Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0751G103 Amborella trichopoda HOM05D003079 ORTHO05D003461 1.8e-64 249.2 138 100.0
Lj8C183T12 Lonicera japonica HOM05D003079 ORTHO05D003461 5.0e-22 108.2 133 46.6
MBI15_g44396_MAGBIO Magnolia biondii HOM05D003079 ORTHO05D003461 2.3e-19 99.4 136 47.8
Nn1g07629 Nelumbo nucifera HOM05D003079 ORTHO05D003461 1.2e-18 97.1 137 43.8
TAR627G0159 Trochodendron aralioides HOM05D003079 ORTHO05D003461 2.0e-18 96.3 132 47.0
Nitab4.5_0000152g0030 Nicotiana tabacum HOM05D003079 ORTHO05D003461 9.8e-18 94.0 132 43.9
Peaxi162Scf00232g00614 Petunia axillaris HOM05D003079 ORTHO05D003461 2.9e-17 92.4 132 43.9
Sopen07g034350 Solanum pennellii HOM05D003079 ORTHO05D003461 2.9e-17 92.4 135 43.7
RcHm_v2.0_Chr5g0074601 Rosa chinensis HOM05D003079 ORTHO05D003461 8.3e-17 90.9 132 40.2
GSVIVG01014846001 Vitis vinifera HOM05D003079 ORTHO05D003461 1.4e-16 90.1 132 44.7
PSO063G6668 Papaver somniferum HOM05D003079 ORTHO05D003461 5.4e-16 88.2 132 44.7
Potri.001G472000 Populus trichocarpa HOM05D003079 ORTHO05D003461 5.4e-16 88.2 132 42.4
TWI14G0136 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 5.4e-16 88.2 132 43.2
TAR626G1036 Trochodendron aralioides HOM05D003079 ORTHO05D003461 5.4e-16 88.2 132 45.5
CAN.G623.75 Capsicum annuum HOM05D003079 ORTHO05D003461 7.0e-16 87.8 131 43.5
TWI39G1230 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 7.0e-16 87.8 132 43.2
Nitab4.5_0002216g0030 Nicotiana tabacum HOM05D003079 ORTHO05D003461 1.2e-15 87.0 132 41.7
QL08p000493 Quercus lobata HOM05D003079 ORTHO05D003461 1.2e-15 87.0 131 42.0
Nitab4.5_0009408g0020 Nicotiana tabacum HOM05D003079 ORTHO05D003461 1.6e-15 86.7 132 43.2
Duzib268G0697 Durio zibethinus HOM05D003079 ORTHO05D003461 2.0e-15 86.3 132 43.2
Solyc07g066170.4 Solanum lycopersicum HOM05D003079 ORTHO05D003461 4.6e-15 85.1 129 43.4
Thecc.07G001500 Theobroma cacao HOM05D003079 ORTHO05D003461 4.6e-15 85.1 132 42.4
Duzib170G0955 Durio zibethinus HOM05D003079 ORTHO05D003461 6.0e-15 84.7 132 43.2
Manes.05G204700 Manihot esculenta HOM05D003079 ORTHO05D003461 7.8e-15 84.3 132 42.4
Duzib213G0264 Durio zibethinus HOM05D003079 ORTHO05D003461 1.0e-14 84.0 129 45.0
Nitab4.5_0003570g0050 Nicotiana tabacum HOM05D003079 ORTHO05D003461 1.0e-14 84.0 132 42.4
Gorai.013G147800 Gossypium raimondii HOM05D003079 ORTHO05D003461 1.7e-14 83.2 132 43.2
TWI38G1795 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 1.7e-14 83.2 132 42.4
Gohir.D13G131800 Gossypium hirsutum HOM05D003079 ORTHO05D003461 3.0e-14 82.4 132 43.2
PSO782G1655 Papaver somniferum HOM05D003079 ORTHO05D003461 3.0e-14 82.4 132 43.2
Cc05_g15720 Coffea canephora HOM05D003079 ORTHO05D003461 5.0e-14 81.6 132 38.6
Potri.011G169000 Populus trichocarpa HOM05D003079 ORTHO05D003461 6.6e-14 81.3 132 43.2
Ciclev10007777m.g Citrus clementina HOM05D003079 ORTHO05D003461 1.5e-13 80.1 134 40.3
Gohir.A13G128400 Gossypium hirsutum HOM05D003079 ORTHO05D003461 1.9e-13 79.7 132 42.4
MSTRG.16132 Avicennia marina HOM05D003079 ORTHO05D003461 4.3e-13 78.6 131 41.2
MSTRG.13045 Avicennia marina HOM05D003079 ORTHO05D003461 5.6e-13 78.2 132 41.7
FAN16G0740 Fragaria x ananassa HOM05D003079 ORTHO05D003461 5.6e-13 78.2 132 35.6
TAR611G0001 Trochodendron aralioides HOM05D003079 ORTHO05D003461 5.6e-13 78.2 116 44.0
FAN21G1152 Fragaria x ananassa HOM05D003079 ORTHO05D003461 2.8e-12 75.9 132 36.4
FvH4_3g41590 Fragaria vesca HOM05D003079 ORTHO05D003461 3.6e-12 75.5 132 36.4
FAN11G0995 Fragaria x ananassa HOM05D003079 ORTHO05D003461 3.6e-12 75.5 132 36.4
FAN25G3298 Fragaria x ananassa HOM05D003079 ORTHO05D003461 8.1e-12 74.3 134 35.8
MD11G1046100 Malus domestica HOM05D003079 ORTHO05D003461 8.1e-12 74.3 133 36.8
Prupe.6G035500 Prunus persica HOM05D003079 ORTHO05D003461 1.8e-11 73.2 132 37.9
CANSAT11G2157 Cannabis sativa HOM05D003079 ORTHO05D003461 3.1e-11 72.4 132 38.6
Hma1.2p1_0193F.1_g084340 Hydrangea macrophylla HOM05D003079 ORTHO05D003461 3.1e-11 72.4 112 41.1
Oeu052884.2 Olea europaea HOM05D003079 ORTHO05D003461 4.0e-11 72.0 130 40.8
Sc03g0011780 Simmondsia chinensis HOM05D003079 ORTHO05D003461 4.0e-11 72.0 131 38.2
CAN.G492.58 Capsicum annuum HOM05D003079 ORTHO05D003461 5.2e-11 71.6 132 36.4
Oeu052026.1 Olea europaea HOM05D003079 ORTHO05D003461 5.2e-11 71.6 107 43.9
Nitab4.5_0000611g0170 Nicotiana tabacum HOM05D003079 ORTHO05D003461 8.9e-11 70.9 131 37.4
Nitab4.5_0001622g0150 Nicotiana tabacum HOM05D003079 ORTHO05D003461 1.5e-10 70.1 131 36.6
arahy.Tifrunner.gnm1.ann1.FC0SK2 Arachis hypogaea HOM05D003079 ORTHO05D003461 2.0e-10 69.7 132 43.2
arahy.Tifrunner.gnm1.ann1.WAW8B8 Arachis hypogaea HOM05D003079 ORTHO05D003461 2.0e-10 69.7 132 43.2
Oeu006261.2 Olea europaea HOM05D003079 ORTHO05D003461 2.0e-10 69.7 127 38.6
Psat5g231200 Pisum sativum HOM05D003079 ORTHO05D003461 2.0e-10 69.7 133 41.4
SEGI_20118 Sequoiadendron giganteum HOM05D003079 ORTHO05D003461 2.0e-10 69.7 132 37.9
vmacro09798 Vaccinium macrocarpon HOM05D003079 ORTHO05D003461 2.0e-10 69.7 131 35.9
Medtr3g009740 Medicago truncatula HOM05D003079 ORTHO05D003461 3.4e-10 68.9 132 38.6
SGA_v2.0_scaffold186G40233 Striga asiatica HOM05D003079 ORTHO05D003461 3.4e-10 68.9 113 39.8
Oeu015272.1 Olea europaea HOM05D003079 ORTHO05D003461 4.4e-10 68.6 132 37.1
Aqoxy7G02327 Aquilegia oxysepala HOM05D003079 ORTHO05D003461 7.5e-10 67.8 131 36.6
SGA_v2.0_scaffold7G03549 Striga asiatica HOM05D003079 ORTHO05D003461 7.5e-10 67.8 111 39.6
HPP92_007490 Vanilla planifolia HOM05D003079 ORTHO05D003461 9.8e-10 67.4 130 40.0
Eucgr.F03644 Eucalyptus grandis HOM05D003079 ORTHO05D003461 1.7e-09 66.6 132 40.9
Phvul.L001609 Phaseolus vulgaris HOM05D003079 ORTHO05D003461 1.7e-09 66.6 132 40.2
Lj3g0020124 Lotus japonicus HOM05D003079 ORTHO05D003461 3.7e-09 65.5 138 37.0
Sopen10g001680 Solanum pennellii HOM05D003079 ORTHO05D003461 3.7e-09 65.5 131 34.4
COL.COLO4_07790 Corchorus olitorius HOM05D003079 ORTHO05D003461 4.9e-09 65.1 93 45.2
vmacro11641 Vaccinium macrocarpon HOM05D003079 ORTHO05D003461 4.9e-09 65.1 145 33.1
Sed0022199 Sechium edule HOM05D003079 ORTHO05D003461 8.3e-09 64.3 134 35.1
CSS0018146 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 1.4e-08 63.5 113 38.9
Peaxi162Scf00006g00810 Petunia axillaris HOM05D003079 ORTHO05D003461 1.4e-08 63.5 92 40.2
MELO3C014061.2 Cucumis melo HOM05D003079 ORTHO05D003461 1.9e-08 63.2 131 35.1
Dinv19642 Davidia involucrata HOM05D003079 ORTHO05D003461 1.9e-08 63.2 122 36.1
Migut.M01581 Erythranthe guttata HOM05D003079 ORTHO05D003461 1.9e-08 63.2 135 35.6
Zm00001eb101670 Zea mays HOM05D003079 ORTHO05D003461 1.9e-08 63.2 136 32.4
CSS0022300 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 5.4e-08 61.6 95 41.1
CSS0035812 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 5.4e-08 61.6 95 41.1
Dinv40917 Davidia involucrata HOM05D003079 ORTHO05D003461 5.4e-08 61.6 90 42.2
Glyma.06G321400 Glycine max HOM05D003079 ORTHO05D003461 5.4e-08 61.6 130 37.7
TPR.G16690 Trifolium pratense HOM05D003079 ORTHO05D003461 7.1e-08 61.2 132 37.1
Glyma.04G113700 Glycine max HOM05D003079 ORTHO05D003461 9.2e-08 60.8 130 36.2
SalBow8G1693 Salvia bowleyana HOM05D003079 ORTHO05D003461 1.6e-07 60.1 88 39.8
THA.LOC104811703 Tarenaya hassleriana HOM05D003079 ORTHO05D003461 1.6e-07 60.1 133 32.3
PGSC0003DMG400008693 Solanum tuberosum HOM05D003079 ORTHO05D003461 2.1e-07 59.7 131 33.6
DCAR_017612 Daucus carota HOM05D003079 ORTHO05D003461 2.7e-07 59.3 134 35.1
SGA_v2.0_scaffold92G28159 Striga asiatica HOM05D003079 ORTHO05D003461 2.7e-07 59.3 134 35.8
ClCG10G003820 Citrullus lanatus HOM05D003079 ORTHO05D003461 3.5e-07 58.9 131 32.8
Actinidia30351 Actinidia chinensis HOM05D003079 ORTHO05D003461 4.6e-07 58.5 131 32.8
ClCG00G001200 Citrullus lanatus HOM05D003079 ORTHO05D003461 6.0e-07 58.2 131 32.8
ClCG10G003930 Citrullus lanatus HOM05D003079 ORTHO05D003461 6.0e-07 58.2 131 32.8
Os09g0481300 Oryza sativa ssp. japonica HOM05D003079 ORTHO05D003461 6.0e-07 58.2 130 31.5
Aqoxy4G02267 Aquilegia oxysepala HOM05D003079 ORTHO05D003461 7.8e-07 57.8 132 34.1
AUR62043120 Chenopodium quinoa HOM05D003079 ORTHO05D003461 1.0e-06 57.4 131 36.6
Oeu005543.1 Olea europaea HOM05D003079 ORTHO05D003461 1.0e-06 57.4 131 33.6
Sabra11G0137800 Salix brachista HOM05D003079 ORTHO05D003461 1.0e-06 57.4 132 35.6
Gohir.A11G276200 Gossypium hirsutum HOM05D003079 ORTHO05D003461 1.3e-06 57.0 134 38.1
PGSC0003DMG400022146 Solanum tuberosum HOM05D003079 ORTHO05D003461 1.3e-06 57.0 133 32.3
Gohir.D11G286600 Gossypium hirsutum HOM05D003079 ORTHO05D003461 1.7e-06 56.6 134 38.1
Gorai.007G310000 Gossypium raimondii HOM05D003079 ORTHO05D003461 1.7e-06 56.6 134 38.1
Os08g0497900 Oryza sativa ssp. japonica HOM05D003079 ORTHO05D003461 2.3e-06 56.2 123 35.0
Actinidia31529 Actinidia chinensis HOM05D003079 ORTHO05D003461 3.0e-06 55.8 103 36.9
Aa31LG3G12120 Aethionema arabicum HOM05D003079 ORTHO05D003461 3.0e-06 55.8 130 34.6
DCAR_013756 Daucus carota HOM05D003079 ORTHO05D003461 5.1e-06 55.1 132 34.8


User provided reference genes

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