Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0752G130 Amborella trichopoda HOM05D005769 ORTHO05D006851 3.2e-99 365.2 193 100.0
Nn1g03582 Nelumbo nucifera HOM05D005769 ORTHO05D006851 9.2e-22 107.8 198 42.9
Duzib213G1024 Durio zibethinus HOM05D005769 ORTHO05D006851 1.3e-20 104.0 198 42.4
TAR626G0147 Trochodendron aralioides HOM05D005769 ORTHO05D006851 3.0e-20 102.8 200 40.5
Thecc.07G043800 Theobroma cacao HOM05D005769 ORTHO05D006851 3.9e-20 102.4 196 40.8
COL.COLO4_09632 Corchorus olitorius HOM05D005769 ORTHO05D006851 3.3e-19 99.4 197 38.6
FAN16G0333 Fragaria x ananassa HOM05D005769 ORTHO05D006851 4.3e-19 99.0 200 41.0
Duzib170G0312 Durio zibethinus HOM05D005769 ORTHO05D006851 5.6e-19 98.6 196 41.3
MD11G1222100 Malus domestica HOM05D005769 ORTHO05D006851 7.3e-19 98.2 197 41.1
Dinv40735 Davidia involucrata HOM05D005769 ORTHO05D006851 4.7e-18 95.5 193 38.9
Ciclev10010329m.g Citrus clementina HOM05D005769 ORTHO05D006851 6.2e-18 95.1 194 39.7
FAN21G0668 Fragaria x ananassa HOM05D005769 ORTHO05D006851 6.2e-18 95.1 200 39.5
FvH4_3g22210 Fragaria vesca HOM05D005769 ORTHO05D006851 1.8e-17 93.6 200 39.5
FAN11G0604 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.8e-17 93.6 200 39.5
VMungo0647G1996 Vigna mungo HOM05D005769 ORTHO05D006851 1.8e-17 93.6 203 36.9
FAN25G3736 Fragaria x ananassa HOM05D005769 ORTHO05D006851 2.3e-17 93.2 200 39.5
Manes.15G073700 Manihot esculenta HOM05D005769 ORTHO05D006851 4.0e-17 92.4 193 36.8
Haze_09647 Corylus avellana HOM05D005769 ORTHO05D006851 5.2e-17 92.0 193 38.3
Sabra16G0285900 Salix brachista HOM05D005769 ORTHO05D006851 8.9e-17 91.3 192 38.5
Manes.03G126700 Manihot esculenta HOM05D005769 ORTHO05D006851 1.2e-16 90.9 193 36.3
Phvul.008G265600 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 3.4e-16 89.4 200 36.0
QL08p011874 Quercus lobata HOM05D005769 ORTHO05D006851 3.4e-16 89.4 197 38.1
Cfa020385 Carpinus fangiana HOM05D005769 ORTHO05D006851 4.4e-16 89.0 192 38.0
Potri.001G421000 Populus trichocarpa HOM05D005769 ORTHO05D006851 4.4e-16 89.0 195 36.9
Gohir.D01G065000 Gossypium hirsutum HOM05D005769 ORTHO05D006851 5.8e-16 88.6 193 37.3
Gorai.002G086700 Gossypium raimondii HOM05D005769 ORTHO05D006851 5.8e-16 88.6 193 37.3
RcHm_v2.0_Chr5g0038281 Rosa chinensis HOM05D005769 ORTHO05D006851 7.5e-16 88.2 193 39.4
Prupe.4G209200 Prunus persica HOM05D005769 ORTHO05D006851 9.8e-16 87.8 194 40.7
arahy.Tifrunner.gnm1.ann1.B7V00M Arachis hypogaea HOM05D005769 ORTHO05D006851 1.3e-15 87.4 195 37.4
QL08p012043 Quercus lobata HOM05D005769 ORTHO05D006851 1.3e-15 87.4 197 37.6
Gohir.D05G366600 Gossypium hirsutum HOM05D005769 ORTHO05D006851 1.7e-15 87.0 196 37.2
arahy.Tifrunner.gnm1.ann1.B9FWIC Arachis hypogaea HOM05D005769 ORTHO05D006851 2.2e-15 86.7 195 36.9
Gorai.009G425000 Gossypium raimondii HOM05D005769 ORTHO05D006851 2.2e-15 86.7 196 37.2
TWI39G0743 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 2.2e-15 86.7 196 35.7
Gohir.A04G019100 Gossypium hirsutum HOM05D005769 ORTHO05D006851 3.7e-15 85.9 184 38.0
Atru.chr2.3278 Acer truncatum HOM05D005769 ORTHO05D006851 1.1e-14 84.3 192 37.5
Gohir.A01G077900 Gossypium hirsutum HOM05D005769 ORTHO05D006851 2.4e-14 83.2 194 37.1
Potri.011G136600 Populus trichocarpa HOM05D005769 ORTHO05D006851 2.4e-14 83.2 196 35.7
Rhsim04G0002100 Rhododendron simsii HOM05D005769 ORTHO05D006851 2.4e-14 83.2 201 36.3
Glyma.14G025400 Glycine max HOM05D005769 ORTHO05D006851 3.2e-14 82.8 188 35.1
Lj1P869T51 Lonicera japonica HOM05D005769 ORTHO05D006851 4.1e-14 82.4 193 36.3
Nitab4.5_0000749g0110 Nicotiana tabacum HOM05D005769 ORTHO05D006851 4.1e-14 82.4 195 36.4
TWI38G1097 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 7.1e-14 81.6 195 35.9
Rhsim04G0001000 Rhododendron simsii HOM05D005769 ORTHO05D006851 9.2e-14 81.3 201 35.3
CANSAT21G1553 Cannabis sativa HOM05D005769 ORTHO05D006851 1.2e-13 80.9 195 37.9
Glyma.02G289500 Glycine max HOM05D005769 ORTHO05D006851 1.6e-13 80.5 190 33.2
Hma1.2p1_1271F.1_g271830 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 1.6e-13 80.5 193 36.8
Hma1.2p1_1609F.1_g293426 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 1.6e-13 80.5 193 36.8
Nitab4.5_0000653g0070 Nicotiana tabacum HOM05D005769 ORTHO05D006851 1.6e-13 80.5 195 36.4
Cpa.g.sc97.35 Carica papaya HOM05D005769 ORTHO05D006851 2.7e-13 79.7 193 35.8
Lj4g0016834 Lotus japonicus HOM05D005769 ORTHO05D006851 7.8e-13 78.2 185 36.2
MBI18_g09843_MAGBIO Magnolia biondii HOM05D005769 ORTHO05D006851 7.8e-13 78.2 166 39.2
CiPaw.12G128000 Carya illinoinensis HOM05D005769 ORTHO05D006851 1.3e-12 77.4 193 35.2
Lalb_Chr04g0248581 Lupinus albus HOM05D005769 ORTHO05D006851 1.3e-12 77.4 192 34.4
Lj8E167T2 Lonicera japonica HOM05D005769 ORTHO05D006851 1.7e-12 77.0 193 33.7
LjContig00351g0007061 Lotus japonicus HOM05D005769 ORTHO05D006851 1.7e-12 77.0 197 35.5
THA.LOC104813420 Tarenaya hassleriana HOM05D005769 ORTHO05D006851 1.7e-12 77.0 192 34.9
CiPaw.11G187200 Carya illinoinensis HOM05D005769 ORTHO05D006851 2.3e-12 76.6 193 35.8
ClCG05G014450 Citrullus lanatus HOM05D005769 ORTHO05D006851 3.9e-12 75.9 193 34.2
Medtr5g092090 Medicago truncatula HOM05D005769 ORTHO05D006851 3.9e-12 75.9 201 34.3
PSO675G2145 Papaver somniferum HOM05D005769 ORTHO05D006851 3.9e-12 75.9 198 35.4
Oeu005460.1 Olea europaea HOM05D005769 ORTHO05D006851 5.1e-12 75.5 194 37.1
PGR031G3409 Punica granatum HOM05D005769 ORTHO05D006851 5.1e-12 75.5 194 35.6
Actinidia09713 Actinidia chinensis HOM05D005769 ORTHO05D006851 1.5e-11 73.9 177 36.7
Aqoxy1G03294 Aquilegia oxysepala HOM05D005769 ORTHO05D006851 3.3e-11 72.8 198 36.4
Sopen10g002310 Solanum pennellii HOM05D005769 ORTHO05D006851 5.6e-11 72.0 195 31.8
MSTRG.6907 Avicennia marina HOM05D005769 ORTHO05D006851 7.3e-11 71.6 193 32.6
PGSC0003DMG400014393 Solanum tuberosum HOM05D005769 ORTHO05D006851 9.5e-11 71.2 195 31.8
Solyc10g006360.2 Solanum lycopersicum HOM05D005769 ORTHO05D006851 1.2e-10 70.9 195 31.8
HPP92_014114 Vanilla planifolia HOM05D005769 ORTHO05D006851 1.2e-10 70.9 193 36.3
HanXRQChr11g0336271 Helianthus annuus HOM05D005769 ORTHO05D006851 1.6e-10 70.5 178 33.1
Nitab4.5_0013016g0010 Nicotiana tabacum HOM05D005769 ORTHO05D006851 2.8e-10 69.7 181 34.3
ECA236G2121 Erigeron canadensis HOM05D005769 ORTHO05D006851 3.6e-10 69.3 200 31.5
Ca_06306_v3 Cicer arietinum L. HOM05D005769 ORTHO05D006851 4.7e-10 68.9 201 30.8
PSO541G5959 Papaver somniferum HOM05D005769 ORTHO05D006851 6.2e-10 68.6 196 34.7
Nitab4.5_0000397g0340 Nicotiana tabacum HOM05D005769 ORTHO05D006851 8.1e-10 68.2 193 34.2
arahy.Tifrunner.gnm1.ann1.0M423A Arachis hypogaea HOM05D005769 ORTHO05D006851 1.4e-09 67.4 182 34.1
BcaC04g20292 Brassica carinata HOM05D005769 ORTHO05D006851 1.4e-09 67.4 194 32.5
C09p45400 Brassica napus HOM05D005769 ORTHO05D006851 1.4e-09 67.4 194 32.5
BolC9t57410H Brassica oleracea HOM05D005769 ORTHO05D006851 1.4e-09 67.4 194 32.5
BraA10t43314Z Brassica rapa HOM05D005769 ORTHO05D006851 1.4e-09 67.4 194 32.5
Sed0023999 Sechium edule HOM05D005769 ORTHO05D006851 2.3e-09 66.6 196 32.7
Sed0008399 Sechium edule HOM05D005769 ORTHO05D006851 3.1e-09 66.2 193 31.6
MELO3C018076.2 Cucumis melo HOM05D005769 ORTHO05D006851 4.0e-09 65.9 195 31.8
Cc05_g13510 Coffea canephora HOM05D005769 ORTHO05D006851 5.2e-09 65.5 192 33.3
CARHR268180 Cardamine hirsuta HOM05D005769 ORTHO05D006851 8.9e-09 64.7 192 32.3
Sp6g16810 Schrenkiella parvula HOM05D005769 ORTHO05D006851 8.9e-09 64.7 193 33.7
AL8G30290 Arabidopsis lyrata HOM05D005769 ORTHO05D006851 1.2e-08 64.3 215 31.2
Peaxi162Scf01097g00025 Petunia axillaris HOM05D005769 ORTHO05D006851 1.2e-08 64.3 192 32.3
VMungo0540G0361 Vigna mungo HOM05D005769 ORTHO05D006851 1.2e-08 64.3 180 35.6
CAN.G337.106 Capsicum annuum HOM05D005769 ORTHO05D006851 1.5e-08 63.9 195 34.9
CDE02G4799 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 1.5e-08 63.9 182 32.4
CsaV3_3G023280 Cucumis sativus L. HOM05D005769 ORTHO05D006851 1.5e-08 63.9 195 31.3
Lj6g0021335 Lotus japonicus HOM05D005769 ORTHO05D006851 1.5e-08 63.9 183 33.3
AT5G54850 Arabidopsis thaliana HOM05D005769 ORTHO05D006851 2.6e-08 63.2 215 30.7
Hma1.2p1_0328F.1_g126860 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 2.6e-08 63.2 191 30.9
BcaB08g35851 Brassica carinata HOM05D005769 ORTHO05D006851 3.4e-08 62.8 195 32.8
Sopen07g032470 Solanum pennellii HOM05D005769 ORTHO05D006851 4.4e-08 62.4 192 32.8
Solyc07g064320.3 Solanum lycopersicum HOM05D005769 ORTHO05D006851 5.8e-08 62.0 192 32.8
Hma1.2p1_1748F.1_g300680 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 7.6e-08 61.6 191 30.4
CSS0032413 Camellia sinensis var. sinensis HOM05D005769 ORTHO05D006851 9.9e-08 61.2 177 32.2
Migut.H01842 Erythranthe guttata HOM05D005769 ORTHO05D006851 9.9e-08 61.2 194 30.4
Migut.M01783 Erythranthe guttata HOM05D005769 ORTHO05D006851 1.3e-07 60.8 192 32.3
Thhalv10014809m.g Eutrema salsugineum HOM05D005769 ORTHO05D006851 1.7e-07 60.5 194 32.0
Zm00001eb322840 Zea mays HOM05D005769 ORTHO05D006851 2.9e-07 59.7 185 33.5
A10p12180 Brassica napus HOM05D005769 ORTHO05D006851 3.7e-07 59.3 222 28.8
unitig_0.g2389 Utricularia gibba HOM05D005769 ORTHO05D006851 3.7e-07 59.3 189 31.2
ECA234G1543 Erigeron canadensis HOM05D005769 ORTHO05D006851 4.9e-07 58.9 193 31.6
Peaxi162Scf00450g00084 Petunia axillaris HOM05D005769 ORTHO05D006851 4.9e-07 58.9 192 32.3
Aa31LG3G10760 Aethionema arabicum HOM05D005769 ORTHO05D006851 6.4e-07 58.5 192 30.7
PGSC0003DMG400001093 Solanum tuberosum HOM05D005769 ORTHO05D006851 6.4e-07 58.5 192 30.7
Carub.0008s1514 Capsella rubella HOM05D005769 ORTHO05D006851 8.4e-07 58.2 199 31.7
Glyma.18G101700 Glycine max HOM05D005769 ORTHO05D006851 8.4e-07 58.2 181 34.3
PGSC0003DMG400013920 Solanum tuberosum HOM05D005769 ORTHO05D006851 1.1e-06 57.8 192 32.8
Lsat_1_v5_gn_5_125321 Lactuca sativa HOM05D005769 ORTHO05D006851 1.9e-06 57.0 178 32.6
PSO832G0238 Papaver somniferum HOM05D005769 ORTHO05D006851 1.9e-06 57.0 196 30.1
Glyma.09G100100 Glycine max HOM05D005769 ORTHO05D006851 2.4e-06 56.6 185 34.1
Psat2g015240 Pisum sativum HOM05D005769 ORTHO05D006851 2.4e-06 56.6 202 29.2
Sc16g0006260 Simmondsia chinensis HOM05D005769 ORTHO05D006851 3.2e-06 56.2 228 29.8


User provided reference genes

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