Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0751G158 Amborella trichopoda HOM05D007471 ORTHO05D009481 1.8e-131 472.6 241 100.0
TAR626G0037 Trochodendron aralioides HOM05D007471 ORTHO05D009481 5.1e-62 241.9 243 51.4
Dinv05327 Davidia involucrata HOM05D007471 ORTHO05D009481 1.3e-57 227.3 246 50.4
Cpa.g.sc136.59 Carica papaya HOM05D007471 ORTHO05D009481 2.1e-55 219.9 243 49.0
CSS0003771 Camellia sinensis var. sinensis HOM05D007471 ORTHO05D009481 4.6e-55 218.8 245 49.8
MBI14_g27042_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 1.0e-54 217.6 233 48.9
Actinidia12353 Actinidia chinensis HOM05D007471 ORTHO05D009481 5.1e-54 215.3 244 47.1
QL04p066931 Quercus lobata HOM05D007471 ORTHO05D009481 1.9e-53 213.4 242 45.9
Hma1.2p1_0599F.1_g186930 Hydrangea macrophylla HOM05D007471 ORTHO05D009481 4.8e-52 208.8 244 45.9
Lj8A138T38 Lonicera japonica HOM05D007471 ORTHO05D009481 4.8e-52 208.8 245 46.1
Rhsim06G0179200 Rhododendron simsii HOM05D000358 ORTHO05D001562 2.4e-51 206.5 242 46.3
Eucgr.K01386 Eucalyptus grandis HOM05D007471 ORTHO05D009481 5.3e-51 205.3 244 44.7
PSO210G0038 Papaver somniferum HOM05D007471 ORTHO05D009481 5.3e-51 205.3 243 45.7
MD17G1121200 Malus domestica HOM05D007471 ORTHO05D009481 6.9e-51 204.9 241 44.4
PSO210G4841 Papaver somniferum HOM05D007471 ORTHO05D009481 1.2e-50 204.1 245 45.3
Ciclev10016450m.g Citrus clementina HOM05D007471 ORTHO05D009481 3.4e-50 202.6 244 45.1
TWI36G0936 Tripterygium wilfordii HOM05D007471 ORTHO05D009481 5.8e-50 201.8 242 44.6
Lalb_Chr10g0094201 Lupinus albus HOM05D007471 ORTHO05D009481 1.0e-49 201.1 242 43.4
Manes.12G067200 Manihot esculenta HOM05D007471 ORTHO05D009481 1.7e-49 200.3 243 44.0
Glyma.09G086000 Glycine max HOM05D007471 ORTHO05D009481 2.2e-49 199.9 243 43.6
Psat1g019920 Pisum sativum HOM05D007471 ORTHO05D009481 2.2e-49 199.9 243 42.0
MD17G1122600 Malus domestica HOM05D007471 ORTHO05D009481 3.8e-49 199.1 241 42.7
Lj6g0025127 Lotus japonicus HOM05D007471 ORTHO05D009481 6.5e-49 198.4 244 44.3
HanXRQChr09g0257421 Helianthus annuus HOM05D007471 ORTHO05D009481 8.4e-49 198.0 244 46.7
Sc21g0000400 Simmondsia chinensis HOM05D007471 ORTHO05D009481 1.4e-48 197.2 245 43.3
Nn1g07565 Nelumbo nucifera HOM05D007471 ORTHO05D009481 1.9e-48 196.8 243 44.4
Glyma.15G195100 Glycine max HOM05D007471 ORTHO05D009481 4.2e-48 195.7 243 42.8
Haze_12583 Corylus avellana HOM05D007471 ORTHO05D009481 7.1e-48 194.9 242 45.9
Nitab4.5_0003086g0070 Nicotiana tabacum HOM05D007471 ORTHO05D009481 9.3e-48 194.5 243 41.6
Peaxi162Scf00359g00320 Petunia axillaris HOM05D007471 ORTHO05D009481 3.5e-47 192.6 241 40.2
RcHm_v2.0_Chr2g0155251 Rosa chinensis HOM05D007471 ORTHO05D009481 4.6e-47 192.2 241 42.7
vmacro12060 Vaccinium macrocarpon HOM05D007471 ORTHO05D009481 6.0e-47 191.8 187 52.9
MELO3C024177.2 Cucumis melo HOM05D007471 ORTHO05D009481 7.9e-47 191.4 247 42.9
Sed0023252 Sechium edule HOM05D007471 ORTHO05D009481 7.9e-47 191.4 244 43.0
Phvul.009G214800 Phaseolus vulgaris HOM05D007471 ORTHO05D009481 1.0e-46 191.0 242 42.6
THA.LOC104819026 Tarenaya hassleriana HOM05D007471 ORTHO05D009481 1.3e-46 190.7 245 41.2
CsaV3_7G002330 Cucumis sativus L. HOM05D007471 ORTHO05D009481 2.3e-46 189.9 247 42.1
Migut.M00062 Erythranthe guttata HOM05D007471 ORTHO05D009481 8.7e-46 188.0 243 43.2
Solyc07g045150.3 Solanum lycopersicum HOM05D007471 ORTHO05D009481 8.7e-46 188.0 244 41.4
FAN09G1454 Fragaria x ananassa HOM05D007471 ORTHO05D009481 1.5e-45 187.2 241 41.9
FvH4_6g40230 Fragaria vesca HOM05D007471 ORTHO05D009481 2.5e-45 186.4 241 42.3
VMungo1309G3041 Vigna mungo HOM05D007471 ORTHO05D009481 2.5e-45 186.4 242 42.1
Sopen07g023700 Solanum pennellii HOM05D007471 ORTHO05D009481 3.3e-45 186.0 245 41.6
PGSC0003DMG402017414 Solanum tuberosum HOM05D007471 ORTHO05D009481 3.3e-45 186.0 244 40.2
FAN14G4986 Fragaria x ananassa HOM05D007471 ORTHO05D009481 4.3e-45 185.7 241 42.3
PGR044G0015 Punica granatum HOM05D007471 ORTHO05D009481 5.7e-45 185.3 242 39.7
FAN05G3962 Fragaria x ananassa HOM05D007471 ORTHO05D009481 7.4e-45 184.9 241 41.9
GSVIVG01030129001 Vitis vinifera HOM05D007471 ORTHO05D009481 9.6e-45 184.5 241 43.6
Sp3g06580 Schrenkiella parvula HOM05D007471 ORTHO05D009481 1.6e-44 183.7 243 38.7
Medtr2g049140 Medicago truncatula HOM05D007471 ORTHO05D009481 3.7e-44 182.6 243 40.7
MSTRG.6626 Avicennia marina HOM05D007471 ORTHO05D009481 6.3e-44 181.8 241 43.2
CARHR082340 Cardamine hirsuta HOM05D007471 ORTHO05D009481 6.3e-44 181.8 243 39.5
SalBow7G1274 Salvia bowleyana HOM05D007471 ORTHO05D009481 1.8e-43 180.3 243 44.4
AL3G19000 Arabidopsis lyrata HOM05D007471 ORTHO05D009481 3.1e-43 179.5 243 37.9
BcaB03g14688 Brassica carinata HOM05D007471 ORTHO05D009481 5.3e-43 178.7 243 37.4
AUR62018237 Chenopodium quinoa HOM05D007471 ORTHO05D009481 6.9e-43 178.3 241 42.7
Thhalv10021420m.g Eutrema salsugineum HOM05D007471 ORTHO05D009481 6.9e-43 178.3 243 37.9
Zm00001eb245410 Zea mays HOM05D007471 ORTHO05D009481 1.5e-42 177.2 245 42.4
AT3G07640 Arabidopsis thaliana HOM05D007471 ORTHO05D009481 3.4e-42 176.0 243 37.0
Lsat_1_v5_gn_9_102921 Lactuca sativa HOM05D007471 ORTHO05D009481 3.4e-42 176.0 243 42.8
Carub.0003s0722 Capsella rubella HOM05D007471 ORTHO05D009481 5.9e-42 175.3 245 36.7
AUR62037766 Chenopodium quinoa HOM05D007471 ORTHO05D009481 5.9e-42 175.3 241 41.1
Cc05_g01930 Coffea canephora HOM05D007471 ORTHO05D009481 7.6e-42 174.9 247 40.5
ClCG02G003070 Citrullus lanatus HOM05D007471 ORTHO05D009481 1.1e-40 171.0 292 35.6
A03p35390 Brassica napus HOM05D007471 ORTHO05D009481 1.9e-40 170.2 243 36.6
BraA03t12717Z Brassica rapa HOM05D007471 ORTHO05D009481 1.9e-40 170.2 243 36.6
Atru.BG.43.p Acer truncatum HOM05D007471 ORTHO05D009481 7.2e-40 168.3 188 48.4
BcaC01g04271 Brassica carinata HOM05D007471 ORTHO05D009481 1.2e-39 167.5 243 37.0
C03p43000 Brassica napus HOM05D007471 ORTHO05D009481 1.2e-39 167.5 243 37.0
Ca_02565_v3 Cicer arietinum L. HOM05D007471 ORTHO05D009481 1.2e-39 167.5 218 41.7
Aa31LG5G18220 Aethionema arabicum HOM05D007471 ORTHO05D009481 2.1e-39 166.8 266 35.7
CAN.G826.3 Capsicum annuum HOM05D007471 ORTHO05D009481 2.1e-39 166.8 243 37.0
Phvul.009G215100 Phaseolus vulgaris HOM05D007471 ORTHO05D009481 2.7e-39 166.4 241 39.0
Oeu000672.1 Olea europaea HOM05D007471 ORTHO05D009481 3.6e-39 166.0 187 46.0
BolC3t16568H Brassica oleracea HOM05D007471 ORTHO05D009481 7.9e-39 164.9 243 36.6
Os02g0582400 Oryza sativa ssp. japonica HOM05D007471 ORTHO05D009481 7.9e-39 164.9 243 37.9
DCAR_019662 Daucus carota HOM05D007471 ORTHO05D009481 1.3e-38 164.1 218 42.7
CDE11G0370 Ceratophyllum demersum HOM05D007471 ORTHO05D009481 7.4e-37 158.3 252 38.9
ECA240G3131 Erigeron canadensis HOM05D001349 ORTHO05D001980 7.4e-37 158.3 242 40.9
Cfa014199 Carpinus fangiana HOM05D005171 ORTHO05D006343 2.2e-36 156.8 238 39.5
SEGI_00651 Sequoiadendron giganteum HOM05D007471 ORTHO05D009481 4.8e-36 155.6 246 37.0
THA.LOC104822442 Tarenaya hassleriana HOM05D007471 ORTHO05D009481 1.2e-34 151.0 250 38.4
Thecc.01G199800 Theobroma cacao HOM05D007471 ORTHO05D009481 1.9e-32 143.7 248 36.3
Duzib133G1025 Durio zibethinus HOM05D007471 ORTHO05D009481 6.1e-31 138.7 248 34.3
Prupe.3G192700 Prunus persica HOM05D007471 ORTHO05D009481 7.9e-31 138.3 172 43.0
Gohir.D07G199700 Gossypium hirsutum HOM05D007471 ORTHO05D009481 1.1e-29 134.4 251 33.9
Gohir.A07G193500 Gossypium hirsutum HOM05D007471 ORTHO05D009481 2.0e-29 133.7 251 34.3
Gorai.001G223900 Gossypium raimondii HOM05D007471 ORTHO05D009481 2.0e-29 133.7 251 33.9
TPR.G20279 Trifolium pratense HOM05D007471 ORTHO05D009481 5.7e-29 132.1 209 35.9
MBI14_g39587_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 9.7e-29 131.3 239 36.8
CSS0004770 Camellia sinensis var. sinensis HOM05D007471 ORTHO05D009481 4.1e-27 125.9 170 43.5
FAN02G2672 Fragaria x ananassa HOM05D007471 ORTHO05D009481 1.3e-25 120.9 241 32.4
BcaB03g14686 Brassica carinata HOM05D007471 ORTHO05D009481 4.2e-24 115.9 174 36.8
TPR.G28406 Trifolium pratense HOM05D007471 ORTHO05D009481 2.7e-23 113.2 202 35.1
COL.COLO4_19658 Corchorus olitorius HOM05D007471 ORTHO05D009481 1.4e-19 100.9 175 34.9
SHI10184 Sapria himalayana HOM05D007471 ORTHO05D009481 1.6e-18 97.4 151 36.4
SGA_v2.0_scaffold73G24486 Striga asiatica HOM05D007471 ORTHO05D009481 1.6e-15 87.4 261 30.3
Peaxi162Scf00289g00310 Petunia axillaris HOM05D007471 ORTHO05D009481 6.1e-15 85.5 92 47.8
Pp3c15_19880 Physcomitrium patens HOM05D007471 ORTHO05D009481 4.8e-12 75.9 243 25.5
ClCG02G003080 Citrullus lanatus HOM05D007471 ORTHO05D009481 8.5e-09 65.1 72 44.4
FAN05G5088 Fragaria x ananassa HOM05D000100 ORTHO05D000052 3.2e-08 63.2 66 47.0
Lsat_1_v5_gn_3_93600 Lactuca sativa HOM05D007471 ORTHO05D233800 8.8e-06 55.1 70 42.9


User provided reference genes

Program Settings