Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0752G070 Amborella trichopoda HOM05D000018 ORTHO05D067760 4.7e-42 174.1 86 100.0
ATR0752G153 Amborella trichopoda HOM05D000018 ORTHO05D001172 1.8e-17 92.4 50 86.0
ATR0752G135 Amborella trichopoda HOM05D000018 ORTHO05D015836 8.3e-15 83.6 80 53.8
ATR0733G036 Amborella trichopoda HOM05D000018 ORTHO05D001172 3.3e-11 71.6 85 41.2
Lj4g0024554 Lotus japonicus HOM05D000018 ORTHO05D001172 2.1e-10 68.9 76 46.1
FAN24G1251 Fragaria x ananassa HOM05D000018 ORTHO05D001172 2.8e-10 68.6 75 45.3
Lj2g0022677 Lotus japonicus HOM05D000018 ORTHO05D001172 3.6e-10 68.2 74 47.3
FAN15G1806 Fragaria x ananassa HOM05D000018 ORTHO05D001172 4.7e-10 67.8 75 44.0
FAN27G0846 Fragaria x ananassa HOM05D000018 ORTHO05D001172 4.7e-10 67.8 75 44.0
FvH4_2g07080 Fragaria vesca HOM05D000018 ORTHO05D001172 6.1e-10 67.4 75 44.0
ATR0752G165 Amborella trichopoda HOM05D000018 ORTHO05D001172 8.0e-10 67.0 85 41.2
FvH4_2g07081 Fragaria vesca HOM05D000018 ORTHO05D001172 8.0e-10 67.0 69 46.4
RcHm_v2.0_Chr6g0259521 Rosa chinensis HOM05D000018 ORTHO05D001172 1.0e-09 66.6 75 42.7
Psat6g096160 Pisum sativum HOM05D000018 ORTHO05D001172 1.4e-09 66.2 76 47.4
FAN27G1212 Fragaria x ananassa HOM05D000018 ORTHO05D001172 1.8e-09 65.9 69 44.9
Lalb_Chr05g0218941 Lupinus albus HOM05D000018 ORTHO05D001172 3.0e-09 65.1 69 46.4
FAN20G0931 Fragaria x ananassa HOM05D000018 ORTHO05D001172 4.0e-09 64.7 69 43.5
TPR.G18939 Trifolium pratense HOM05D000018 ORTHO05D001172 4.0e-09 64.7 71 45.1
Lj4g0024780 Lotus japonicus HOM05D000018 ORTHO05D001172 5.2e-09 64.3 69 47.8
Glyma.02G136200 Glycine max HOM05D000018 ORTHO05D001172 8.9e-09 63.5 76 42.1
Psat6g132000 Pisum sativum HOM05D000018 ORTHO05D001172 8.9e-09 63.5 76 46.1
RcHm_v2.0_Chr6g0259531 Rosa chinensis HOM05D000018 ORTHO05D001172 1.2e-08 63.2 68 44.1
Glyma.07G209100 Glycine max HOM05D000018 ORTHO05D001172 1.5e-08 62.8 73 42.5
Lj2g0018326 Lotus japonicus HOM05D000018 ORTHO05D001172 2.0e-08 62.4 72 47.2
VMungo0251G1634 Vigna mungo HOM05D000018 ORTHO05D001172 2.0e-08 62.4 73 43.8
Lalb_Chr05g0218951 Lupinus albus HOM05D000018 ORTHO05D001172 3.4e-08 61.6 77 45.5
SalBow6G6524 Salvia bowleyana HOM05D000018 ORTHO05D001172 3.4e-08 61.6 77 44.2
Medtr4g087090 Medicago truncatula HOM05D000018 ORTHO05D001172 4.4e-08 61.2 69 43.5
RcHm_v2.0_Chr6g0259551 Rosa chinensis HOM05D000018 ORTHO05D001172 4.4e-08 61.2 66 43.9
Lsat_1_v5_gn_5_117660 Lactuca sativa HOM05D000018 ORTHO05D001172 5.7e-08 60.8 75 42.7
Lj4g0023440 Lotus japonicus HOM05D000018 ORTHO05D001172 5.7e-08 60.8 73 38.4
VMungo0331G1792 Vigna mungo HOM05D000018 ORTHO05D001172 5.7e-08 60.8 73 45.2
Medtr1g034060 Medicago truncatula HOM05D000018 ORTHO05D001172 7.5e-08 60.5 72 43.1
Medtr1g034120 Medicago truncatula HOM05D000018 ORTHO05D001172 7.5e-08 60.5 72 43.1
Phvul.008G134100 Phaseolus vulgaris HOM05D000018 ORTHO05D001172 7.5e-08 60.5 67 44.8
Prupe.8G114800 Prunus persica HOM05D000018 ORTHO05D001172 7.5e-08 60.5 67 44.8
Prupe.8G115100 Prunus persica HOM05D000018 ORTHO05D001172 7.5e-08 60.5 67 44.8
arahy.Tifrunner.gnm1.ann1.5QZF0A Arachis hypogaea HOM05D000018 ORTHO05D001172 9.8e-08 60.1 73 45.2
Prupe.8G114300 Prunus persica HOM05D000018 ORTHO05D001172 9.8e-08 60.1 72 41.7
arahy.Tifrunner.gnm1.ann1.32CFE9 Arachis hypogaea HOM05D000018 ORTHO05D001172 1.3e-07 59.7 73 45.2
arahy.Tifrunner.gnm1.ann1.EYA3YN Arachis hypogaea HOM05D000018 ORTHO05D001172 1.3e-07 59.7 67 47.8
arahy.Tifrunner.gnm1.ann1.HYLU9Z Arachis hypogaea HOM05D000018 ORTHO05D001172 1.3e-07 59.7 67 47.8
Glyma.02G136000 Glycine max HOM05D000018 ORTHO05D001172 1.3e-07 59.7 76 40.8
VMungo0251G2624 Vigna mungo HOM05D000018 ORTHO05D001172 1.3e-07 59.7 76 40.8
CiPaw.05G056500 Carya illinoinensis HOM05D000018 ORTHO05D001172 1.7e-07 59.3 68 42.6
CiPaw.05G056900 Carya illinoinensis HOM05D000018 ORTHO05D001172 1.7e-07 59.3 68 42.6
ATR0733G099 Amborella trichopoda HOM05D000018 ORTHO05D001172 2.2e-07 58.9 78 34.6
TPR.G20435 Trifolium pratense HOM05D000018 ORTHO05D001172 2.2e-07 58.9 72 40.3
TAR625G1399 Trochodendron aralioides HOM05D000018 ORTHO05D001172 2.2e-07 58.9 68 45.6
ATR0733G123 Amborella trichopoda HOM05D000018 ORTHO05D001172 2.8e-07 58.5 78 34.6
Prupe.8G114600 Prunus persica HOM05D000018 ORTHO05D001172 2.8e-07 58.5 67 43.3
TAR381G0086 Trochodendron aralioides HOM05D000018 ORTHO05D001172 2.8e-07 58.5 76 43.4
ATR0863G001 Amborella trichopoda HOM05D000018 ORTHO05D001172 3.7e-07 58.2 84 34.5
Lj4g0013679 Lotus japonicus HOM05D000018 ORTHO05D001172 3.7e-07 58.2 69 44.9
Lsat_1_v5_gn_4_110260 Lactuca sativa HOM05D000018 ORTHO05D001172 4.9e-07 57.8 75 42.7
SEGI_41347 Sequoiadendron giganteum HOM05D000206 ORTHO05D002863 4.9e-07 57.8 59 42.4
arahy.Tifrunner.gnm1.ann1.3VV3WE Arachis hypogaea HOM05D000018 ORTHO05D001172 6.3e-07 57.4 72 40.3
Glyma.02G136300 Glycine max HOM05D000018 ORTHO05D001172 6.3e-07 57.4 73 41.1
Phvul.003G011900 Phaseolus vulgaris HOM05D000018 ORTHO05D001172 6.3e-07 57.4 79 36.7
Phvul.003G293200 Phaseolus vulgaris HOM05D000018 ORTHO05D001172 6.3e-07 57.4 67 44.8
Phvul.010G015900 Phaseolus vulgaris HOM05D000018 ORTHO05D001172 6.3e-07 57.4 76 40.8
ATR0733G238 Amborella trichopoda HOM05D000018 ORTHO05D001172 8.3e-07 57.0 78 33.3
CDE06G1104 Ceratophyllum demersum HOM05D000018 ORTHO05D001172 8.3e-07 57.0 82 39.0
Ca_18651_v3 Cicer arietinum L. HOM05D000018 ORTHO05D001172 8.3e-07 57.0 67 44.8
PGR142G1151 Punica granatum HOM05D000018 ORTHO05D001172 8.3e-07 57.0 72 43.1
QL11p038890 Quercus lobata HOM05D000018 ORTHO05D001172 8.3e-07 57.0 68 41.2
QL11p040202 Quercus lobata HOM05D000018 ORTHO05D001172 8.3e-07 57.0 68 41.2
Sed0024491 Sechium edule HOM05D000018 ORTHO05D001172 1.1e-06 56.6 68 44.1
arahy.Tifrunner.gnm1.ann1.YJV888 Arachis hypogaea HOM05D000018 ORTHO05D001766 1.4e-06 56.2 71 38.0
MSTRG.16770 Avicennia marina HOM05D000018 ORTHO05D001172 1.4e-06 56.2 72 41.7
Glyma.02G136100 Glycine max HOM05D000018 ORTHO05D001172 1.4e-06 56.2 73 39.7
QL11p038982 Quercus lobata HOM05D000018 ORTHO05D001172 1.4e-06 56.2 68 41.2
QL11p040257 Quercus lobata HOM05D000018 ORTHO05D001172 1.4e-06 56.2 68 41.2
SGA_v2.0_scaffold58G20601 Striga asiatica HOM05D000018 ORTHO05D001172 1.4e-06 56.2 73 38.4
Actinidia26845 Actinidia chinensis HOM05D000018 ORTHO05D001172 1.8e-06 55.8 68 42.6
Lj4g0027093 Lotus japonicus HOM05D000018 ORTHO05D001172 1.8e-06 55.8 76 40.8
Lalb_Chr05g0218961 Lupinus albus HOM05D000018 ORTHO05D001172 1.8e-06 55.8 75 40.0
MD05G1074000 Malus domestica HOM05D000018 ORTHO05D001172 1.8e-06 55.8 67 40.3
Medtr4g087140 Medicago truncatula HOM05D000018 ORTHO05D001172 1.8e-06 55.8 77 39.0
Prupe.8G114200 Prunus persica HOM05D000018 ORTHO05D001172 1.8e-06 55.8 67 38.8
SalBow2G2521 Salvia bowleyana HOM05D000018 ORTHO05D001172 1.8e-06 55.8 78 37.2
VMungo1383G3329 Vigna mungo HOM05D000018 ORTHO05D001172 1.8e-06 55.8 67 41.8
Atru.chr13.509 Acer truncatum HOM05D000018 ORTHO05D001172 2.4e-06 55.5 77 39.0
Atru.chr8.2608 Acer truncatum HOM05D000018 ORTHO05D001172 2.4e-06 55.5 77 39.0
Actinidia00468 Actinidia chinensis HOM05D000018 ORTHO05D001172 2.4e-06 55.5 70 42.9
ATR0402G001 Amborella trichopoda HOM05D000018 ORTHO05D001172 2.4e-06 55.5 85 31.8
MSTRG.20130 Avicennia marina HOM05D000018 ORTHO05D001172 2.4e-06 55.5 69 43.5
Os03g0618300 Oryza sativa ssp. japonica HOM05D000018 ORTHO05D001172 2.4e-06 55.5 70 38.6
Os08g0249900 Oryza sativa ssp. japonica HOM05D000018 ORTHO05D001172 2.4e-06 55.5 70 38.6
Peaxi162Scf00888g00113 Petunia axillaris HOM05D000018 ORTHO05D008577 2.4e-06 55.5 77 40.3
Psat7g120840 Pisum sativum HOM05D000018 ORTHO05D001172 2.4e-06 55.5 80 41.2
TAR625G0826 Trochodendron aralioides HOM05D000018 ORTHO05D001172 2.4e-06 55.5 72 41.7
Ca_18649_v3 Cicer arietinum L. HOM05D000018 ORTHO05D001172 3.1e-06 55.1 69 39.1
Ca_18650_v3 Cicer arietinum L. HOM05D000018 ORTHO05D001172 3.1e-06 55.1 69 39.1
Glyma.18G048300 Glycine max HOM05D000018 ORTHO05D008577 3.1e-06 55.1 77 37.7
Psat7g120800 Pisum sativum HOM05D000018 ORTHO05D001172 3.1e-06 55.1 72 41.7
arahy.Tifrunner.gnm1.ann1.0BPR43 Arachis hypogaea HOM05D000018 ORTHO05D001172 4.1e-06 54.7 76 39.5
arahy.Tifrunner.gnm1.ann1.YI9B6B Arachis hypogaea HOM05D000018 ORTHO05D001172 4.1e-06 54.7 72 38.9
Duzib052G0313 Durio zibethinus HOM05D000018 ORTHO05D001172 4.1e-06 54.7 68 38.2
Duzib132G0355 Durio zibethinus HOM05D000018 ORTHO05D001172 4.1e-06 54.7 68 38.2
Glyma.02G135900 Glycine max HOM05D000018 ORTHO05D001172 4.1e-06 54.7 71 38.0
Glyma.07G208900 Glycine max HOM05D000018 ORTHO05D001172 4.1e-06 54.7 73 39.7
Psat7g120760 Pisum sativum HOM05D000018 ORTHO05D001172 4.1e-06 54.7 72 41.7
Psat7g120920 Pisum sativum HOM05D000018 ORTHO05D001172 4.1e-06 54.7 73 39.7
HPP92_018729 Vanilla planifolia HOM05D000018 ORTHO05D001172 4.1e-06 54.7 83 38.6
arahy.Tifrunner.gnm1.ann1.B35K79 Arachis hypogaea HOM05D000018 ORTHO05D001172 5.4e-06 54.3 74 40.5
PGR142G1357 Punica granatum HOM05D000018 ORTHO05D001172 5.4e-06 54.3 69 43.5
QL11p038715 Quercus lobata HOM05D000018 ORTHO05D001172 5.4e-06 54.3 68 41.2
Rhsim11G0169700 Rhododendron simsii HOM05D000018 ORTHO05D001172 5.4e-06 54.3 68 42.6
Hund06194 Selenicereus undatus HOM05D000018 ORTHO05D001172 5.4e-06 54.3 79 38.0
TPR.G40373 Trifolium pratense HOM05D000018 ORTHO05D001172 5.4e-06 54.3 69 40.6
ATR0602G280 Amborella trichopoda HOM05D000018 ORTHO05D001172 7.0e-06 53.9 76 32.9
Duzib212G0743 Durio zibethinus HOM05D000118 ORTHO05D000098 7.0e-06 53.9 55 45.5
Manes.17G095300 Manihot esculenta HOM05D000018 ORTHO05D001172 7.0e-06 53.9 70 41.4
RcHm_v2.0_Chr6g0259511 Rosa chinensis HOM05D000018 ORTHO05D001172 7.0e-06 53.9 75 36.0
Aa31LG8G5830 Aethionema arabicum HOM05D000018 ORTHO05D001172 9.2e-06 53.5 67 40.3
arahy.Tifrunner.gnm1.ann1.IEA635 Arachis hypogaea HOM05D000018 ORTHO05D001172 9.2e-06 53.5 72 37.5
Haze_01915 Corylus avellana HOM05D000018 ORTHO05D001172 9.2e-06 53.5 68 39.7
CsaV3_7G008900 Cucumis sativus L. HOM05D000018 ORTHO05D001172 9.2e-06 53.5 74 40.5
Prupe.8G114400 Prunus persica HOM05D000018 ORTHO05D001172 9.2e-06 53.5 70 44.3
SalBow3G1389 Salvia bowleyana HOM05D000118 ORTHO05D000098 9.2e-06 53.5 53 41.5
THA.LOC104826076 Tarenaya hassleriana HOM05D000118 ORTHO05D000098 9.2e-06 53.5 71 40.8
TPR.G23506 Trifolium pratense HOM05D000018 ORTHO05D001172 9.2e-06 53.5 69 40.6
HPP92_018730 Vanilla planifolia HOM05D000018 ORTHO05D001172 9.2e-06 53.5 88 37.5


User provided reference genes

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