Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0751G181 Amborella trichopoda HOM05D006765 ORTHO05D008554 1.0e-210 736.5 379 100.0
MBI15_g19869_MAGBIO Magnolia biondii HOM05D006765 ORTHO05D008554 4.7e-62 242.7 349 43.0
TAR629G2312 Trochodendron aralioides HOM05D006765 ORTHO05D008554 6.3e-59 232.3 377 41.1
Nn1g07719 Nelumbo nucifera HOM05D006765 ORTHO05D008554 2.0e-52 210.7 388 38.4
GSVIVG01014751001 Vitis vinifera HOM05D006765 ORTHO05D008554 2.6e-52 210.3 381 36.5
CSS0046328 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 7.5e-52 208.8 383 40.2
CSS0016155 Camellia sinensis var. sinensis HOM05D006765 ORTHO05D008554 2.2e-51 207.2 383 39.4
Gohir.A04G004500 Gossypium hirsutum HOM05D006765 ORTHO05D008554 2.9e-51 206.8 385 36.6
Rhsim04G0010100 Rhododendron simsii HOM05D006765 ORTHO05D008554 5.4e-50 202.6 245 47.3
Ciclev10008671m.g Citrus clementina HOM05D006765 ORTHO05D008554 2.0e-49 200.7 168 57.7
Dinv40889 Davidia involucrata HOM05D006765 ORTHO05D008554 6.0e-49 199.1 382 36.9
Gorai.009G452100 Gossypium raimondii HOM05D006765 ORTHO05D008554 1.0e-48 198.4 385 36.4
Potri.001G467400 Populus trichocarpa HOM05D006765 ORTHO05D008554 1.7e-48 197.6 199 50.8
Actinidia03654 Actinidia chinensis HOM05D006765 ORTHO05D008554 3.0e-48 196.8 195 54.4
Nitab4.5_0003130g0010 Nicotiana tabacum HOM05D006765 ORTHO05D008554 6.6e-48 195.7 193 53.9
Prupe.6G029100 Prunus persica HOM05D006765 ORTHO05D008554 1.1e-47 194.9 206 51.9
CAN.G623.40 Capsicum annuum HOM05D006765 ORTHO05D008554 1.5e-47 194.5 201 51.2
Hma1.2p1_1094F.1_g256340 Hydrangea macrophylla HOM05D006765 ORTHO05D008554 1.5e-47 194.5 168 56.5
Nitab4.5_0000152g0290 Nicotiana tabacum HOM05D006765 ORTHO05D008554 1.5e-47 194.5 170 57.6
Sopen07g034060 Solanum pennellii HOM05D006765 ORTHO05D008554 1.9e-47 194.1 171 56.7
Duzib213G0912 Durio zibethinus HOM05D006765 ORTHO05D008554 3.3e-47 193.4 383 36.3
Manes.01G004100 Manihot esculenta HOM05D006765 ORTHO05D008554 4.3e-47 193.0 248 45.2
Gohir.D05G385400 Gossypium hirsutum HOM05D006765 ORTHO05D008554 5.6e-47 192.6 385 35.8
Sabra16G0317200 Salix brachista HOM05D006765 ORTHO05D008554 7.3e-47 192.2 200 48.5
PGSC0003DMG400022157 Solanum tuberosum HOM05D006765 ORTHO05D008554 7.3e-47 192.2 205 49.8
COL.COLO4_07747 Corchorus olitorius HOM05D006765 ORTHO05D008554 9.5e-47 191.8 385 34.5
Lj1A895T73 Lonicera japonica HOM05D006765 ORTHO05D008554 1.2e-46 191.4 215 47.4
Solyc07g065870.3 Solanum lycopersicum HOM05D006765 ORTHO05D008554 1.2e-46 191.4 205 49.3
BcaC09g48297 Brassica carinata HOM05D006765 ORTHO05D008554 2.1e-46 190.7 178 51.7
Cpa.g.sc12.101 Carica papaya HOM05D006765 ORTHO05D008554 3.6e-46 189.9 232 47.8
Peaxi162Scf00232g00025 Petunia axillaris HOM05D006765 ORTHO05D008554 3.6e-46 189.9 206 50.0
QL08p002606 Quercus lobata HOM05D006765 ORTHO05D008554 4.7e-46 189.5 206 48.1
TWI38G1422 Tripterygium wilfordii HOM05D006765 ORTHO05D008554 4.7e-46 189.5 367 34.9
FAN25G2031 Fragaria x ananassa HOM05D006765 ORTHO05D008554 6.2e-46 189.1 212 51.4
FAN11G3685 Fragaria x ananassa HOM05D006765 ORTHO05D008554 1.1e-45 188.3 212 51.4
FAN16G0764 Fragaria x ananassa HOM05D006765 ORTHO05D008554 1.4e-45 188.0 212 50.9
Eucgr.F02021 Eucalyptus grandis HOM05D006765 ORTHO05D008554 1.8e-45 187.6 380 35.0
BolC1t05128H Brassica oleracea HOM05D006765 ORTHO05D008554 2.3e-45 187.2 209 46.4
FvH4_3g42180 Fragaria vesca HOM05D006765 ORTHO05D008554 5.2e-45 186.0 212 50.9
Aqoxy2G01345 Aquilegia oxysepala HOM05D006765 ORTHO05D008554 6.8e-45 185.7 203 50.7
Sed0017860 Sechium edule HOM05D006765 ORTHO05D008554 6.8e-45 185.7 209 48.3
Zm00001eb433160 Zea mays HOM05D006765 ORTHO05D008554 6.8e-45 185.7 198 46.5
Cc05_g15360 Coffea canephora HOM05D006765 ORTHO05D008554 1.2e-44 184.9 215 47.0
PGR083G0751 Punica granatum HOM05D006765 ORTHO05D008554 1.5e-44 184.5 168 54.2
Sp3g11440 Schrenkiella parvula HOM05D006765 ORTHO05D008554 1.5e-44 184.5 167 51.5
BcaB04g21007 Brassica carinata HOM05D006765 ORTHO05D008554 2.0e-44 184.1 205 45.9
C01p51810 Brassica napus HOM05D006765 ORTHO05D008554 2.0e-44 184.1 382 34.6
CiPaw.11G207500 Carya illinoinensis HOM05D006765 ORTHO05D008554 2.0e-44 184.1 224 44.2
Lsat_1_v5_gn_7_114860 Lactuca sativa HOM05D006765 ORTHO05D008554 2.0e-44 184.1 204 49.5
Oeu005464.1 Olea europaea HOM05D006765 ORTHO05D008554 2.0e-44 184.1 168 56.0
RcHm_v2.0_Chr5g0075451 Rosa chinensis HOM05D006765 ORTHO05D008554 2.0e-44 184.1 295 42.4
Phvul.008G281600 Phaseolus vulgaris HOM05D006765 ORTHO05D008554 4.4e-44 183.0 184 50.0
CsaV3_7G021520 Cucumis sativus L. HOM05D006765 ORTHO05D008554 5.8e-44 182.6 231 45.9
Os04g0667900 Oryza sativa ssp. japonica HOM05D006765 ORTHO05D008554 7.5e-44 182.2 206 46.6
THA.LOC104801913 Tarenaya hassleriana HOM05D006765 ORTHO05D008554 7.5e-44 182.2 169 52.7
AT3G13226 Arabidopsis thaliana HOM05D006765 ORTHO05D008554 9.8e-44 181.8 171 51.5
Sc03g0011660 Simmondsia chinensis HOM05D006765 ORTHO05D008554 9.8e-44 181.8 207 46.4
A01p40290 Brassica napus HOM05D006765 ORTHO05D008554 1.3e-43 181.4 369 35.8
AL3G25050 Arabidopsis lyrata HOM05D006765 ORTHO05D008554 1.7e-43 181.0 172 51.2
PSO541G0333 Papaver somniferum HOM05D006765 ORTHO05D008554 1.7e-43 181.0 195 48.2
PSO675G8178 Papaver somniferum HOM05D006765 ORTHO05D008554 1.7e-43 181.0 195 48.7
BraA01t04065Z Brassica rapa HOM05D006765 ORTHO05D008554 2.9e-43 180.3 349 36.1
CARHR087860 Cardamine hirsuta HOM05D006765 ORTHO05D008554 2.9e-43 180.3 167 53.3
Cfa021898 Carpinus fangiana HOM05D006765 ORTHO05D008554 3.7e-43 179.9 221 45.7
Carub.0003s1262 Capsella rubella HOM05D006765 ORTHO05D008554 4.9e-43 179.5 224 44.6
Aa31LG8G470 Aethionema arabicum HOM05D006765 ORTHO05D008554 8.3e-43 178.7 193 48.2
Thhalv10020892m.g Eutrema salsugineum HOM05D006765 ORTHO05D008554 8.3e-43 178.7 166 51.8
Glyma.02G302700 Glycine max HOM05D006765 ORTHO05D008554 8.3e-43 178.7 173 52.0
MELO3C013197.2 Cucumis melo HOM05D006765 ORTHO05D008554 1.9e-42 177.6 208 47.6
SGA_v2.0_scaffold168G38579 Striga asiatica HOM05D006765 ORTHO05D008554 2.4e-42 177.2 203 46.8
LjContig00081g0022778 Lotus japonicus HOM05D006765 ORTHO05D008554 3.2e-42 176.8 171 53.2
ClCG09G021580 Citrullus lanatus HOM05D006765 ORTHO05D008554 5.4e-42 176.0 250 43.6
FAN21G2411 Fragaria x ananassa HOM05D006765 ORTHO05D008554 7.0e-42 175.6 217 47.9
Hund01854 Selenicereus undatus HOM05D006765 ORTHO05D008554 7.0e-42 175.6 165 51.5
Migut.M01623 Erythranthe guttata HOM05D006765 ORTHO05D008554 1.2e-41 174.9 208 45.7
Lalb_Chr04g0247731 Lupinus albus HOM05D006765 ORTHO05D008554 2.7e-41 173.7 231 43.7
Ah.08g214160 Amaranthus hybridus HOM05D006765 ORTHO05D008554 3.5e-41 173.3 205 46.3
HanXRQChr15g0488021 Helianthus annuus HOM05D006765 ORTHO05D008554 6.0e-41 172.6 221 45.2
arahy.Tifrunner.gnm1.ann1.C7HE0M Arachis hypogaea HOM05D006765 ORTHO05D008554 1.7e-40 171.0 201 45.3
ECA236G1773 Erigeron canadensis HOM05D006765 ORTHO05D008554 2.3e-40 170.6 241 39.8
CANSAT11G0072 Cannabis sativa HOM05D006765 ORTHO05D008554 8.6e-40 168.7 365 34.8
AUR62017157 Chenopodium quinoa HOM05D006765 ORTHO05D008554 8.6e-40 168.7 375 34.1
Glyma.14G011300 Glycine max HOM05D006765 ORTHO05D008554 8.6e-40 168.7 173 50.3
DCAR_013261 Daucus carota HOM05D006765 ORTHO05D008554 1.1e-39 168.3 204 46.6
Ca_06420_v3 Cicer arietinum L. HOM05D006765 ORTHO05D008554 9.5e-39 165.2 234 41.5
Psat2g006160 Pisum sativum HOM05D006765 ORTHO05D008554 2.8e-38 163.7 232 39.2
TPR.G1253 Trifolium pratense HOM05D006765 ORTHO05D008554 6.2e-38 162.5 206 45.1
Prupe.6G082900 Prunus persica HOM05D006765 ORTHO05D008554 1.8e-37 161.0 150 54.7
Haze_09874 Corylus avellana HOM05D006765 ORTHO05D008554 2.3e-37 160.6 393 33.1
SalBow8G5524 Salvia bowleyana HOM05D006765 ORTHO05D008554 3.1e-37 160.2 213 46.0
Medtr5g096560 Medicago truncatula HOM05D006765 ORTHO05D008554 4.0e-37 159.8 206 42.2
EL10Ac4g07518 Beta vulgaris HOM05D006765 ORTHO05D008554 1.5e-36 157.9 376 33.5
vmacro09619 Vaccinium macrocarpon HOM05D006765 ORTHO05D008554 1.5e-36 157.9 288 36.8
AUR62035647 Chenopodium quinoa HOM05D006765 ORTHO05D008554 3.4e-36 156.8 344 34.6
MD03G1037000 Malus domestica HOM05D006765 ORTHO05D008554 3.4e-36 156.8 119 62.2
arahy.Tifrunner.gnm1.ann1.8KGR77 Arachis hypogaea HOM05D006765 ORTHO05D008554 2.2e-35 154.1 239 38.9
CDE04G0216 Ceratophyllum demersum HOM05D006765 ORTHO05D008554 1.4e-34 151.4 190 43.7
VMungo0647G1474 Vigna mungo HOM05D006765 ORTHO05D008554 9.2e-34 148.7 243 36.6
SEGI_27535 Sequoiadendron giganteum HOM05D006765 ORTHO05D008554 2.1e-30 137.5 124 47.6
Pp3c19_18350 Physcomitrium patens HOM05D006765 ORTHO05D008554 1.2e-28 131.7 209 38.8
Prupe.6G029900 Prunus persica HOM05D006765 ORTHO05D008554 2.6e-28 130.6 226 38.5
SMO115G0196 Selaginella moellendorffii HOM05D006765 ORTHO05D008554 1.4e-26 124.8 206 34.0
Mapoly0047s0103 Marchantia polymorpha HOM05D006765 ORTHO05D008554 7.3e-23 112.5 173 32.9
Sed0007098 Sechium edule HOM05D006765 ORTHO05D008554 3.0e-16 90.5 160 38.8
Psat2g006040 Pisum sativum HOM05D006765 ORTHO05D008554 6.6e-16 89.4 88 48.9
Thecc.07G007200 Theobroma cacao HOM05D006765 ORTHO05D008554 1.9e-15 87.8 79 54.4
Zm00001eb350950 Zea mays HOM05D004726 ORTHO05D005986 4.5e-12 76.6 59 52.5
MCO16G170 Micromonas commoda HOM05D006765 ORTHO05D008554 1.3e-11 75.1 205 27.8


User provided reference genes

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