Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0751G143 Amborella trichopoda HOM05D007635 ORTHO05D009612 1.3e-82 309.7 156 100.0
Nn1g07615 Nelumbo nucifera HOM05D007635 ORTHO05D009612 1.0e-42 177.2 136 67.6
TAR374G1245 Trochodendron aralioides HOM05D007635 ORTHO05D009612 1.0e-39 167.2 126 66.7
GSVIVG01030149001 Vitis vinifera HOM05D007635 ORTHO05D009612 1.3e-39 166.8 97 84.5
Ca_09045_v3 Cicer arietinum L. HOM05D007635 ORTHO05D009612 3.9e-39 165.2 150 58.0
Nitab4.5_0000923g0190 Nicotiana tabacum HOM05D007635 ORTHO05D009612 8.7e-39 164.1 100 78.0
QL07p037425 Quercus lobata HOM05D007635 ORTHO05D009612 8.7e-39 164.1 92 82.6
Dinv26633 Davidia involucrata HOM05D007635 ORTHO05D009612 1.1e-38 163.7 112 74.1
CiPaw.09G019400 Carya illinoinensis HOM05D007635 ORTHO05D009612 3.3e-38 162.2 137 61.3
CSS0021722 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 4.3e-38 161.8 127 67.7
CSS0041027 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 4.3e-38 161.8 127 67.7
Ciclev10006014m.g Citrus clementina HOM05D007635 ORTHO05D009612 5.7e-38 161.4 93 82.8
MSTRG.12845 Avicennia marina HOM05D007635 ORTHO05D009612 7.4e-38 161.0 92 83.7
CAN.G904.10 Capsicum annuum HOM05D007635 ORTHO05D009612 7.4e-38 161.0 157 58.0
Lj1g0026019 Lotus japonicus HOM05D007635 ORTHO05D009612 7.4e-38 161.0 158 57.0
Lalb_Chr20g0111441 Lupinus albus HOM05D007635 ORTHO05D009612 7.4e-38 161.0 113 69.9
arahy.Tifrunner.gnm1.ann1.X3I9NV Arachis hypogaea HOM05D007635 ORTHO05D009612 9.7e-38 160.6 93 82.8
Ah.05g169970 Amaranthus hybridus HOM05D007635 ORTHO05D009612 1.3e-37 160.2 138 60.9
Haze_19686 Corylus avellana HOM05D007635 ORTHO05D009612 1.3e-37 160.2 120 67.5
Manes.15G049600 Manihot esculenta HOM05D007635 ORTHO05D009612 1.3e-37 160.2 143 59.4
Eucgr.K02034 Eucalyptus grandis HOM05D007635 ORTHO05D009612 1.6e-37 159.8 93 82.8
unitig_26.g8994 Utricularia gibba HOM05D007635 ORTHO05D009612 1.6e-37 159.8 97 78.4
Potri.001G053700 Populus trichocarpa HOM05D007635 ORTHO05D009612 2.2e-37 159.5 117 67.5
Duzib268G0659 Durio zibethinus HOM05D007635 ORTHO05D009612 3.7e-37 158.7 95 80.0
Eucgr.L01778 Eucalyptus grandis HOM05D007635 ORTHO05D009612 3.7e-37 158.7 93 81.7
Sc26g0000090 Simmondsia chinensis HOM05D007635 ORTHO05D009612 4.8e-37 158.3 97 80.4
Cc05_g09950 Coffea canephora HOM05D007635 ORTHO05D009612 6.3e-37 157.9 136 61.8
PSO675G5663 Papaver somniferum HOM05D007635 ORTHO05D009612 6.3e-37 157.9 156 55.8
Solyc10g007670.4 Solanum lycopersicum HOM05D007635 ORTHO05D009612 6.3e-37 157.9 97 78.4
Sopen10g003580 Solanum pennellii HOM05D007635 ORTHO05D009612 6.3e-37 157.9 97 78.4
PGSC0003DMG400021288 Solanum tuberosum HOM05D007635 ORTHO05D009612 6.3e-37 157.9 97 78.4
Cfa016671 Carpinus fangiana HOM05D003127 ORTHO05D003709 8.2e-37 157.5 93 82.8
Glyma.19G198300 Glycine max HOM05D007635 ORTHO05D009612 8.2e-37 157.5 93 81.7
VMungo1383G2560 Vigna mungo HOM05D007635 ORTHO05D009612 8.2e-37 157.5 93 80.6
Peaxi162Scf00035g02213 Petunia axillaris HOM05D007635 ORTHO05D009612 1.4e-36 156.8 97 77.3
Prupe.7G097800 Prunus persica HOM05D007635 ORTHO05D009612 2.4e-36 156.0 93 78.5
CANSAT64G1146 Cannabis sativa HOM05D007635 ORTHO05D009612 3.1e-36 155.6 93 79.6
Glyma.03G200700 Glycine max HOM05D007635 ORTHO05D009612 3.1e-36 155.6 93 80.6
PGR142G1826 Punica granatum HOM05D007635 ORTHO05D009612 3.1e-36 155.6 93 77.4
Rhsim06G0182000 Rhododendron simsii HOM05D007635 ORTHO05D009612 3.1e-36 155.6 104 76.0
Rhsim06G0183000 Rhododendron simsii HOM05D007635 ORTHO05D009612 3.1e-36 155.6 104 76.0
SEGI_23489 Sequoiadendron giganteum HOM05D007635 ORTHO05D009612 5.3e-36 154.8 96 77.1
Gorai.011G162800 Gossypium raimondii HOM05D007635 ORTHO05D009612 6.9e-36 154.5 95 76.8
PSO541G5044 Papaver somniferum HOM05D007635 ORTHO05D009612 6.9e-36 154.5 93 78.5
Actinidia12337 Actinidia chinensis HOM05D007635 ORTHO05D009612 9.0e-36 154.1 103 72.8
CsaV3_3G037770 Cucumis sativus L. HOM05D007635 ORTHO05D009612 1.2e-35 153.7 107 71.0
FAN02G0889 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.2e-35 153.7 93 77.4
FAN05G0948 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.2e-35 153.7 93 77.4
MBI15_g47427_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 1.2e-35 153.7 147 60.5
Phvul.001G194300 Phaseolus vulgaris HOM05D007635 ORTHO05D009612 1.5e-35 153.3 93 78.5
FvH4_6g20030 Fragaria vesca HOM05D007635 ORTHO05D009612 2.6e-35 152.5 93 76.3
FAN09G2965 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.6e-35 152.5 93 76.3
FAN14G1263 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.6e-35 152.5 93 76.3
MBI15_g36010_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 2.6e-35 152.5 147 59.2
Medtr7g105840 Medicago truncatula HOM05D007635 ORTHO05D009612 2.6e-35 152.5 93 78.5
Psat3g030120 Pisum sativum HOM05D003127 ORTHO05D003709 2.6e-35 152.5 155 56.1
TPR.G23321 Trifolium pratense HOM05D007635 ORTHO05D009612 2.6e-35 152.5 93 78.5
CARHR127160 Cardamine hirsuta HOM05D007635 ORTHO05D009612 3.4e-35 152.1 97 74.2
RcHm_v2.0_Chr3g0475481 Rosa chinensis HOM05D007635 ORTHO05D009612 3.4e-35 152.1 93 76.3
Aa31LG5G4080 Aethionema arabicum HOM05D007635 ORTHO05D009612 4.5e-35 151.8 97 72.2
BcaB06g28657 Brassica carinata HOM05D007635 ORTHO05D009612 4.5e-35 151.8 136 56.6
AUR62027757 Chenopodium quinoa HOM05D007635 ORTHO05D009612 4.5e-35 151.8 124 62.9
A04p25480 Brassica napus HOM05D007635 ORTHO05D009612 5.9e-35 151.4 132 58.3
COL.COLO4_05721 Corchorus olitorius HOM05D001044 ORTHO05D007204 1.0e-34 150.6 95 77.9
vmacro12032 Vaccinium macrocarpon HOM05D007635 ORTHO05D009612 1.0e-34 150.6 132 62.9
Sp4g15480 Schrenkiella parvula HOM05D007635 ORTHO05D009612 1.3e-34 150.2 95 74.7
SGA_v2.0_scaffold130G34228 Striga asiatica HOM05D007635 ORTHO05D009612 1.3e-34 150.2 166 56.6
AL4G28740 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 2.2e-34 149.4 95 73.7
AL569U10010 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 2.2e-34 149.4 95 73.7
ClCG10G018500 Citrullus lanatus HOM05D003127 ORTHO05D003709 2.2e-34 149.4 93 78.5
AT2G33180 Arabidopsis thaliana HOM05D007635 ORTHO05D009612 2.9e-34 149.1 105 70.5
BcaC02g07856 Brassica carinata HOM05D007635 ORTHO05D009612 2.9e-34 149.1 136 55.9
BolC4t27744H Brassica oleracea HOM05D007635 ORTHO05D009612 2.9e-34 149.1 136 55.9
BraA04t18051Z Brassica rapa HOM05D007635 ORTHO05D009612 5.0e-34 148.3 95 73.7
AUR62038521 Chenopodium quinoa HOM05D007635 ORTHO05D009612 5.0e-34 148.3 97 72.2
C04p62620 Brassica napus HOM05D007635 ORTHO05D009612 6.5e-34 147.9 136 55.9
Lsat_1_v5_gn_7_99401 Lactuca sativa HOM05D007635 ORTHO05D009612 6.5e-34 147.9 92 77.2
Thhalv10017331m.g Eutrema salsugineum HOM05D007635 ORTHO05D009612 8.5e-34 147.5 149 53.0
CBR_g50773 Chara braunii HOM05D007635 ORTHO05D009612 1.1e-33 147.1 93 74.2
TWI09G0209 Tripterygium wilfordii HOM05D007635 ORTHO05D009612 1.1e-33 147.1 93 79.6
Zm00001eb101710 Zea mays HOM05D007635 ORTHO05D009612 1.4e-33 146.7 110 67.3
Carub.0004s1461 Capsella rubella HOM05D007635 ORTHO05D009612 1.9e-33 146.4 95 71.6
ECA236G3620 Erigeron canadensis HOM05D007635 ORTHO05D009612 9.4e-33 144.1 93 75.3
Os09g0481800 Oryza sativa ssp. japonica HOM05D007635 ORTHO05D009612 2.1e-32 142.9 92 73.9
Pp3c11_15670 Physcomitrium patens HOM05D007635 ORTHO05D009612 5.1e-31 138.3 97 69.1
AagrBONN_evm.TU.Sc2ySwM_362.2476 Anthoceros agrestis HOM05D007635 ORTHO05D009612 2.2e-29 132.9 93 68.8
Atru.BG.99.p Acer truncatum HOM05D007635 ORTHO05D009612 6.3e-29 131.3 71 85.9
ATR0665G003 Amborella trichopoda HOM05D000032 ORTHO05D003522 8.2e-29 131.0 77 85.7
EL10Ac1g01217 Beta vulgaris HOM05D007635 ORTHO05D009612 1.2e-27 127.1 78 74.4
Nitab4.5_0002209g0110 Nicotiana tabacum HOM05D007635 ORTHO05D009612 2.6e-27 125.9 97 67.0
Aqoxy2G03911 Aquilegia oxysepala HOM05D007635 ORTHO05D009612 1.9e-25 119.8 133 53.4
MD12G1037400 Malus domestica HOM05D007635 ORTHO05D009612 1.9e-25 119.8 72 75.0
HanXRQChr11g0329581 Helianthus annuus HOM05D007635 ORTHO05D009612 7.9e-24 114.4 64 84.4
Cpa.g.sc59.77 Carica papaya HOM05D007635 ORTHO05D009612 3.9e-23 112.1 67 77.6
HPP92_017857 Vanilla planifolia HOM05D007635 ORTHO05D009612 3.9e-23 112.1 76 73.7
FAN05G1739 Fragaria x ananassa HOM05D007635 ORTHO05D009612 2.0e-22 109.8 62 82.3
MELO3C009519.2 Cucumis melo HOM05D003127 ORTHO05D003709 3.3e-22 109.0 63 81.0
Migut.H02083 Erythranthe guttata HOM05D007635 ORTHO05D009612 1.3e-21 107.1 121 49.6
Sed0019283 Sechium edule HOM05D003127 ORTHO05D003709 1.7e-21 106.7 75 68.0
Pp3c11_15610 Physcomitrium patens HOM05D007635 ORTHO05D009612 2.5e-17 92.8 62 71.0
Thecc.04G214500 Theobroma cacao HOM05D007635 ORTHO05D009612 2.0e-06 56.6 53 52.8


User provided reference genes

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