinoa HOM05D003428 ORTHO05D004131 1.2e-31 140.2 129 56.6
COL.COLO4_31743 Corchorus olitorius HOM05D003428 ORTHO05D004131 1.2e-31 140.2 132 55.3
Rhsim02G0110400 Rhododendron simsii HOM05D003428 ORTHO05D004131 1.2e-31 140.2 131 55.7
GSVIVG01012655001 Vitis vinifera HOM05D003428 ORTHO05D004131 1.2e-31 140.2 130 57.7
MBI02_g28339_MAGBIO Magnolia biondii HOM05D003428 ORTHO05D004131 3.4e-31 138.7 129 57.4
Duzib235G0114 Durio zibethinus HOM05D003428 ORTHO05D004131 4.4e-31 138.3 133 55.6
Potri.011G000200 Populus trichocarpa HOM05D003428 ORTHO05D004131 5.7e-31 137.9 134 56.7
CSS0033465 Camellia sinensis var. sinensis HOM05D003428 ORTHO05D004131 7.5e-31 137.5 131 55.7
Phvul.003G077100 Phaseolus vulgaris HOM05D003428 ORTHO05D004131 9.7e-31 137.1 132 54.5
EL10Ac8g20020 Beta vulgaris HOM05D003428 ORTHO05D004131 1.3e-30 136.7 129 55.0
Hma1.2p1_3566F.1_g336810 Hydrangea macrophylla HOM05D003428 ORTHO05D004131 1.7e-30 136.3 132 54.5
Ciclev10014053m.g Citrus clementina HOM05D003428 ORTHO05D004131 2.8e-30 135.6 133 58.6
PSO832G0075 Papaver somniferum HOM05D003428 ORTHO05D004131 2.8e-30 135.6 134 53.7
Hma1.2p1_1622F.1_g294060 Hydrangea macrophylla HOM05D003428 ORTHO05D004131 3.7e-30 135.2 132 53.8
PSO210G3795 Papaver somniferum HOM05D003428 ORTHO05D004131 3.7e-30 135.2 134 53.7
VMungo1215G2587 Vigna mungo HOM05D003428 ORTHO05D004131 3.7e-30 135.2 128 56.2
Zm00001eb322860 Zea mays HOM05D003428 ORTHO05D004131 3.7e-30 135.2 129 55.8
Glyma.07G259000 Glycine max HOM05D003428 ORTHO05D004131 8.3e-30 134.0 132 53.8
Lj4g0005527 Lotus japonicus HOM05D003428 ORTHO05D004131 8.3e-30 134.0 133 53.4
Lalb_Chr15g0087431 Lupinus albus HOM05D003428 ORTHO05D004131 1.4e-29 133.3 133 54.1
TPR.G37012 Trifolium pratense HOM05D003428 ORTHO05D004131 1.4e-29 133.3 131 52.7
vmacro15816 Vaccinium macrocarpon HOM05D003428 ORTHO05D004131 1.8e-29 132.9 131 55.0
Prupe.4G024000 Prunus persica HOM05D003428 ORTHO05D004131 3.1e-29 132.1 133 52.6
PGR042G0159 Punica granatum HOM05D003428 ORTHO05D004131 3.1e-29 132.1 133 51.9
MD10G1317800 Malus domestica HOM05D003428 ORTHO05D004131 4.1e-29 131.7 135 51.9
TWI38G0331 Tripterygium wilfordii HOM05D003428 ORTHO05D004131 5.3e-29 131.3 135 55.6
Hund23486 Selenicereus undatus HOM05D003428 ORTHO05D004131 7.0e-29 131.0 129 54.3
Cpa.g.sc198.26 Carica papaya HOM05D003428 ORTHO05D004131 9.1e-29 130.6 130 53.1
arahy.Tifrunner.gnm1.ann1.D341M5 Arachis hypogaea HOM05D003428 ORTHO05D004131 1.6e-28 129.8 132 51.5
Eucgr.E04091 Eucalyptus grandis HOM05D003428 ORTHO05D004131 1.6e-28 129.8 137 51.8
MD05G1342900 Malus domestica HOM05D003428 ORTHO05D004131 1.6e-28 129.8 135 51.9
arahy.Tifrunner.gnm1.ann1.YW42SM Arachis hypogaea HOM05D003428 ORTHO05D004131 2.7e-28 129.0 132 51.5
CDE05G1926 Ceratophyllum demersum HOM05D003428 ORTHO05D004131 2.7e-28 129.0 124 52.4
Gorai.010G179100 Gossypium raimondii HOM05D003428 ORTHO05D004131 2.7e-28 129.0 132 52.3
Ca_21094_v3 Cicer arietinum L. HOM05D003428 ORTHO05D004131 3.5e-28 128.6 131 54.2
Ca_30202_v3 Cicer arietinum L. HOM05D003428 ORTHO05D004131 3.5e-28 128.6 131 54.2
CsaV3_1G010910 Cucumis sativus L. HOM05D003428 ORTHO05D004131 3.5e-28 128.6 133 52.6
Gohir.A06G147300 Gossypium hirsutum HOM05D003428 ORTHO05D004131 3.5e-28 128.6 132 53.0
Peaxi162Scf00262g00059 Petunia axillaris HOM05D003428 ORTHO05D004131 4.5e-28 128.3 129 53.5
CAN.G569.22 Capsicum annuum HOM05D003428 ORTHO05D004131 5.9e-28 127.9 131 52.7
ClCG03G004880 Citrullus lanatus HOM05D003428 ORTHO05D004131 7.7e-28 127.5 133 51.9
Gohir.D06G153100 Gossypium hirsutum HOM05D003428 ORTHO05D004131 7.7e-28 127.5 132 52.3
Cfa000250 Carpinus fangiana HOM05D003428 ORTHO05D004131 1.0e-27 127.1 121 59.5
Potri.004G018700 Populus trichocarpa HOM05D003428 ORTHO05D004131 1.3e-27 126.7 133 51.9
QL05p074042 Quercus lobata HOM05D003428 ORTHO05D004131 1.3e-27 126.7 128 54.7
Cc09_g01930 Coffea canephora HOM05D003428 ORTHO05D004131 2.2e-27 125.9 130 50.0
Nitab4.5_0010096g0010 Nicotiana tabacum HOM05D003428 ORTHO05D004131 2.2e-27 125.9 129 51.2
Sc17g0007210 Simmondsia chinensis HOM05D003428 ORTHO05D004131 2.2e-27 125.9 130 52.3
Manes.17G037100 Manihot esculenta HOM05D003428 ORTHO05D004131 1.9e-26 122.9 130 52.3
CSS0004273 Camellia sinensis var. sinensis HOM05D003428 ORTHO05D004131 2.5e-26 122.5 126 54.0
Sed0007172 Sechium edule HOM05D003428 ORTHO05D004131 3.2e-26 122.1 133 48.9
FAN25G3463 Fragaria x ananassa HOM05D003428 ORTHO05D004131 4.2e-26 121.7 136 51.5
HanXRQChr05g0129871 Helianthus annuus HOM05D003428 ORTHO05D004131 4.2e-26 121.7 131 48.1
arahy.Tifrunner.gnm1.ann1.FVAC65 Arachis hypogaea HOM05D003428 ORTHO05D004131 7.2e-26 120.9 131 50.4
arahy.Tifrunner.gnm1.ann1.IL23TX Arachis hypogaea HOM05D003428 ORTHO05D004131 7.2e-26 120.9 131 50.4
Medtr4g131850 Medicago truncatula HOM05D003428 ORTHO05D004131 7.2e-26 120.9 119 54.6
Solyc02g080340.3 Solanum lycopersicum HOM05D003428 ORTHO05D004131 9.4e-26 120.6 129 50.4
Duzib192G0582 Durio zibethinus HOM05D003428 ORTHO05D004131 1.6e-25 119.8 135 50.4
arahy.Tifrunner.gnm1.ann1.0P9V0B Arachis hypogaea HOM05D003428 ORTHO05D004131 2.1e-25 119.4 131 49.6
Lj2C271T3 Lonicera japonica HOM05D003428 ORTHO05D004131 2.1e-25 119.4 133 49.6
Manes.16G010100 Manihot esculenta HOM05D003428 ORTHO05D004131 2.1e-25 119.4 121 57.0
SalBow3G0064 Salvia bowleyana HOM05D003428 ORTHO05D004131 2.1e-25 119.4 129 50.4
SalBow3G1270 Salvia bowleyana HOM05D003428 ORTHO05D004131 2.1e-25 119.4 129 50.4
HanXRQChr15g0471381 Helianthus annuus HOM05D003428 ORTHO05D004131 6.1e-25 117.9 131 47.3
Lsat_1_v5_gn_7_17340 Lactuca sativa HOM05D003428 ORTHO05D004131 8.0e-25 117.5 136 44.9
CiPaw.10G069400 Carya illinoinensis HOM05D003428 ORTHO05D004131 1.8e-24 116.3 124 51.6
Haze_06774 Corylus avellana HOM05D003428 ORTHO05D004131 1.8e-24 116.3 116 57.8
MELO3C002470.2 Cucumis melo HOM05D003428 ORTHO05D004131 1.8e-24 116.3 133 48.1
RcHm_v2.0_Chr5g0003711 Rosa chinensis HOM05D003428 ORTHO05D004131 1.8e-24 116.3 136 50.7
Sabra04G0010400 Salix brachista HOM05D003428 ORTHO05D004131 1.8e-24 116.3 122 53.3
TWI38G0316 Tripterygium wilfordii HOM05D003428 ORTHO05D004131 4.0e-24 115.2 132 51.5
FvH4_3g02460 Fragaria vesca HOM05D003428 ORTHO05D004131 6.8e-24 114.4 137 49.6
SGA_v2.0_scaffold7G03871 Striga asiatica HOM05D003428 ORTHO05D004131 6.8e-24 114.4 129 48.8
Aa31LG2G8980 Aethionema arabicum HOM05D003428 ORTHO05D004131 1.2e-23 113.6 140 46.4
Hund21392 Selenicereus undatus HOM05D003428 ORTHO05D004131 1.2e-23 113.6 129 48.8
Ah.09g235070 Amaranthus hybridus HOM05D003428 ORTHO05D004131 2.6e-23 112.5 128 50.8
CARHR050470 Cardamine hirsuta HOM05D003428 ORTHO05D004131 9.8e-23 110.5 140 44.3
Gorai.009G177000 Gossypium raimondii HOM05D003428 ORTHO05D004131 1.3e-22 110.2 129 48.8
PGSC0003DMG400002079 Solanum tuberosum HOM05D003428 ORTHO05D004131 1.7e-22 109.8 129 47.3
Lj1A1228T72 Lonicera japonica HOM05D003428 ORTHO05D004131 2.2e-22 109.4 142 44.4
Sopen02g025040 Solanum pennellii HOM05D003428 ORTHO05D004131 2.8e-22 109.0 129 47.3
AT1G61850 Arabidopsis thaliana HOM05D003428 ORTHO05D004131 3.7e-22 108.6 140 44.3
Gohir.A10G014100 Gossypium hirsutum HOM05D003428 ORTHO05D004131 4.8e-22 108.2 141 44.7
Thhalv10023219m.g Eutrema salsugineum HOM05D003428 ORTHO05D004131 1.8e-21 106.3 140 45.0
Aa31LG1G3130 Aethionema arabicum HOM05D003428 ORTHO05D004131 2.4e-21 105.9 137 43.8
Sp2g02690 Schrenkiella parvula HOM05D003428 ORTHO05D004131 7.0e-21 104.4 140 45.7
Carub.0002s0319 Capsella rubella HOM05D003428 ORTHO05D004131 9.1e-21 104.0 138 43.5
ECA236G4773 Erigeron canadensis HOM05D003428 ORTHO05D004131 1.2e-20 103.6 123 46.3
AL2G14210 Arabidopsis lyrata HOM05D003428 ORTHO05D004131 2.0e-20 102.8 140 42.9
ECA248G3692 Erigeron canadensis HOM05D003428 ORTHO05D004131 2.0e-20 102.8 134 46.3
A09p16630 Brassica napus HOM05D003428 ORTHO05D004131 2.7e-20 102.4 140 43.6
Gohir.D10G014100 Gossypium hirsutum HOM05D003428 ORTHO05D004131 2.7e-20 102.4 143 42.0
Gorai.011G015900 Gossypium raimondii HOM05D003428 ORTHO05D004131 2.7e-20 102.4 143 42.0
BraA09t37300Z Brassica rapa HOM05D003428 ORTHO05D004131 3.5e-20 102.1 140 43.6
unitig_748.g7971 Utricularia gibba HOM05D003428 ORTHO05D004131 4.5e-20 101.7 130 47.7
Oeu063903.1 Olea europaea HOM05D003428 ORTHO05D004131 5.9e-20 101.3 130 45.4
BolC9t54926H Brassica oleracea HOM05D003428 ORTHO05D004131 1.3e-19 100.1 140 44.3
MSTRG.13149 Avicennia marina HOM05D003428 ORTHO05D004131 2.9e-19 99.0 128 46.1
BcaC04g22357 Brassica carinata HOM05D003428 ORTHO05D004131 2.9e-19 99.0 140 43.6
C09p20200 Brassica napus HOM05D003428 ORTHO05D004131 2.9e-19 99.0 140 43.6
THA.LOC104809511 Tarenaya hassleriana HOM05D003428 ORTHO05D004131 2.9e-19 99.0 144 43.1
BcaB07g31289 Brassica carinata HOM05D003428 ORTHO05D004131 8.6e-19 97.4 140 42.1
Dinv13872 Davidia involucrata HOM05D003428 ORTHO05D004131 8.6e-19 97.4 89 59.6
Gohir.A05G168700 Gossypium hirsutum HOM05D003428 ORTHO05D004131 8.6e-19 97.4 125 47.2
SMO367G0744 Selaginella moellendorffii HOM05D003428 ORTHO05D004131 1.1e-18 97.1 131 45.8
Lsat_1_v5_gn_1_124260 Lactuca sativa HOM05D003428 ORTHO05D004131 1.9e-18 96.3 141 42.6
Mapoly0096s0015 Marchantia polymorpha HOM05D003428 ORTHO05D004131 1.9e-18 96.3 132 38.6
Gohir.D05G171900 Gossypium hirsutum HOM05D003428 ORTHO05D004131 2.5e-18 95.9 119 47.9
HanXRQChr01g0003641 Helianthus annuus HOM05D003428 ORTHO05D004131 3.3e-18 95.5 135 43.7
Atru.chr10.2179 Acer truncatum HOM05D003428 ORTHO05D004131 1.0e-16 90.5 104 50.0
AagrBONN_evm.TU.Sc2ySwM_228.3176 Anthoceros agrestis HOM05D003428 ORTHO05D004131 1.4e-16 90.1 130 44.6
DCAR_004205 Daucus carota HOM05D003428 ORTHO05D004131 1.5e-15 86.7 133 39.1
Migut.M01297 Erythranthe guttata HOM05D003428 ORTHO05D004131 2.0e-15 86.3 130 41.5
SalBow3G0468 Salvia bowleyana HOM05D007552 ORTHO05D009397 1.3e-14 83.6 92 54.3


User provided reference genes

Program Settings