Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0752G121 Amborella trichopoda HOM05D000101 ORTHO05D067629 2.2e-28 128.3 64 100.0
ATR0752G183 Amborella trichopoda HOM05D000101 ORTHO05D000089 2.2e-12 75.1 47 76.6
ATR0752G078 Amborella trichopoda HOM05D000101 ORTHO05D000089 8.6e-09 63.2 49 63.3
TAR627G1139 Trochodendron aralioides HOM05D000101 ORTHO05D000089 5.6e-08 60.5 52 57.7
Actinidia29913 Actinidia chinensis HOM05D000101 ORTHO05D000089 7.3e-08 60.1 46 50.0
TAR636G0948 Trochodendron aralioides HOM05D000101 ORTHO05D000089 1.2e-07 59.3 52 57.7
TAR627G0768 Trochodendron aralioides HOM05D000101 ORTHO05D000089 1.6e-07 58.9 52 55.8
ATR0232G001 Amborella trichopoda HOM05D000101 ORTHO05D000089 2.8e-07 58.2 47 61.7
ATR0752G069 Amborella trichopoda HOM05D000101 ORTHO05D000089 2.8e-07 58.2 43 62.8
ATR0752G065 Amborella trichopoda HOM05D000101 ORTHO05D000089 3.6e-07 57.8 43 62.8
ATR1089G055 Amborella trichopoda HOM05D000101 ORTHO05D000089 3.6e-07 57.8 47 59.6
GSVIVG01015167001 Vitis vinifera HOM05D000101 ORTHO05D000089 3.6e-07 57.8 43 53.5
EL10Ac8g19175 Beta vulgaris HOM05D000101 ORTHO05D000089 6.2e-07 57.0 43 60.5
CiPaw.11G103500 Carya illinoinensis HOM05D000101 ORTHO05D000089 6.2e-07 57.0 46 56.5
CARHR234850 Cardamine hirsuta HOM05D000101 ORTHO05D000089 1.1e-06 56.2 63 49.2
Gohir.D11G290800 Gossypium hirsutum HOM05D000092 ORTHO05D000089 1.1e-06 56.2 46 52.2
Gorai.007G314700 Gossypium raimondii HOM05D000101 ORTHO05D000089 1.1e-06 56.2 46 52.2
Haze_09597 Corylus avellana HOM05D000101 ORTHO05D000089 1.4e-06 55.8 46 56.5
QL08p013743 Quercus lobata HOM05D000101 ORTHO05D000089 1.4e-06 55.8 51 54.9
CiPaw.01G042600 Carya illinoinensis HOM05D000101 ORTHO05D000089 1.8e-06 55.5 46 56.5
Oeu007621.1 Olea europaea HOM05D000101 ORTHO05D000089 1.8e-06 55.5 52 51.9
QL12p007021 Quercus lobata HOM05D000101 ORTHO05D000089 1.8e-06 55.5 47 59.6
QL12p007076 Quercus lobata HOM05D000101 ORTHO05D000089 1.8e-06 55.5 47 59.6
ATR0752G136 Amborella trichopoda HOM05D000101 ORTHO05D000089 2.3e-06 55.1 47 53.2
BcaC06g32706 Brassica carinata HOM05D000101 ORTHO05D000089 2.3e-06 55.1 46 54.3
C07p55340 Brassica napus HOM05D000101 ORTHO05D000089 2.3e-06 55.1 46 54.3
BolC7t46016H Brassica oleracea HOM05D000101 ORTHO05D000089 2.3e-06 55.1 46 54.3
CiPaw.01G040900 Carya illinoinensis HOM05D000101 ORTHO05D000089 2.3e-06 55.1 46 56.5
QL08p013433 Quercus lobata HOM05D000092 ORTHO05D000089 2.3e-06 55.1 46 52.2
QL08p013754 Quercus lobata HOM05D000101 ORTHO05D000089 2.3e-06 55.1 46 52.2
QL12p007057 Quercus lobata HOM05D006624 ORTHO05D008209 2.3e-06 55.1 47 59.6
THA.LOC104799889 Tarenaya hassleriana HOM05D000101 ORTHO05D000089 2.3e-06 55.1 63 44.4
ATR0680G166 Amborella trichopoda HOM05D000101 ORTHO05D000089 3.1e-06 54.7 47 55.3
ATR0322G040 Amborella trichopoda HOM05D000101 ORTHO05D000089 4.0e-06 54.3 59 47.5
A03p57150 Brassica napus HOM05D000101 ORTHO05D000089 4.0e-06 54.3 46 52.2
BraA03t14782Z Brassica rapa HOM05D000101 ORTHO05D000089 4.0e-06 54.3 46 52.2
Cfa020431 Carpinus fangiana HOM05D000101 ORTHO05D000089 4.0e-06 54.3 46 54.3
Ciclev10027118m.g Citrus clementina HOM05D000101 ORTHO05D000089 5.2e-06 53.9 39 59.0
MBI04_g46761_MAGBIO Magnolia biondii HOM05D000092 ORTHO05D000042 5.2e-06 53.9 47 55.3
Oeu007623.1 Olea europaea HOM05D000101 ORTHO05D000089 5.2e-06 53.9 52 51.9
Oeu007624.1 Olea europaea HOM05D000101 ORTHO05D000089 5.2e-06 53.9 52 51.9
MBI01_g35899_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 6.8e-06 53.5 48 52.1
MBI18_g12151_MAGBIO Magnolia biondii HOM05D000092 ORTHO05D000089 6.8e-06 53.5 46 52.2
MBI18_g12155_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D012848 6.8e-06 53.5 46 52.2
MBI18_g17474_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D011739 6.8e-06 53.5 46 52.2
MBI18_g23510_MAGBIO Magnolia biondii HOM05D000092 ORTHO05D011739 6.8e-06 53.5 46 52.2
BcaC06g32707 Brassica carinata HOM05D000101 ORTHO05D000089 8.9e-06 53.1 46 52.2
AUR62029032 Chenopodium quinoa HOM05D000101 ORTHO05D000089 8.9e-06 53.1 43 48.8
AUR62033932 Chenopodium quinoa HOM05D000101 ORTHO05D000089 8.9e-06 53.1 43 48.8
Gohir.A11G280500 Gossypium hirsutum HOM05D000101 ORTHO05D000089 8.9e-06 53.1 43 51.2
QL07p010927 Quercus lobata HOM05D000092 ORTHO05D000042 8.9e-06 53.1 43 53.5


User provided reference genes

Program Settings