Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0751G270 Amborella trichopoda HOM05D003575 ORTHO05D003587 3.1e-237 824.7 409 100.0
TAR626G1391 Trochodendron aralioides HOM05D003575 ORTHO05D003587 1.1e-69 268.1 418 39.5
CDE04G2197 Ceratophyllum demersum HOM05D003575 ORTHO05D003587 4.6e-63 246.1 407 37.6
Nn1g03152 Nelumbo nucifera HOM05D003575 ORTHO05D003587 1.5e-61 241.1 418 36.1
Hma1.2p1_0599F.1_g187070 Hydrangea macrophylla HOM05D003575 ORTHO05D003587 3.9e-54 216.5 424 33.5
DCAR_019672 Daucus carota HOM05D003575 ORTHO05D003587 3.3e-53 213.4 382 35.1
Aqoxy5G03850 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 4.0e-51 206.5 396 34.1
CSS0035464 Camellia sinensis var. sinensis HOM05D003575 ORTHO05D003587 9.0e-51 205.3 382 34.3
Aqoxy5G03849 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 2.0e-50 204.1 380 34.2
Potri.002G216900 Populus trichocarpa HOM05D003575 ORTHO05D003587 3.4e-50 203.4 398 35.4
Ciclev10015675m.g Citrus clementina HOM05D003575 ORTHO05D003587 1.3e-49 201.4 381 37.0
Actinidia07857 Actinidia chinensis HOM05D003575 ORTHO05D003587 1.7e-49 201.1 416 31.7
Oeu029955.1 Olea europaea HOM05D003575 ORTHO05D003587 2.9e-49 200.3 409 34.0
CSS0012601 Camellia sinensis var. sinensis HOM05D003575 ORTHO05D003587 3.2e-48 196.8 395 33.2
MD17G1118100 Malus domestica HOM05D003575 ORTHO05D003587 6.0e-47 192.6 393 34.4
VMungo0647G0230 Vigna mungo HOM05D003575 ORTHO05D003587 6.0e-47 192.6 388 34.3
RcHm_v2.0_Chr7g0213061 Rosa chinensis HOM05D003575 ORTHO05D003587 7.9e-47 192.2 397 34.5
Glyma.13G186300 Glycine max HOM05D003575 ORTHO05D003587 1.3e-46 191.4 378 33.1
vmacro12070 Vaccinium macrocarpon HOM05D003575 ORTHO05D003587 3.0e-46 190.3 445 31.2
Rhsim06G0177900 Rhododendron simsii HOM05D003575 ORTHO05D003587 5.1e-46 189.5 418 32.3
PSO675G6399 Papaver somniferum HOM05D003575 ORTHO05D003587 1.5e-45 188.0 387 34.1
Prupe.3G196500 Prunus persica HOM05D003575 ORTHO05D003587 1.5e-45 188.0 388 33.8
Duzib133G0340 Durio zibethinus HOM05D003575 ORTHO05D003587 1.9e-45 187.6 394 32.0
PSO541G2609 Papaver somniferum HOM05D003575 ORTHO05D003587 1.9e-45 187.6 387 34.1
FAN18G1810 Fragaria x ananassa HOM05D003575 ORTHO05D003587 3.3e-45 186.8 403 33.0
PGSC0003DMG401004292 Solanum tuberosum HOM05D003575 ORTHO05D003587 5.6e-45 186.0 401 31.9
ClCG02G002950 Citrullus lanatus HOM05D003575 ORTHO05D003587 1.6e-44 184.5 415 30.8
FAN18G2204 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.6e-44 184.5 402 33.1
Thecc.01G197600 Theobroma cacao HOM05D003575 ORTHO05D003587 2.1e-44 184.1 418 29.9
Phvul.011G189400 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 2.8e-44 183.7 405 30.9
FAN21G1295 Fragaria x ananassa HOM05D003575 ORTHO05D003587 3.6e-44 183.3 409 31.3
Ca_16343_v3 Cicer arietinum L. HOM05D003575 ORTHO05D003587 1.4e-43 181.4 396 31.6
Solyc12g006060.2 Solanum lycopersicum HOM05D003575 ORTHO05D003587 1.4e-43 181.4 401 30.7
Gorai.007G165400 Gossypium raimondii HOM05D003575 ORTHO05D003587 1.8e-43 181.0 411 30.7
Sopen12g002030 Solanum pennellii HOM05D003575 ORTHO05D003587 1.8e-43 181.0 403 31.3
Migut.L00790 Erythranthe guttata HOM05D003575 ORTHO05D003587 2.4e-43 180.6 418 30.4
Sed0014111 Sechium edule HOM05D003575 ORTHO05D003587 4.0e-43 179.9 411 31.1
CsaV3_3G046180 Cucumis sativus L. HOM05D003575 ORTHO05D003587 5.3e-43 179.5 408 31.4
Peaxi162Scf00047g02035 Petunia axillaris HOM05D003575 ORTHO05D003587 5.3e-43 179.5 411 31.9
Sopen07g023850 Solanum pennellii HOM05D003575 ORTHO05D003587 1.2e-42 178.3 396 30.8
Sabra02G0168700 Salix brachista HOM05D003575 ORTHO05D003587 1.5e-42 177.9 412 31.8
Solyc07g045320.3 Solanum lycopersicum HOM05D003575 ORTHO05D003587 2.0e-42 177.6 403 30.8
arahy.Tifrunner.gnm1.ann1.04VE6P Arachis hypogaea HOM05D003575 ORTHO05D003587 2.6e-42 177.2 428 31.3
RcHm_v2.0_Chr5g0034301 Rosa chinensis HOM05D003575 ORTHO05D003587 2.6e-42 177.2 409 31.3
TPR.G22472 Trifolium pratense HOM05D003575 ORTHO05D003587 2.6e-42 177.2 414 30.7
arahy.Tifrunner.gnm1.ann1.F2CSMS Arachis hypogaea HOM05D003575 ORTHO05D003587 7.6e-42 175.6 431 31.1
arahy.Tifrunner.gnm1.ann1.RMR7W1 Arachis hypogaea HOM05D003575 ORTHO05D003587 7.6e-42 175.6 431 31.1
Manes.12G063604 Manihot esculenta HOM05D003575 ORTHO05D003587 2.2e-41 174.1 333 33.9
TWI18G0759 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 2.9e-41 173.7 402 30.1
Medtr6g042040 Medicago truncatula HOM05D003575 ORTHO05D003587 3.8e-41 173.3 388 31.2
Medtr6g042090 Medicago truncatula HOM05D003575 ORTHO05D003587 4.9e-41 172.9 392 31.4
SGA_v2.0_scaffold407G51066 Striga asiatica HOM05D003575 ORTHO05D003587 4.9e-41 172.9 435 31.3
Gohir.A11G148300 Gossypium hirsutum HOM05D003575 ORTHO05D003587 6.4e-41 172.6 411 30.2
FAN21G0497 Fragaria x ananassa HOM05D003575 ORTHO05D003587 8.4e-41 172.2 401 29.7
Gorai.001G098800 Gossypium raimondii HOM05D003575 ORTHO05D003587 1.1e-40 171.8 410 30.5
MBI15_g44598_MAGBIO Magnolia biondii HOM05D003575 ORTHO05D003587 1.1e-40 171.8 372 32.8
Psat5g104640 Pisum sativum HOM05D003575 ORTHO05D003587 1.9e-40 171.0 392 31.1
Gohir.D07G092200 Gossypium hirsutum HOM05D003575 ORTHO05D003587 3.2e-40 170.2 416 29.3
Lj6g0014157 Lotus japonicus HOM05D003575 ORTHO05D003587 4.2e-40 169.9 411 30.2
FvH4_3g20410 Fragaria vesca HOM05D003575 ORTHO05D003587 7.1e-40 169.1 407 30.7
FAN11G3075 Fragaria x ananassa HOM05D003575 ORTHO05D003587 7.1e-40 169.1 407 30.7
Ah.01g002520 Amaranthus hybridus HOM05D004224 ORTHO05D006437 9.3e-40 168.7 400 30.8
MSTRG.426 Avicennia marina HOM05D003575 ORTHO05D003587 9.3e-40 168.7 419 30.3
COL.COLO4_19638 Corchorus olitorius HOM05D003575 ORTHO05D003587 2.7e-39 167.2 418 29.9
CiPaw.04G197600 Carya illinoinensis HOM05D003575 ORTHO05D003587 3.5e-39 166.8 412 30.3
Lsat_1_v5_gn_7_97960 Lactuca sativa HOM05D003575 ORTHO05D003587 4.6e-39 166.4 392 29.6
CANSAT64G0731 Cannabis sativa HOM05D003575 ORTHO05D003587 1.0e-38 165.2 402 29.9
AUR62014996 Chenopodium quinoa HOM05D003575 ORTHO05D003587 1.0e-38 165.2 471 27.6
AUR62035876 Chenopodium quinoa HOM05D003575 ORTHO05D003587 1.0e-38 165.2 471 27.4
SHI10168 Sapria himalayana HOM05D003575 ORTHO05D003587 1.0e-38 165.2 435 30.1
HanXRQChr04g0126411 Helianthus annuus HOM05D003575 ORTHO05D003587 2.3e-38 164.1 379 31.1
ECA236G0897 Erigeron canadensis HOM05D003575 ORTHO05D003587 8.7e-38 162.2 397 29.0
FvH4_6g40510 Fragaria vesca HOM05D003575 ORTHO05D003587 1.9e-37 161.0 372 31.2
QL04p067739 Quercus lobata HOM05D003575 ORTHO05D003587 1.9e-37 161.0 405 32.3
CAN.G437.6 Capsicum annuum HOM05D003575 ORTHO05D003587 4.3e-37 159.8 352 31.0
FAN11G2840 Fragaria x ananassa HOM05D003575 ORTHO05D003587 5.6e-37 159.5 429 29.1
AUR62029125 Chenopodium quinoa HOM05D003575 ORTHO05D003587 7.4e-37 159.1 466 27.5
HanXRQChr04g0126401 Helianthus annuus HOM05D003575 ORTHO05D003587 9.6e-37 158.7 386 30.8
Medtr3g082720 Medicago truncatula HOM05D003575 ORTHO05D003587 9.6e-37 158.7 422 27.0
FAN16G3603 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.3e-36 158.3 460 27.8
CANSAT21G1971 Cannabis sativa HOM05D003575 ORTHO05D003587 2.1e-36 157.5 402 29.9
HanXRQChr16g0520571 Helianthus annuus HOM05D003575 ORTHO05D003587 2.8e-36 157.1 389 29.6
FAN25G1379 Fragaria x ananassa HOM05D003575 ORTHO05D003587 6.2e-36 156.0 394 31.0
FvH4_6g40530 Fragaria vesca HOM05D003575 ORTHO05D003587 1.8e-35 154.5 429 29.6
Nitab4.5_0009864g0030 Nicotiana tabacum HOM05D003575 ORTHO05D003587 6.9e-35 152.5 313 32.3
Peaxi162Scf00802g00028 Petunia axillaris HOM05D003575 ORTHO05D003587 1.2e-34 151.8 381 30.2
Gohir.D11G155100 Gossypium hirsutum HOM05D003575 ORTHO05D003587 2.0e-34 151.0 324 29.9
Lalb_Chr14g0362581 Lupinus albus HOM05D003575 ORTHO05D003587 2.0e-34 151.0 339 31.3
Haze_12614 Corylus avellana HOM05D003366 ORTHO05D004045 5.8e-34 149.4 392 30.1
Haze_12603 Corylus avellana HOM05D003366 ORTHO05D004045 1.0e-33 148.7 391 30.4
SalBow1G3222 Salvia bowleyana HOM05D003575 ORTHO05D003587 3.2e-32 143.7 333 30.0
MELO3C030470.2 Cucumis melo HOM05D003575 ORTHO05D003587 7.1e-32 142.5 406 28.8
FvH4_3g17720 Fragaria vesca HOM05D003575 ORTHO05D003587 6.0e-31 139.4 345 30.1
Nitab4.5_0004644g0050 Nicotiana tabacum HOM05D003575 ORTHO05D003587 6.0e-31 139.4 404 29.0
FAN14G2021 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.3e-30 138.3 351 28.8
EL10Ac9g22664 Beta vulgaris HOM05D003575 ORTHO05D003587 3.0e-30 137.1 436 27.3
PGSC0003DMG400017406 Solanum tuberosum HOM05D003575 ORTHO05D003587 3.0e-30 137.1 303 31.4
Sed0014379 Sechium edule HOM05D003575 ORTHO05D003587 6.7e-30 136.0 404 27.7
FvH4_5g23730 Fragaria vesca HOM05D003575 ORTHO05D003587 1.1e-29 135.2 385 30.1
TWI36G1168 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 1.5e-29 134.8 393 28.2
Lsat_1_v5_gn_7_97980 Lactuca sativa HOM05D000074 ORTHO05D001293 2.8e-28 130.6 330 28.2
Dinv21311 Davidia involucrata HOM05D003575 ORTHO05D003587 3.7e-28 130.2 183 38.8
Phvul.007G122046 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 3.7e-28 130.2 556 24.6
Nitab4.5_0000622g0080 Nicotiana tabacum HOM05D003575 ORTHO05D003587 3.1e-27 127.1 326 30.7
Prupe.3G196400 Prunus persica HOM05D003575 ORTHO05D003587 2.2e-25 120.9 175 40.6
MBI15_g06462_MAGBIO Magnolia biondii HOM05D003575 ORTHO05D003587 6.5e-25 119.4 290 31.7
Medtr3g082740 Medicago truncatula HOM05D003575 ORTHO05D003587 1.1e-24 118.6 279 30.8
Glyma.13G007400 Glycine max HOM05D003575 ORTHO05D003587 2.7e-23 114.0 369 27.6
RcHm_v2.0_Chr2g0155771 Rosa chinensis HOM05D003575 ORTHO05D003587 3.5e-23 113.6 153 41.2
Aqoxy4G01549 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 3.9e-22 110.2 171 37.4
VMungo1127G1165 Vigna mungo HOM05D003575 ORTHO05D003587 6.7e-22 109.4 191 33.0
FvH4_2g12920 Fragaria vesca HOM05D003575 ORTHO05D003587 1.5e-21 108.2 157 38.9
FAN24G1566 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.5e-21 108.2 157 38.9
FAN15G3143 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.9e-21 107.8 157 38.2
FAN20G0397 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.9e-21 107.8 157 38.2
ECA236G1196 Erigeron canadensis HOM05D003366 ORTHO05D004045 4.3e-21 106.7 379 28.8
PSO591G0010 Papaver somniferum HOM05D003575 ORTHO05D003587 9.7e-21 105.5 180 33.9
PSO832G1827 Papaver somniferum HOM05D003575 ORTHO05D003587 9.7e-21 105.5 175 35.4
PSO339G1364 Papaver somniferum HOM05D003575 ORTHO05D003587 4.8e-20 103.2 160 36.2
PSO339G4641 Papaver somniferum HOM05D003575 ORTHO05D003587 4.8e-20 103.2 160 36.2
RcHm_v2.0_Chr2g0133241 Rosa chinensis HOM05D003575 ORTHO05D003587 6.3e-20 102.8 173 34.1
PSO170G1005 Papaver somniferum HOM05D003575 ORTHO05D003587 1.1e-19 102.1 174 35.1
Carub.0007s1568 Capsella rubella HOM05D003575 ORTHO05D003587 1.8e-19 101.3 165 38.2
PSO832G3669 Papaver somniferum HOM05D003575 ORTHO05D003587 1.8e-19 101.3 167 35.3
TAR624G0842 Trochodendron aralioides HOM05D003575 ORTHO05D003587 3.1e-19 100.5 123 42.3
THA.LOC104812766 Tarenaya hassleriana HOM05D003575 ORTHO05D003587 4.1e-19 100.1 157 38.2
Gohir.A07G087300 Gossypium hirsutum HOM05D003575 ORTHO05D003587 6.9e-19 99.4 308 26.9
MD09G1128800 Malus domestica HOM05D003575 ORTHO05D003587 6.9e-19 99.4 156 38.5
PSO017G4852 Papaver somniferum HOM05D003575 ORTHO05D003587 9.0e-19 99.0 164 34.8
Cc00_g01040 Coffea canephora HOM05D003575 ORTHO05D003587 1.2e-18 98.6 186 36.0
PSO013G0383 Papaver somniferum HOM05D003575 ORTHO05D003587 1.5e-18 98.2 167 35.3
MBI15_g48140_MAGBIO Magnolia biondii HOM05D003575 ORTHO05D003587 2.0e-18 97.8 99 48.5
PSO013G0119 Papaver somniferum HOM05D003575 ORTHO05D003587 2.0e-18 97.8 167 34.1
PSO013G0348 Papaver somniferum HOM05D003575 ORTHO05D003587 2.0e-18 97.8 167 35.3
Sp7g23350 Schrenkiella parvula HOM05D003575 ORTHO05D003587 3.4e-18 97.1 156 37.2
Manes.12G092200 Manihot esculenta HOM05D003575 ORTHO05D003587 4.5e-18 96.7 157 36.3
TPR.G40538 Trifolium pratense HOM05D003575 ORTHO05D003587 4.5e-18 96.7 157 36.9
RcHm_v2.0_Chr2g0155791 Rosa chinensis HOM05D003575 ORTHO05D003587 7.7e-18 95.9 157 36.3
RcHm_v2.0_Chr2g0155781 Rosa chinensis HOM05D003575 ORTHO05D003587 1.7e-17 94.7 171 35.7
Thhalv10027138m.g Eutrema salsugineum HOM05D003575 ORTHO05D003587 2.2e-17 94.4 159 37.1
RcHm_v2.0_Chr2g0133311 Rosa chinensis HOM05D003575 ORTHO05D003587 2.2e-17 94.4 173 34.1
AT4G25330 Arabidopsis thaliana HOM05D003575 ORTHO05D003587 8.5e-17 92.4 158 39.2
FAN14G1012 Fragaria x ananassa HOM05D003575 ORTHO05D003587 8.5e-17 92.4 174 35.6
PSO832G1021 Papaver somniferum HOM05D003575 ORTHO05D003587 1.4e-16 91.7 167 32.9
AL7G27800 Arabidopsis lyrata HOM05D003575 ORTHO05D003587 3.2e-16 90.5 158 38.0
PGSC0003DMG400017442 Solanum tuberosum HOM05D003575 ORTHO05D003587 3.2e-16 90.5 208 30.8
PSO013G0020 Papaver somniferum HOM05D003575 ORTHO05D003587 7.2e-16 89.4 167 32.9
Hund01540 Selenicereus undatus HOM05D003575 ORTHO05D003587 4.6e-15 86.7 157 35.0
Aqoxy91s001 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 7.9e-15 85.9 119 39.5
BraA03t14662Z Brassica rapa HOM05D003575 ORTHO05D003587 1.4e-14 85.1 157 33.8
A03p55910 Brassica napus HOM05D003575 ORTHO05D003587 1.8e-14 84.7 157 33.8
Aqoxy1G03433 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 2.3e-14 84.3 143 36.4
PSO013G0266 Papaver somniferum HOM05D003575 ORTHO05D003587 2.3e-14 84.3 159 32.7
BolC7t45906H Brassica oleracea HOM05D003575 ORTHO05D003587 3.0e-14 84.0 156 32.1
C07p54200 Brassica napus HOM05D003575 ORTHO05D003587 3.9e-14 83.6 157 33.1
Mapoly0033s0032 Marchantia polymorpha HOM05D003575 ORTHO05D003587 6.7e-14 82.8 161 30.4
BcaC06g32820 Brassica carinata HOM05D003575 ORTHO05D003587 8.8e-14 82.4 174 31.6
FAN16G0569 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.1e-13 82.0 213 28.2
Dinv26593 Davidia involucrata HOM05D003575 ORTHO05D003587 5.7e-13 79.7 149 32.2
Mapoly0066s0003 Marchantia polymorpha HOM05D040683 ORTHO05D003587 1.3e-12 78.6 208 28.4
Pp3c24_6860 Physcomitrium patens HOM05D003575 ORTHO05D003587 2.2e-12 77.8 163 28.8
Mapoly0072s0063 Marchantia polymorpha HOM05D040683 ORTHO05D003587 4.8e-12 76.6 283 25.4
MD09G1129100 Malus domestica HOM05D003575 ORTHO05D003587 6.3e-12 76.3 101 41.6
FAN14G3058 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.4e-11 75.1 89 39.3
Lsat_1_v5_gn_9_62000 Lactuca sativa HOM05D000576 ORTHO05D000368 1.8e-11 74.7 175 29.7
FvH4_6g40520 Fragaria vesca HOM05D003575 ORTHO05D003587 2.4e-11 74.3 82 39.0
Oeu041110.1 Olea europaea HOM05D003575 ORTHO05D003587 6.9e-11 72.8 137 33.6
Lsat_1_v5_gn_8_78381 Lactuca sativa HOM05D003575 ORTHO05D003587 1.5e-10 71.6 126 31.0
Mapoly0021s0099 Marchantia polymorpha HOM05D003575 ORTHO05D003587 1.5e-10 71.6 147 30.6
Cc00_g01030 Coffea canephora HOM05D003575 ORTHO05D003587 2.0e-10 71.2 99 37.4
PSO339G5808 Papaver somniferum HOM05D003575 ORTHO05D003587 1.7e-09 68.2 143 26.6
FAN11G0216 Fragaria x ananassa HOM05D003575 ORTHO05D045963 6.5e-09 66.2 134 28.4
FvH4_3g20450 Fragaria vesca HOM05D039614 ORTHO05D045963 1.4e-08 65.1 80 37.5
ATR0751G016 Amborella trichopoda HOM05D003575 ORTHO05D003587 5.5e-08 63.2 59 50.8
SEGI_27817 Sequoiadendron giganteum HOM05D003575 ORTHO05D003587 5.5e-08 63.2 95 36.8
PSO339G3010 Papaver somniferum HOM05D003575 ORTHO05D003587 1.2e-07 62.0 101 37.6
Aqoxy4G02966 Aquilegia oxysepala HOM05D008555 ORTHO05D010760 1.6e-07 61.6 167 27.5
SEGI_27516 Sequoiadendron giganteum HOM05D003575 ORTHO05D003587 1.0e-06 58.9 108 31.5
Hund09315 Selenicereus undatus HOM05D008555 ORTHO05D010760 3.9e-06 57.0 153 24.8
Hund01541 Selenicereus undatus HOM05D009102 ORTHO05D003587 6.7e-06 56.2 132 28.8
Medtr3g082725 Medicago truncatula HOM05D003575 ORTHO05D003587 8.8e-06 55.8 98 34.7


User provided reference genes

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