Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0752G058 Amborella trichopoda HOM05D003549 ORTHO05D004223 3.4e-23 111.3 79 100.0
GSVIVG01032498001 Vitis vinifera HOM05D003549 ORTHO05D004223 1.6e-12 75.9 74 70.3
QL02p076964 Quercus lobata HOM05D003549 ORTHO05D004223 1.1e-10 69.7 73 65.8
PSO017G2368 Papaver somniferum HOM05D003549 ORTHO05D004223 1.9e-10 68.9 72 65.3
TAR629G2438 Trochodendron aralioides HOM05D003549 ORTHO05D004223 1.9e-10 68.9 71 60.6
PSO478G4862 Papaver somniferum HOM05D003549 ORTHO05D004223 2.5e-10 68.6 72 65.3
Aqoxy3G00995 Aquilegia oxysepala HOM05D003549 ORTHO05D004223 3.3e-10 68.2 74 66.2
Nn8g39923 Nelumbo nucifera HOM05D003549 ORTHO05D004223 3.3e-10 68.2 72 62.5
TWI60G0590 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 3.3e-10 68.2 73 61.6
Cc04_g12860 Coffea canephora HOM05D003549 ORTHO05D004223 4.3e-10 67.8 80 63.8
Dinv33505 Davidia involucrata HOM05D003549 ORTHO05D004223 4.3e-10 67.8 74 59.5
PSO063G4497 Papaver somniferum HOM05D003549 ORTHO05D004223 5.6e-10 67.4 72 63.9
PSO832G2372 Papaver somniferum HOM05D003549 ORTHO05D004223 5.6e-10 67.4 72 66.7
Rhsim12G0163400 Rhododendron simsii HOM05D003549 ORTHO05D004223 5.6e-10 67.4 70 60.0
Ca_16195_v3 Cicer arietinum L. HOM05D003549 ORTHO05D004223 9.6e-10 66.6 72 66.7
Lj6g0023924 Lotus japonicus HOM05D003549 ORTHO05D004223 9.6e-10 66.6 72 66.7
Phvul.001G059000 Phaseolus vulgaris HOM05D003549 ORTHO05D004223 9.6e-10 66.6 72 66.7
CiPaw.11G028500 Carya illinoinensis HOM05D003549 ORTHO05D004223 2.1e-09 65.5 70 65.7
Lalb_Chr08g0236401 Lupinus albus HOM05D003549 ORTHO05D004223 2.1e-09 65.5 72 66.7
TWI81G0050 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 2.8e-09 65.1 72 63.9
TWI81G1057 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 2.8e-09 65.1 72 63.9
Lj1g0007079 Lotus japonicus HOM05D003549 ORTHO05D004223 3.7e-09 64.7 72 66.7
TWI15G0885 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 3.7e-09 64.7 72 63.9
Glyma.04G181200 Glycine max HOM05D003549 ORTHO05D004223 4.8e-09 64.3 72 66.7
Nitab4.5_0000852g0140 Nicotiana tabacum HOM05D003549 ORTHO05D004223 4.8e-09 64.3 80 61.2
Nitab4.5_0003857g0060 Nicotiana tabacum HOM05D003549 ORTHO05D004223 4.8e-09 64.3 80 61.2
Glyma.14G134200 Glycine max HOM05D003549 ORTHO05D004223 6.2e-09 63.9 72 65.3
SGA_v2.0_scaffold90G27958 Striga asiatica HOM05D000215 ORTHO05D003454 6.2e-09 63.9 80 56.2
CiPaw.12G025200 Carya illinoinensis HOM05D003549 ORTHO05D004223 8.1e-09 63.5 70 60.0
Peaxi162Scf00017g02716 Petunia axillaris HOM05D003549 ORTHO05D004223 8.1e-09 63.5 80 60.0
Psat5g114160 Pisum sativum HOM05D003549 ORTHO05D004223 8.1e-09 63.5 72 65.3
Dinv09155 Davidia involucrata HOM05D003549 ORTHO05D004223 1.1e-08 63.2 72 65.3
TAR371G0468 Trochodendron aralioides HOM05D003549 ORTHO05D004223 1.1e-08 63.2 71 64.8
RcHm_v2.0_Chr7g0193821 Rosa chinensis HOM05D003549 ORTHO05D004223 1.4e-08 62.8 78 61.5
Glyma.06G183700 Glycine max HOM05D003549 ORTHO05D004223 1.8e-08 62.4 72 65.3
Lsat_1_v5_gn_4_74920 Lactuca sativa HOM05D003549 ORTHO05D004223 1.8e-08 62.4 72 63.9
MBI15_g31119_MAGBIO Magnolia biondii HOM05D003549 ORTHO05D004223 2.4e-08 62.0 71 67.6
THA.LOC109116495 Tarenaya hassleriana HOM05D003549 ORTHO05D004223 2.4e-08 62.0 72 63.9
Ciclev10017382m.g Citrus clementina HOM05D003549 ORTHO05D004223 3.1e-08 61.6 74 64.9
Glyma.17G198800 Glycine max HOM05D003549 ORTHO05D004223 4.0e-08 61.2 68 64.7
Prupe.3G282400 Prunus persica HOM05D003549 ORTHO05D004223 4.0e-08 61.2 74 62.2
RcHm_v2.0_Chr7g0184521 Rosa chinensis HOM05D003549 ORTHO05D004223 5.3e-08 60.8 78 60.3
Haze_07495 Corylus avellana HOM05D003549 ORTHO05D004223 6.9e-08 60.5 72 62.5
Rhsim08G0170600 Rhododendron simsii HOM05D003549 ORTHO05D004223 9.0e-08 60.1 69 68.1
ECA232G0606 Erigeron canadensis HOM05D003549 ORTHO05D004223 1.2e-07 59.7 85 60.0
Mapoly0025s0126 Marchantia polymorpha HOM05D003549 ORTHO05D004223 1.2e-07 59.7 75 54.7
FAN02G2804 Fragaria x ananassa HOM05D003549 ORTHO05D004223 2.0e-07 58.9 72 59.7
FAN04G1549 Fragaria x ananassa HOM05D003549 ORTHO05D004223 2.0e-07 58.9 78 59.0
FAN05G0330 Fragaria x ananassa HOM05D003549 ORTHO05D004223 2.0e-07 58.9 72 59.7
FAN08G2999 Fragaria x ananassa HOM05D003549 ORTHO05D004223 2.0e-07 58.9 78 59.0
FAN09G2996 Fragaria x ananassa HOM05D003549 ORTHO05D004223 2.0e-07 58.9 72 59.7
FAN09G4496 Fragaria x ananassa HOM05D003549 ORTHO05D004223 2.0e-07 58.9 72 59.7
FAN13G2761 Fragaria x ananassa HOM05D003549 ORTHO05D004223 2.0e-07 58.9 78 59.0
Phvul.009G179900 Phaseolus vulgaris HOM05D003549 ORTHO05D004223 2.0e-07 58.9 72 61.1
SMO139G0002 Selaginella moellendorffii HOM05D003549 ORTHO05D004223 2.6e-07 58.5 77 55.8
Nn2g12408 Nelumbo nucifera HOM05D003549 ORTHO05D004223 3.4e-07 58.2 70 62.9
Oeu000929.1 Olea europaea HOM05D003549 ORTHO05D004223 3.4e-07 58.2 79 59.5
ClCG01G013030 Citrullus lanatus HOM05D003549 ORTHO05D004223 4.5e-07 57.8 72 62.5
CsaV3_1G008390 Cucumis sativus L. HOM05D003549 ORTHO05D004223 4.5e-07 57.8 72 62.5
BcaB03g15337 Brassica carinata HOM05D003549 ORTHO05D004223 5.8e-07 57.4 72 58.3
CAN.G781.29 Capsicum annuum HOM05D003549 ORTHO05D004223 5.8e-07 57.4 80 66.2
Duzib205G0517 Durio zibethinus HOM05D003549 ORTHO05D004223 5.8e-07 57.4 71 59.2
SMO145G0027 Selaginella moellendorffii HOM05D003549 ORTHO05D004223 5.8e-07 57.4 78 53.8
PGSC0003DMG400024492 Solanum tuberosum HOM05D003549 ORTHO05D004223 7.6e-07 57.0 80 57.5
FvH4_5g05150 Fragaria vesca HOM05D003549 ORTHO05D004223 9.9e-07 56.6 78 57.7
FAN18G4010 Fragaria x ananassa HOM05D003549 ORTHO05D004223 9.9e-07 56.6 78 57.7
Hma1.2p1_0176F.1_g077660 Hydrangea macrophylla HOM05D003549 ORTHO05D004223 9.9e-07 56.6 72 61.1
Sopen03g033240 Solanum pennellii HOM05D003549 ORTHO05D004223 9.9e-07 56.6 80 57.5
Aqoxy3G02997 Aquilegia oxysepala HOM05D003549 ORTHO05D004223 1.3e-06 56.2 75 69.3
Duzib084G0774 Durio zibethinus HOM05D003549 ORTHO05D004223 1.3e-06 56.2 80 58.8
Lalb_Chr11g0071151 Lupinus albus HOM05D003549 ORTHO05D004223 1.7e-06 55.8 73 75.3
TAR622G0024 Trochodendron aralioides HOM05D003549 ORTHO05D004223 1.7e-06 55.8 71 60.6
TAR622G1417 Trochodendron aralioides HOM05D003549 ORTHO05D004223 1.7e-06 55.8 71 60.6
BcaB05g23601 Brassica carinata HOM05D003549 ORTHO05D004223 2.2e-06 55.5 68 50.0
Ciclev10023184m.g Citrus clementina HOM05D003549 ORTHO05D004223 2.2e-06 55.5 72 61.1
MD06G1177000 Malus domestica HOM05D003549 ORTHO05D004223 2.2e-06 55.5 71 59.2
Solyc03g114170.3 Solanum lycopersicum HOM05D003549 ORTHO05D004223 2.2e-06 55.5 80 56.2
DCAR_021678 Daucus carota HOM05D003549 ORTHO05D004223 2.9e-06 55.1 69 60.9
FvH4_6g50520 Fragaria vesca HOM05D003549 ORTHO05D004223 2.9e-06 55.1 72 56.9
FAN14G1319 Fragaria x ananassa HOM05D003549 ORTHO05D004223 2.9e-06 55.1 72 56.9
Hma1.2p1_0802F.1_g220520 Hydrangea macrophylla HOM05D003549 ORTHO05D004223 2.9e-06 55.1 70 52.9
Sed0001837 Sechium edule HOM05D003549 ORTHO05D004223 2.9e-06 55.1 74 51.4
Thecc.03G009800 Theobroma cacao HOM05D003549 ORTHO05D004223 2.9e-06 55.1 80 60.0
A07p32720 Brassica napus HOM05D003549 ORTHO05D004223 3.8e-06 54.7 69 59.4
C06p38930 Brassica napus HOM05D003549 ORTHO05D004223 3.8e-06 54.7 69 59.4
BolC6t38985H Brassica oleracea HOM05D003549 ORTHO05D004223 3.8e-06 54.7 69 59.4
BraA07t30898Z Brassica rapa HOM05D003549 ORTHO05D004223 3.8e-06 54.7 69 59.4
RcHm_v2.0_Chr2g0170951 Rosa chinensis HOM05D003549 ORTHO05D004223 3.8e-06 54.7 72 55.6
SalBow2G1727 Salvia bowleyana HOM05D003549 ORTHO05D004223 4.9e-06 54.3 72 51.4
HanXRQChr16g0517241 Helianthus annuus HOM05D003549 ORTHO05D004223 6.4e-06 53.9 80 57.5
Actinidia19094 Actinidia chinensis HOM05D003549 ORTHO05D004223 8.4e-06 53.5 72 58.3
Prupe.5G175700 Prunus persica HOM05D003549 ORTHO05D004223 8.4e-06 53.5 71 60.6


User provided reference genes

Program Settings