Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0752G141 Amborella trichopoda HOM05D006458 ORTHO05D008433 3.8e-78 294.7 139 100.0
DCAR_010044 Daucus carota HOM05D006458 ORTHO05D008433 2.0e-55 219.2 132 72.7
Manes.03G125000 Manihot esculenta HOM05D006458 ORTHO05D008433 1.0e-54 216.9 137 67.9
GSVIVG01037612001 Vitis vinifera HOM05D006458 ORTHO05D008433 2.9e-54 215.3 122 77.9
HanXRQChr11g0336301 Helianthus annuus HOM05D006458 ORTHO05D008433 3.8e-54 214.9 133 70.7
CiPaw.12G128400 Carya illinoinensis HOM05D006458 ORTHO05D008433 5.0e-54 214.5 137 70.8
CSS0025826 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 8.6e-54 213.8 130 72.3
CAN.G416.46 Capsicum annuum HOM05D006458 ORTHO05D008433 8.6e-54 213.8 122 74.6
Hma1.2p1_1271F.1_g271730 Hydrangea macrophylla HOM05D006458 ORTHO05D008433 8.6e-54 213.8 136 69.1
QL08p011516 Quercus lobata HOM05D006458 ORTHO05D008433 8.6e-54 213.8 132 72.0
Lj1A870G91 Lonicera japonica HOM05D006458 ORTHO05D008433 1.1e-53 213.4 130 72.3
Sabra16G0288000 Salix brachista HOM05D006458 ORTHO05D008433 1.1e-53 213.4 138 68.8
SGA_v2.0_scaffold7G03986 Striga asiatica HOM05D006458 ORTHO05D008433 1.5e-53 213.0 134 71.6
PGSC0003DMG400001097 Solanum tuberosum HOM05D006458 ORTHO05D008433 1.9e-53 212.6 122 74.6
CSS0046732 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 3.3e-53 211.8 122 75.4
Potri.011G137100 Populus trichocarpa HOM05D006458 ORTHO05D008433 4.3e-53 211.5 133 69.9
Sed0021211 Sechium edule HOM05D006458 ORTHO05D008433 4.3e-53 211.5 137 67.2
Solyc12g005150.2 Solanum lycopersicum HOM05D006458 ORTHO05D008433 4.3e-53 211.5 122 73.8
MSTRG.15157 Avicennia marina HOM05D006458 ORTHO05D008433 7.2e-53 210.7 137 68.6
Dinv22275 Davidia involucrata HOM05D006458 ORTHO05D008433 7.2e-53 210.7 137 67.9
Gohir.A01G078500 Gossypium hirsutum HOM05D006458 ORTHO05D008433 9.5e-53 210.3 128 71.1
TAR629G1817 Trochodendron aralioides HOM05D006458 ORTHO05D008433 9.5e-53 210.3 134 70.1
Cc05_g13560 Coffea canephora HOM05D006458 ORTHO05D008433 1.2e-52 209.9 122 74.6
Duzib170G0083 Durio zibethinus HOM05D006458 ORTHO05D008433 1.2e-52 209.9 130 70.0
Duzib170G1029 Durio zibethinus HOM05D006458 ORTHO05D008433 1.2e-52 209.9 130 70.0
Thhalv10014954m.g Eutrema salsugineum HOM05D006458 ORTHO05D008433 1.2e-52 209.9 133 71.4
Hma1.2p1_0673F.1_g201190 Hydrangea macrophylla HOM05D006458 ORTHO05D008433 1.2e-52 209.9 121 75.2
Cfa020375 Carpinus fangiana HOM05D006458 ORTHO05D008433 1.6e-52 209.5 132 72.0
Gorai.002G087500 Gossypium raimondii HOM05D006458 ORTHO05D008433 1.6e-52 209.5 128 71.1
MD03G1206100 Malus domestica HOM05D006458 ORTHO05D008433 1.6e-52 209.5 128 72.7
Thecc.07G043100 Theobroma cacao HOM05D006458 ORTHO05D008433 1.6e-52 209.5 132 68.9
Sopen12g001140 Solanum pennellii HOM05D006458 ORTHO05D008433 2.1e-52 209.1 122 73.0
Gorai.013G160500 Gossypium raimondii HOM05D006458 ORTHO05D008433 3.6e-52 208.4 127 70.9
Zm00001eb178010 Zea mays HOM05D006458 ORTHO05D008433 3.6e-52 208.4 130 71.5
CANSAT11G2101 Cannabis sativa HOM05D006458 ORTHO05D008433 4.7e-52 208.0 122 74.6
Gohir.A13G138900 Gossypium hirsutum HOM05D006458 ORTHO05D008433 4.7e-52 208.0 127 70.1
Gohir.D01G065600 Gossypium hirsutum HOM05D006458 ORTHO05D008433 4.7e-52 208.0 128 71.1
Carub.0008s1515 Capsella rubella HOM05D006458 ORTHO05D008433 6.1e-52 207.6 121 77.7
SalBow5G1944 Salvia bowleyana HOM05D006458 ORTHO05D008433 6.1e-52 207.6 137 66.4
Sp6g16820 Schrenkiella parvula HOM05D006458 ORTHO05D008433 6.1e-52 207.6 121 76.9
Dinv40738 Davidia involucrata HOM05D000653 ORTHO05D008581 8.0e-52 207.2 130 71.5
TAR626G0847 Trochodendron aralioides HOM05D006458 ORTHO05D008433 8.0e-52 207.2 137 70.1
Actinidia05107 Actinidia chinensis HOM05D006458 ORTHO05D008433 1.0e-51 206.8 124 72.6
Os02g0317800 Oryza sativa ssp. japonica HOM05D006458 ORTHO05D008433 1.0e-51 206.8 125 73.6
BcaC04g20291 Brassica carinata HOM05D006458 ORTHO05D008433 1.4e-51 206.5 136 71.3
MD11G1221600 Malus domestica HOM05D006458 ORTHO05D008433 1.4e-51 206.5 137 66.4
Nitab4.5_0000653g0030 Nicotiana tabacum HOM05D006458 ORTHO05D008433 1.4e-51 206.5 128 69.5
Nitab4.5_0000749g0130 Nicotiana tabacum HOM05D006458 ORTHO05D008433 1.4e-51 206.5 128 69.5
Aqoxy2G01543 Aquilegia oxysepala HOM05D006458 ORTHO05D008433 1.8e-51 206.1 141 65.2
Duzib170G0736 Durio zibethinus HOM05D006458 ORTHO05D008433 1.8e-51 206.1 130 68.5
FvH4_3g22360 Fragaria vesca HOM05D006458 ORTHO05D008433 1.8e-51 206.1 137 67.2
FAN11G3779 Fragaria x ananassa HOM05D006458 ORTHO05D008433 1.8e-51 206.1 137 67.2
AL8G30300 Arabidopsis lyrata HOM05D006458 ORTHO05D008433 2.3e-51 205.7 121 76.0
AT5G54855 Arabidopsis thaliana HOM05D006458 ORTHO05D008433 2.3e-51 205.7 121 76.0
BraA10t43315Z Brassica rapa HOM05D006458 ORTHO05D008433 2.3e-51 205.7 121 76.9
CARHR268190 Cardamine hirsuta HOM05D006458 ORTHO05D008433 2.3e-51 205.7 121 76.0
CDE05G1373 Ceratophyllum demersum HOM05D006458 ORTHO05D008433 2.3e-51 205.7 137 65.0
Phvul.006G040400 Phaseolus vulgaris HOM05D006458 ORTHO05D008433 2.3e-51 205.7 136 66.2
Migut.M01780 Erythranthe guttata HOM05D006458 ORTHO05D008433 3.0e-51 205.3 134 67.9
RcHm_v2.0_Chr5g0038891 Rosa chinensis HOM05D006458 ORTHO05D008433 3.0e-51 205.3 128 71.1
BcaB08g35852 Brassica carinata HOM05D006458 ORTHO05D008433 4.0e-51 204.9 121 76.0
C09p45410 Brassica napus HOM05D006458 ORTHO05D008433 4.0e-51 204.9 136 69.9
Lsat_1_v5_gn_7_109420 Lactuca sativa HOM05D006458 ORTHO05D008433 4.0e-51 204.9 124 71.8
Aa31LG3G10770 Aethionema arabicum HOM05D006458 ORTHO05D008433 5.2e-51 204.5 135 70.4
Haze_09655 Corylus avellana HOM05D000653 ORTHO05D008581 5.2e-51 204.5 125 74.4
Lalb_Chr15g0081001 Lupinus albus HOM05D006458 ORTHO05D008433 5.2e-51 204.5 137 65.7
Medtr3g051110 Medicago truncatula HOM05D006458 ORTHO05D008433 5.2e-51 204.5 137 67.2
COL.COLO4_09642 Corchorus olitorius HOM05D000451 ORTHO05D008433 6.8e-51 204.1 122 70.5
Peaxi162Scf00450g00732 Petunia axillaris HOM05D006458 ORTHO05D008433 6.8e-51 204.1 137 65.7
Prupe.4G210000 Prunus persica HOM05D006458 ORTHO05D008433 8.9e-51 203.8 128 68.8
A10p12190 Brassica napus HOM05D006458 ORTHO05D008433 1.2e-50 203.4 121 76.0
Psat5g192520 Pisum sativum HOM05D006458 ORTHO05D008433 1.5e-50 203.0 123 70.7
THA.LOC104817659 Tarenaya hassleriana HOM05D006458 ORTHO05D008433 1.5e-50 203.0 121 75.2
TWI39G1057 Tripterygium wilfordii HOM05D006458 ORTHO05D008433 1.5e-50 203.0 133 68.4
Ca_14717_v3 Cicer arietinum L. HOM05D006458 ORTHO05D008433 2.0e-50 202.6 121 72.7
Ciclev10009738m.g Citrus clementina HOM05D006458 ORTHO05D008433 2.0e-50 202.6 121 72.7
CsaV3_3G005240 Cucumis sativus L. HOM05D006458 ORTHO05D008433 2.0e-50 202.6 128 68.0
Glyma.18G099800 Glycine max HOM05D006458 ORTHO05D008433 2.0e-50 202.6 121 72.7
Lj6g0005932 Lotus japonicus HOM05D006458 ORTHO05D008433 2.0e-50 202.6 121 72.7
arahy.Tifrunner.gnm1.ann1.717SVK Arachis hypogaea HOM05D006458 ORTHO05D008433 2.6e-50 202.2 120 71.7
ClCG10G005510 Citrullus lanatus HOM05D006458 ORTHO05D008433 2.6e-50 202.2 128 68.8
Glyma.08G314400 Glycine max HOM05D006458 ORTHO05D008433 2.6e-50 202.2 121 71.9
Phvul.005G120100 Phaseolus vulgaris HOM05D006458 ORTHO05D008433 2.6e-50 202.2 121 71.1
VMungo0540G0475 Vigna mungo HOM05D006458 ORTHO05D008433 2.6e-50 202.2 121 71.1
arahy.Tifrunner.gnm1.ann1.JDXG8H Arachis hypogaea HOM05D006458 ORTHO05D008433 3.4e-50 201.8 137 65.7
CDE02G3449 Ceratophyllum demersum HOM05D006458 ORTHO05D008433 3.4e-50 201.8 137 65.7
Nitab4.5_0004336g0030 Nicotiana tabacum HOM05D006458 ORTHO05D008433 3.4e-50 201.8 132 66.7
FAN21G0544 Fragaria x ananassa HOM05D006458 ORTHO05D008433 4.4e-50 201.4 137 66.4
Nitab4.5_0001604g0080 Nicotiana tabacum HOM05D006458 ORTHO05D008433 5.7e-50 201.1 132 65.9
AUR62015736 Chenopodium quinoa HOM05D006458 ORTHO05D008433 9.8e-50 200.3 133 68.4
AUR62020475 Chenopodium quinoa HOM05D006458 ORTHO05D008433 9.8e-50 200.3 133 68.4
Gohir.D13G143700 Gossypium hirsutum HOM05D006458 ORTHO05D008433 9.8e-50 200.3 127 68.5
MBI18_g24806_MAGBIO Magnolia biondii HOM05D006458 ORTHO05D008433 1.3e-49 199.9 134 68.7
Cpa.g.sc97.30 Carica papaya HOM05D006458 ORTHO05D008433 4.9e-49 198.0 121 71.9
vmacro09731 Vaccinium macrocarpon HOM05D006458 ORTHO05D008433 8.3e-49 197.2 165 57.6
PSO541G1528 Papaver somniferum HOM05D006458 ORTHO05D008433 2.4e-48 195.7 140 63.6
Sc03g0008720 Simmondsia chinensis HOM05D006458 ORTHO05D008433 2.4e-48 195.7 121 71.1
EL10Ac4g07850 Beta vulgaris HOM05D006458 ORTHO05D008433 4.1e-48 194.9 121 71.9
PSO675G3423 Papaver somniferum HOM05D006458 ORTHO05D008433 9.2e-48 193.7 140 63.6
SalBow7G4274 Salvia bowleyana HOM05D006458 ORTHO05D008433 2.0e-47 192.6 164 55.5
PGR031G1917 Punica granatum HOM05D006458 ORTHO05D008433 2.7e-47 192.2 138 64.5
Hund02079 Selenicereus undatus HOM05D006458 ORTHO05D008433 3.5e-47 191.8 130 67.7
Ah.04g165770 Amaranthus hybridus HOM05D006458 ORTHO05D008433 3.9e-46 188.3 130 63.1
unitig_8.g4602 Utricularia gibba HOM05D006458 ORTHO05D008433 7.3e-45 184.1 137 62.0
HPP92_005293 Vanilla planifolia HOM05D006458 ORTHO05D008433 9.5e-45 183.7 123 67.5
RhsimUnG0251700 Rhododendron simsii HOM05D006458 ORTHO05D008433 1.2e-44 183.3 189 48.1
CSS0035522 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 2.3e-43 179.1 110 74.5
Nn1g03576 Nelumbo nucifera HOM05D006458 ORTHO05D008433 8.9e-43 177.2 112 68.8
ECA236G2465 Erigeron canadensis HOM05D000653 ORTHO05D008581 3.7e-41 171.8 125 64.0
Sabra11G0123000 Salix brachista HOM05D006458 ORTHO05D008433 3.7e-41 171.8 151 57.0
Eucgr.F03456 Eucalyptus grandis HOM05D006458 ORTHO05D008433 6.8e-35 151.0 93 72.0
MELO3C031911.2 Cucumis melo HOM05D006458 ORTHO05D008433 1.2e-34 150.2 99 66.7
Oeu062597.2 Olea europaea HOM05D006458 ORTHO05D008433 1.5e-34 149.8 92 70.7
SalBow7G3069 Salvia bowleyana HOM05D006458 ORTHO05D008433 2.0e-34 149.4 94 69.1
SEGI_29279 Sequoiadendron giganteum HOM05D006458 ORTHO05D008433 3.7e-33 145.2 80 82.5
Atru.chr2.3327 Acer truncatum HOM05D006458 ORTHO05D008433 1.0e-30 137.1 94 64.9
Nitab4.5_0000296g0120 Nicotiana tabacum HOM05D006458 ORTHO05D008433 9.5e-29 130.6 95 57.9
AUR62029374 Chenopodium quinoa HOM05D001363 ORTHO05D006255 7.1e-16 87.8 112 44.6
Atru.chr2.3388 Acer truncatum HOM05D006458 ORTHO05D008433 1.1e-13 80.5 52 69.2
FAN25G2931 Fragaria x ananassa HOM05D006458 ORTHO05D008433 7.6e-10 67.8 35 91.4
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 6.4e-09 64.7 43 58.1
TPR.G13209 Trifolium pratense HOM05D006458 ORTHO05D008433 1.6e-07 60.1 44 61.4
RcHm_v2.0_Chr5g0038871 Rosa chinensis HOM05D006458 ORTHO05D008433 2.7e-07 59.3 35 68.6
Nitab4.5_0000286g0120 Nicotiana tabacum HOM05D006458 ORTHO05D008433 1.0e-06 57.4 52 55.8


User provided reference genes

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