Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0751G245 Amborella trichopoda HOM05D006836 ORTHO05D008691 6.4e-128 460.7 222 100.0
Actinidia09801 Actinidia chinensis HOM05D006836 ORTHO05D008691 4.3e-100 368.2 221 76.0
Nn1g07540 Nelumbo nucifera HOM05D006836 ORTHO05D008691 1.6e-99 366.3 224 77.7
Manes.13G060700 Manihot esculenta HOM05D006836 ORTHO05D008691 6.3e-99 364.4 221 73.8
Dinv21313 Davidia involucrata HOM05D006836 ORTHO05D008691 1.4e-98 363.2 221 74.7
Aqoxy1G03080 Aquilegia oxysepala HOM05D006836 ORTHO05D008691 2.4e-98 362.5 217 75.1
CSS0020520 Camellia sinensis var. sinensis HOM05D006836 ORTHO05D008691 2.4e-98 362.5 221 74.2
MBI14_g24036_MAGBIO Magnolia biondii HOM05D006836 ORTHO05D008691 3.1e-98 362.1 208 78.4
TAR629G0496 Trochodendron aralioides HOM05D006836 ORTHO05D008691 5.3e-98 361.3 213 77.0
vmacro12068 Vaccinium macrocarpon HOM05D006836 ORTHO05D008691 1.2e-97 360.1 223 73.5
QL04p067653 Quercus lobata HOM05D006836 ORTHO05D008691 2.6e-97 359.0 208 77.4
GSVIVG01030118001 Vitis vinifera HOM05D006836 ORTHO05D008691 7.7e-97 357.5 221 73.8
CiPaw.03G283000 Carya illinoinensis HOM05D006836 ORTHO05D008691 1.0e-96 357.1 211 74.4
Rhsim06G0178100 Rhododendron simsii HOM05D006836 ORTHO05D008691 2.9e-96 355.5 221 72.9
Lalb_Chr10g0094621 Lupinus albus HOM05D006836 ORTHO05D008691 6.5e-96 354.4 210 74.3
PSO675G1370 Papaver somniferum HOM05D006836 ORTHO05D008691 8.5e-96 354.0 212 74.5
PSO541G5262 Papaver somniferum HOM05D006836 ORTHO05D008691 1.9e-95 352.8 212 73.6
Thecc.01G198300 Theobroma cacao HOM05D006836 ORTHO05D008691 5.5e-95 351.3 221 72.4
Ciclev10015848m.g Citrus clementina HOM05D006836 ORTHO05D008691 9.4e-95 350.5 223 71.7
Duzib133G0147 Durio zibethinus HOM05D006836 ORTHO05D008691 1.2e-94 350.1 221 71.9
VMungo0647G0281 Vigna mungo HOM05D006836 ORTHO05D008691 1.2e-94 350.1 208 74.0
Phvul.L001691 Phaseolus vulgaris HOM05D006836 ORTHO05D008691 1.6e-94 349.7 217 72.4
Eucgr.K01397 Eucalyptus grandis HOM05D006836 ORTHO05D008691 2.7e-94 349.0 220 70.0
DCAR_012739 Daucus carota HOM05D006836 ORTHO05D008691 3.6e-94 348.6 221 71.5
Gohir.A07G192900 Gossypium hirsutum HOM05D006836 ORTHO05D008691 4.6e-94 348.2 220 71.8
Lj6g0007987 Lotus japonicus HOM05D006836 ORTHO05D008691 1.4e-93 346.7 217 72.4
Potri.014G169200 Populus trichocarpa HOM05D006836 ORTHO05D008691 1.8e-93 346.3 221 71.9
Gorai.001G223100 Gossypium raimondii HOM05D006836 ORTHO05D008691 2.3e-93 345.9 220 71.4
arahy.Tifrunner.gnm1.ann1.M09JG2 Arachis hypogaea HOM05D006836 ORTHO05D008691 3.9e-93 345.1 220 71.4
Solyc07g045300.4 Solanum lycopersicum HOM05D006836 ORTHO05D008691 5.1e-93 344.7 221 70.1
TPR.G16170 Trifolium pratense HOM05D006836 ORTHO05D008691 5.1e-93 344.7 219 71.7
Gohir.D07G199300 Gossypium hirsutum HOM05D006836 ORTHO05D008691 6.7e-93 344.4 220 70.9
Sopen07g023830 Solanum pennellii HOM05D006836 ORTHO05D008691 6.7e-93 344.4 221 69.7
Ah.01g002500 Amaranthus hybridus HOM05D006836 ORTHO05D008691 8.8e-93 344.0 222 73.4
arahy.Tifrunner.gnm1.ann1.GSTV0Y Arachis hypogaea HOM05D006836 ORTHO05D008691 8.8e-93 344.0 220 70.9
RcHm_v2.0_Chr2g0155731 Rosa chinensis HOM05D006836 ORTHO05D008691 8.8e-93 344.0 208 74.5
Cfa014210 Carpinus fangiana HOM05D006836 ORTHO05D008691 2.0e-92 342.8 221 70.1
Zm00001eb176810 Zea mays HOM05D006836 ORTHO05D008691 2.0e-92 342.8 220 71.4
CANSAT64G2876 Cannabis sativa HOM05D006836 ORTHO05D008691 2.5e-92 342.4 222 69.8
Glyma.13G010200 Glycine max HOM05D006836 ORTHO05D008691 2.5e-92 342.4 217 71.0
MD09G1129600 Malus domestica HOM05D006836 ORTHO05D008691 9.7e-92 340.5 220 68.2
PGSC0003DMG400017381 Solanum tuberosum HOM05D006836 ORTHO05D008691 1.3e-91 340.1 221 68.3
Medtr3g082680 Medicago truncatula HOM05D006836 ORTHO05D008691 1.7e-91 339.7 220 70.0
Nitab4.5_0004852g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 1.7e-91 339.7 221 67.9
Hund15463 Selenicereus undatus HOM05D006836 ORTHO05D008691 3.7e-91 338.6 222 70.3
AUR62014994 Chenopodium quinoa HOM05D006836 ORTHO05D008691 6.3e-91 337.8 222 71.2
Glyma.20G060000 Glycine max HOM05D006836 ORTHO05D008691 8.2e-91 337.4 217 71.0
SEGI_40154 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 1.4e-90 336.7 207 72.0
Oeu037218.2 Olea europaea HOM05D000879 ORTHO05D008691 3.1e-90 335.5 221 67.4
Psat5g104760 Pisum sativum HOM05D006836 ORTHO05D008691 1.2e-89 333.6 208 71.2
PGR031G1777 Punica granatum HOM05D006836 ORTHO05D008691 1.2e-89 333.6 221 69.2
Ca_16339_v3 Cicer arietinum L. HOM05D006836 ORTHO05D008691 1.5e-89 333.2 220 67.3
Os08g0345400 Oryza sativa ssp. japonica HOM05D006836 ORTHO05D008691 3.4e-89 332.0 210 71.4
AUR62029127 Chenopodium quinoa HOM05D006836 ORTHO05D008691 5.9e-89 331.3 225 70.2
TWI75G1319 Tripterygium wilfordii HOM05D006836 ORTHO05D008691 7.7e-89 330.9 209 72.7
THA.LOC104808842 Tarenaya hassleriana HOM05D006836 ORTHO05D008691 8.5e-88 327.4 210 70.0
ClCG02G009110 Citrullus lanatus HOM05D006836 ORTHO05D008691 4.2e-87 325.1 213 69.0
EL10Ac9g22661 Beta vulgaris HOM05D006836 ORTHO05D008691 9.4e-87 323.9 222 68.9
Haze_12601 Corylus avellana HOM05D006836 ORTHO05D008691 1.2e-86 323.6 263 60.8
Migut.M00056 Erythranthe guttata HOM05D006836 ORTHO05D008691 1.0e-85 320.5 208 69.7
MSTRG.14912 Avicennia marina HOM05D006836 ORTHO05D008691 1.4e-85 320.1 210 67.1
Sed0023251 Sechium edule HOM05D006836 ORTHO05D008691 3.9e-85 318.5 213 67.6
SGA_v2.0_scaffold73G24492 Striga asiatica HOM05D006836 ORTHO05D008691 3.9e-85 318.5 221 64.3
BcaB06g26781 Brassica carinata HOM05D006836 ORTHO05D008691 5.1e-85 318.2 218 66.1
Lj8A137G50 Lonicera japonica HOM05D006836 ORTHO05D008691 1.1e-84 317.0 208 69.2
BcaC06g35865 Brassica carinata HOM05D006836 ORTHO05D008691 2.0e-84 316.2 218 66.5
C07p10290 Brassica napus HOM05D006836 ORTHO05D008691 2.0e-84 316.2 218 66.5
BolC7t41479H Brassica oleracea HOM05D006836 ORTHO05D008691 2.0e-84 316.2 218 66.5
Carub.0003s2604 Capsella rubella HOM05D006836 ORTHO05D008691 2.6e-84 315.8 220 65.0
BraA07t28465Z Brassica rapa HOM05D006836 ORTHO05D008691 4.4e-84 315.1 218 66.1
CARHR102220 Cardamine hirsuta HOM05D006836 ORTHO05D008691 7.4e-84 314.3 211 66.8
Thhalv10002607m.g Eutrema salsugineum HOM05D006836 ORTHO05D008691 7.4e-84 314.3 217 65.9
A07p06710 Brassica napus HOM05D006836 ORTHO05D008691 2.2e-83 312.8 218 65.6
AL3G42030 Arabidopsis lyrata HOM05D006836 ORTHO05D008691 4.8e-83 311.6 219 65.8
Lsat_1_v5_gn_7_97361 Lactuca sativa HOM05D006836 ORTHO05D008691 4.8e-83 311.6 223 65.5
Sp3g23200 Schrenkiella parvula HOM05D006836 ORTHO05D008691 1.1e-82 310.5 211 66.4
HanXRQChr11g0329431 Helianthus annuus HOM05D006836 ORTHO05D008691 1.8e-82 309.7 222 63.5
Cc00_g01020 Coffea canephora HOM05D006836 ORTHO05D008691 9.1e-82 307.4 221 60.6
FvH4_6g40480 Fragaria vesca HOM05D006836 ORTHO05D008691 5.9e-81 304.7 178 75.3
ECA236G0162 Erigeron canadensis HOM05D006836 ORTHO05D008691 1.1e-79 300.4 201 68.2
Sabra14G0129000 Salix brachista HOM05D006836 ORTHO05D008691 4.2e-79 298.5 310 51.9
Nitab4.5_0005354g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 1.2e-78 297.0 221 63.8
CDE10G1136 Ceratophyllum demersum HOM05D006836 ORTHO05D008691 3.0e-77 292.4 174 74.7
FAN10G4054 Fragaria x ananassa HOM05D006836 ORTHO05D008691 8.8e-77 290.8 233 60.9
FAN14G0130 Fragaria x ananassa HOM05D006836 ORTHO05D008691 8.8e-77 290.8 233 60.9
COL.COLO4_19642 Corchorus olitorius HOM05D006836 ORTHO05D008691 1.1e-76 290.4 221 62.9
Peaxi162Scf00612g00142 Petunia axillaris HOM05D006836 ORTHO05D008691 1.7e-75 286.6 216 63.0
Pp3c23_16310 Physcomitrium patens HOM05D006836 ORTHO05D008691 6.1e-70 268.1 207 56.0
CsaV3_6G009720 Cucumis sativus L. HOM05D006836 ORTHO05D008691 3.0e-69 265.8 195 63.1
unitig_62.g23534 Utricularia gibba HOM05D000211 ORTHO05D002682 2.8e-67 259.2 193 62.7
AagrBONN_evm.TU.Sc2ySwM_117.1494 Anthoceros agrestis HOM05D006836 ORTHO05D008691 5.9e-65 251.5 205 55.6
Mapoly0098s0007 Marchantia polymorpha HOM05D006836 ORTHO05D008691 1.0e-61 240.7 207 56.0
MD07G1016400 Malus domestica HOM05D006836 ORTHO05D008691 1.8e-61 240.0 229 53.7
MD17G1118400 Malus domestica HOM05D006836 ORTHO05D008691 1.8e-61 240.0 229 53.7
SMO270G0068 Selaginella moellendorffii HOM05D006836 ORTHO05D008691 1.2e-60 237.3 205 52.7
Sc21g0000470 Simmondsia chinensis HOM05D006836 ORTHO05D008691 3.4e-60 235.7 157 69.4
Cpa.g.sc136.39 Carica papaya HOM05D006836 ORTHO05D008691 5.7e-60 235.0 211 55.0
AT2G04360 Arabidopsis thaliana HOM05D006836 ORTHO05D008691 6.6e-56 221.5 166 62.7
MELO3C025942.2 Cucumis melo HOM05D006836 ORTHO05D008691 1.1e-55 220.7 155 64.5
FAN02G3194 Fragaria x ananassa HOM05D006836 ORTHO05D008691 6.8e-53 211.5 117 77.8
Aa31sc202G50 Aethionema arabicum HOM05D006836 ORTHO05D008691 5.7e-52 208.4 179 57.0
Prupe.3G195700 Prunus persica HOM05D006836 ORTHO05D008691 4.1e-50 202.2 117 74.4
Cre05.g234750 Chlamydomonas reinhardtii HOM05D006836 ORTHO05D008691 5.0e-48 195.3 215 46.5
Haze_12612 Corylus avellana HOM05D006836 ORTHO05D008691 5.0e-48 195.3 148 63.5
CBR_g3513 Chara braunii HOM05D006836 ORTHO05D000407 1.8e-37 160.2 184 44.0
FAN05G5431 Fragaria x ananassa HOM05D006836 ORTHO05D008691 1.9e-34 150.2 100 69.0
FAN09G0369 Fragaria x ananassa HOM05D006836 ORTHO05D008691 3.5e-33 146.0 100 68.0
HPP92_003031 Vanilla planifolia HOM05D006836 ORTHO05D008691 1.5e-31 140.6 98 64.3
HPP92_003030 Vanilla planifolia HOM05D006836 ORTHO05D008691 2.3e-24 116.7 76 65.8
SEGI_21977 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 3.3e-23 112.8 61 83.6
PRCOL_00003549 Prasinoderma coloniale HOM05D006836 ORTHO05D008691 8.9e-21 104.8 167 39.5
arahy.Tifrunner.gnm1.ann1.FY93PX Arachis hypogaea HOM05D006836 ORTHO05D000230 2.4e-13 80.1 46 73.9
MCO08G347 Micromonas commoda HOM05D006836 ORTHO05D008691 2.4e-10 70.1 178 30.9
Haze_12595 Corylus avellana HOM05D006836 ORTHO05D008691 7.1e-10 68.6 35 82.9


User provided reference genes

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