Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0752G018 Amborella trichopoda HOM05D005165 ORTHO05D006361 0.0e+00 1472.6 754 100.0
MBI02_g22104_MAGBIO Magnolia biondii HOM05D005165 ORTHO05D006361 3.1e-190 669.5 712 51.8
Dinv13878 Davidia involucrata HOM05D005165 ORTHO05D006361 1.7e-188 663.7 667 54.3
Nn1g03565 Nelumbo nucifera HOM05D005165 ORTHO05D006361 6.4e-188 661.8 693 51.4
GSVIVG01002377001 Vitis vinifera HOM05D005165 ORTHO05D006361 2.5e-187 659.8 656 53.4
TAR627G0931 Trochodendron aralioides HOM05D005165 ORTHO05D006361 1.1e-184 651.0 667 54.1
Lj2C270G14 Lonicera japonica HOM05D005165 ORTHO05D006361 2.1e-183 646.7 692 50.9
Aqoxy1G03259 Aquilegia oxysepala HOM05D005165 ORTHO05D006361 1.8e-182 643.7 694 50.9
Migut.M01303 Erythranthe guttata HOM05D005165 ORTHO05D006361 1.9e-179 633.6 697 50.4
PSO541G6479 Papaver somniferum HOM05D005165 ORTHO05D006361 2.5e-179 633.3 729 49.7
MSTRG.15978 Avicennia marina HOM05D005165 ORTHO05D006361 1.2e-178 630.9 710 50.6
Cfa000241 Carpinus fangiana HOM05D005165 ORTHO05D006361 1.6e-178 630.6 703 49.2
PSO675G7058 Papaver somniferum HOM05D005165 ORTHO05D006361 7.9e-178 628.2 729 49.2
CSS0001066 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 1.3e-177 627.5 766 47.0
Oeu063907.1 Olea europaea HOM05D005165 ORTHO05D006361 1.8e-177 627.1 709 48.7
CiPaw.09G089900 Carya illinoinensis HOM05D005165 ORTHO05D006361 5.7e-176 622.1 710 48.9
CsaV3_1G010870 Cucumis sativus L. HOM05D005165 ORTHO05D006361 7.4e-176 621.7 716 47.9
MD10G1319300 Malus domestica HOM05D005165 ORTHO05D006361 1.8e-174 617.1 713 49.8
Prupe.4G023200 Prunus persica HOM05D005165 ORTHO05D006361 3.1e-174 616.3 708 50.1
COL.COLO4_31753 Corchorus olitorius HOM05D005165 ORTHO05D006361 2.6e-173 613.2 703 48.1
vmacro03694 Vaccinium macrocarpon HOM05D005165 ORTHO05D006361 2.6e-173 613.2 658 50.5
CANSAT56G1527 Cannabis sativa HOM05D005165 ORTHO05D006361 4.5e-173 612.5 670 51.3
ClCG03G004830 Citrullus lanatus HOM05D005165 ORTHO05D006361 4.5e-173 612.5 713 47.1
SGA_v2.0_scaffold4G01924 Striga asiatica HOM05D005165 ORTHO05D006361 4.5e-173 612.5 717 48.0
Gohir.D06G153700 Gossypium hirsutum HOM05D005165 ORTHO05D006361 1.0e-172 611.3 706 48.6
TWI63G0677 Tripterygium wilfordii HOM05D005165 ORTHO05D006361 1.0e-172 611.3 661 50.1
Gorai.010G179700 Gossypium raimondii HOM05D005165 ORTHO05D006361 1.7e-172 610.5 706 48.6
RcHm_v2.0_Chr5g0003561 Rosa chinensis HOM05D005165 ORTHO05D006361 1.7e-172 610.5 702 49.4
Psat4g007280 Pisum sativum HOM05D005165 ORTHO05D006361 2.9e-172 609.8 702 47.7
Cc09_g01850 Coffea canephora HOM05D005165 ORTHO05D006361 3.8e-172 609.4 727 46.8
Sed0027912 Sechium edule HOM05D005165 ORTHO05D006361 6.5e-172 608.6 647 50.4
Thecc.06G218200 Theobroma cacao HOM05D005165 ORTHO05D006361 2.5e-171 606.7 709 47.7
Hund23483 Selenicereus undatus HOM05D005165 ORTHO05D006361 3.2e-171 606.3 709 48.1
Manes.17G037700 Manihot esculenta HOM05D005165 ORTHO05D006361 2.1e-170 603.6 667 49.6
FvH4_3g02340 Fragaria vesca HOM05D005165 ORTHO05D006361 2.7e-170 603.2 689 48.2
Gohir.A06G147800 Gossypium hirsutum HOM05D005165 ORTHO05D006361 6.1e-170 602.1 642 50.3
Glyma.17G014900 Glycine max HOM05D005165 ORTHO05D006361 3.0e-169 599.7 662 49.1
QL05p073800 Quercus lobata HOM05D005165 ORTHO05D006361 8.8e-169 598.2 660 48.3
TPR.G37081 Trifolium pratense HOM05D005165 ORTHO05D006361 1.5e-168 597.4 669 49.0
Duzib235G1549 Durio zibethinus HOM05D005165 ORTHO05D006361 2.0e-168 597.0 702 47.3
Sabra04G0009600 Salix brachista HOM05D005165 ORTHO05D006361 5.7e-168 595.5 704 48.4
Phvul.003G077600 Phaseolus vulgaris HOM05D005165 ORTHO05D006361 7.4e-168 595.1 702 48.4
Ca_21091_v3 Cicer arietinum L. HOM05D005165 ORTHO05D006361 6.3e-167 592.0 699 46.4
Ca_30199_v3 Cicer arietinum L. HOM05D005165 ORTHO05D006361 6.3e-167 592.0 699 46.4
ECA236G1313 Erigeron canadensis HOM05D005165 ORTHO05D006361 6.3e-167 592.0 693 47.3
Lj4g0017916 Lotus japonicus HOM05D005165 ORTHO05D006361 6.3e-167 592.0 683 47.9
Ciclev10014034m.g Citrus clementina HOM05D005165 ORTHO05D006361 1.8e-166 590.5 643 49.3
Potri.004G017500 Populus trichocarpa HOM05D005165 ORTHO05D006361 4.1e-166 589.3 700 48.3
Medtr4g131940 Medicago truncatula HOM05D005165 ORTHO05D006361 2.0e-165 587.0 714 45.8
Lalb_Chr01g0014921 Lupinus albus HOM05D005165 ORTHO05D006361 2.6e-165 586.6 689 46.6
Solyc02g080390.2 Solanum lycopersicum HOM05D005165 ORTHO05D006361 3.4e-165 586.3 667 48.4
THA.LOC104813036 Tarenaya hassleriana HOM05D005165 ORTHO05D006361 3.4e-165 586.3 725 46.9
Gohir.D10G013600 Gossypium hirsutum HOM05D005165 ORTHO05D006361 4.5e-165 585.9 655 49.2
Rhsim13G0155600 Rhododendron simsii HOM05D005165 ORTHO05D006361 4.5e-165 585.9 680 47.9
Sopen02g025090 Solanum pennellii HOM05D005165 ORTHO05D006361 7.7e-165 585.1 668 48.5
Sc17g0007260 Simmondsia chinensis HOM05D005165 ORTHO05D006361 1.0e-164 584.7 716 47.3
HanXRQChr05g0129591 Helianthus annuus HOM05D005165 ORTHO05D006361 2.7e-162 576.6 702 46.3
PGR004G2872 Punica granatum HOM05D005165 ORTHO05D006361 1.0e-161 574.7 705 44.8
DCAR_004209 Daucus carota HOM05D005165 ORTHO05D006361 1.8e-161 573.9 716 45.8
Carub.0007s1958 Capsella rubella HOM05D005165 ORTHO05D006361 3.0e-161 573.2 723 45.8
Nitab4.5_0003254g0110 Nicotiana tabacum HOM05D005165 ORTHO05D006361 3.0e-161 573.2 658 48.3
A01p13150 Brassica napus HOM05D005165 ORTHO05D006361 5.1e-161 572.4 650 48.0
arahy.Tifrunner.gnm1.ann1.K6JFDD Arachis hypogaea HOM05D005165 ORTHO05D006361 1.5e-160 570.9 680 47.4
AUR62021974 Chenopodium quinoa HOM05D005165 ORTHO05D006361 1.5e-160 570.9 700 46.0
AT4G21820 Arabidopsis thaliana HOM05D005165 ORTHO05D006361 1.3e-159 567.8 728 45.3
AL7G32110 Arabidopsis lyrata HOM05D005165 ORTHO05D006361 1.7e-159 567.4 682 47.5
AUR62012682 Chenopodium quinoa HOM05D005165 ORTHO05D006361 4.8e-159 565.8 774 43.2
BcaNung02250 Brassica carinata HOM05D005165 ORTHO05D006361 8.2e-159 565.1 714 45.7
arahy.Tifrunner.gnm1.ann1.FU33AK Arachis hypogaea HOM05D005165 ORTHO05D006361 1.1e-158 564.7 724 44.9
BcaC09g51197 Brassica carinata HOM05D005165 ORTHO05D006361 1.8e-158 563.9 708 45.5
BraA01t01259Z Brassica rapa HOM05D005165 ORTHO05D006361 3.1e-158 563.1 706 46.2
Haze_06780 Corylus avellana HOM05D005165 ORTHO05D006361 4.1e-158 562.8 718 45.3
BolC1t01538H Brassica oleracea HOM05D005165 ORTHO05D006361 1.3e-156 557.8 700 45.6
CARHR228530 Cardamine hirsuta HOM05D005165 ORTHO05D006361 1.3e-156 557.8 703 45.7
Sp7g19990 Schrenkiella parvula HOM05D005165 ORTHO05D006361 2.2e-156 557.0 703 45.9
Lsat_1_v5_gn_7_17620 Lactuca sativa HOM05D005165 ORTHO05D006361 5.0e-156 555.8 663 47.7
arahy.Tifrunner.gnm1.ann1.QZ1TNI Arachis hypogaea HOM05D005165 ORTHO05D006361 3.2e-155 553.1 702 45.6
C01p15840 Brassica napus HOM05D005165 ORTHO05D006361 1.6e-154 550.8 734 43.9
Nitab4.5_0007482g0050 Nicotiana tabacum HOM05D005165 ORTHO05D006361 2.2e-151 540.4 673 45.6
Glyma.07G259400 Glycine max HOM05D005165 ORTHO05D006361 3.5e-149 533.1 612 48.0
Peaxi162Scf00262g00611 Petunia axillaris HOM05D005165 ORTHO05D006361 2.2e-148 530.4 637 47.7
MELO3C002466.2 Cucumis melo HOM05D005165 ORTHO05D006361 1.5e-147 527.7 552 52.4
Thhalv10024235m.g Eutrema salsugineum HOM05D005165 ORTHO05D006361 3.2e-147 526.6 723 43.4
VMungo1215G1456 Vigna mungo HOM05D005165 ORTHO05D000002 2.1e-146 523.9 594 50.0
HPP92_012319 Vanilla planifolia HOM05D005165 ORTHO05D006361 1.3e-143 514.6 647 44.8
CDE05G2160 Ceratophyllum demersum HOM05D005165 ORTHO05D006361 1.4e-142 511.1 654 45.0
EL10Ac8g20027 Beta vulgaris HOM05D005165 ORTHO05D006361 2.5e-139 500.4 728 42.0
unitig_748.g7100 Utricularia gibba HOM05D005165 ORTHO05D006361 3.2e-139 500.0 694 42.5
Cpa.g.sc198.36 Carica papaya HOM05D005165 ORTHO05D006361 1.3e-135 488.0 567 49.4
Aa31LG6G3830 Aethionema arabicum HOM05D005165 ORTHO05D006361 4.1e-134 483.0 607 46.3
FAN21G3214 Fragaria x ananassa HOM05D005165 ORTHO05D006361 2.0e-133 480.7 704 42.3
FAN25G1001 Fragaria x ananassa HOM05D005165 ORTHO05D006361 9.5e-131 471.9 702 42.3
CSS0020297 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 3.3e-123 446.8 814 37.1
Zm00001eb322760 Zea mays HOM05D005165 ORTHO05D006361 8.0e-122 442.2 648 40.7
Atru.chr10.2199 Acer truncatum HOM05D005165 ORTHO05D006361 8.9e-113 412.1 716 37.8
Mapoly0043s0047 Marchantia polymorpha HOM05D005165 ORTHO05D006361 6.0e-109 399.4 511 43.4
SEGI_37992 Sequoiadendron giganteum HOM05D005165 ORTHO05D006361 1.0e-108 398.7 491 42.8
Ah.09g235020 Amaranthus hybridus HOM05D005165 ORTHO05D006361 1.7e-108 397.9 693 37.8
Pp3c24_1350 Physcomitrium patens HOM05D005165 ORTHO05D006361 9.6e-99 365.5 649 34.5
HPP92_012397 Vanilla planifolia HOM05D005165 ORTHO05D006361 4.2e-94 350.1 647 35.5
Gorai.011G015400 Gossypium raimondii HOM05D005165 ORTHO05D006361 9.3e-94 349.0 387 51.2
QL05p073557 Quercus lobata HOM05D005165 ORTHO05D006361 8.7e-92 342.4 443 45.6
AagrBONN_evm.TU.Sc2ySwM_117.1637__1638 Anthoceros agrestis HOM05D005165 ORTHO05D006361 2.6e-88 330.9 679 33.1
CSS0012929 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 1.3e-87 328.6 671 34.0
SEGI_21682 Sequoiadendron giganteum HOM05D005165 ORTHO05D006361 2.1e-85 321.2 292 50.3
SMO200G0122 Selaginella moellendorffii HOM05D005165 ORTHO05D006361 4.6e-85 320.1 488 36.1
CSS0017164 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 1.3e-79 302.0 553 36.0
Eucgr.D01308 Eucalyptus grandis HOM05D005165 ORTHO05D006361 2.2e-79 301.2 389 42.4
Actinidia05522 Actinidia chinensis HOM05D005165 ORTHO05D006361 9.6e-67 259.2 480 35.4
CBR_g12408 Chara braunii HOM05D000019 ORTHO05D000048 9.4e-46 189.5 503 27.2
SEGI_19133 Sequoiadendron giganteum HOM05D005165 ORTHO05D006361 3.5e-40 171.0 240 38.8
SEGI_30095 Sequoiadendron giganteum HOM05D005165 ORTHO05D006361 3.5e-40 171.0 240 38.8
PRCOL_00000773 Prasinoderma coloniale HOM05D005165 ORTHO05D006361 8.5e-31 139.8 502 24.9
Gohir.A10G013700 Gossypium hirsutum HOM05D005165 ORTHO05D006361 1.1e-30 139.4 184 39.7
MCO03G113 Micromonas commoda HOM05D005165 ORTHO05D006361 5.4e-25 120.6 351 27.9
SHI14112 Sapria himalayana HOM05D005165 ORTHO05D006361 9.4e-22 109.8 102 52.0
Cre06.g281200 Chlamydomonas reinhardtii HOM05D005165 ORTHO05D006361 5.2e-20 104.0 239 33.1
SHI34979 Sapria himalayana HOM05D005165 ORTHO05D006361 9.2e-17 93.2 179 35.2
HanXRQChr07g0198521 Helianthus annuus HOM05D005165 ORTHO05D006361 4.5e-16 90.9 73 57.5
SEGI_29404 Sequoiadendron giganteum HOM05D005165 ORTHO05D006361 5.0e-15 87.4 197 28.9
SEGI_17063 Sequoiadendron giganteum HOM05D005165 ORTHO05D006361 6.6e-15 87.0 172 33.7
Cpa.g.sc198.37 Carica papaya HOM05D005165 ORTHO05D006361 4.3e-14 84.3 205 32.2
FAN25G2437 Fragaria x ananassa HOM05D005165 ORTHO05D006361 2.0e-11 75.5 79 53.2
Cfa022813 Carpinus fangiana HOM05D005165 ORTHO05D006361 3.2e-09 68.2 230 26.1
RcHm_v2.0_Chr1g0357401 Rosa chinensis HOM05D004672 ORTHO05D346782 2.7e-08 65.1 68 47.1
RcHm_v2.0_Chr6g0271351 Rosa chinensis HOM05D005165 ORTHO05D006361 1.7e-07 62.4 50 52.0
RcHm_v2.0_Chr5g0054711 Rosa chinensis HOM05D005165 ORTHO05D006361 1.1e-06 59.7 53 50.9


User provided reference genes

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