Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0751G090 Amborella trichopoda HOM05D000011 ORTHO05D000018 1.6e-35 152.1 71 100.0
ATR1149G081 Amborella trichopoda HOM05D000011 ORTHO05D000157 5.6e-09 63.9 61 44.3
ATR1149G072 Amborella trichopoda HOM05D000011 ORTHO05D000157 9.5e-09 63.2 71 40.8
CARHR183360 Cardamine hirsuta HOM05D000011 ORTHO05D000018 1.8e-07 58.9 61 45.9
ATR0751G098 Amborella trichopoda HOM05D000011 ORTHO05D000157 3.1e-07 58.2 63 44.4
MBI15_g09157_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000018 3.1e-07 58.2 70 45.7
ATR1153G099 Amborella trichopoda HOM05D000011 ORTHO05D000018 1.5e-06 55.8 58 46.6
Glyma.09G210400 Glycine max HOM05D000011 ORTHO05D000157 1.5e-06 55.8 63 42.9
MBI15_g39785_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000157 1.5e-06 55.8 66 42.4
ATR0730G223 Amborella trichopoda HOM05D000011 ORTHO05D000157 2.0e-06 55.5 66 40.9
Glyma.01G010700 Glycine max HOM05D000011 ORTHO05D000157 2.0e-06 55.5 63 42.9
CSS0038765 Camellia sinensis var. sinensis HOM05D000011 ORTHO05D000157 2.6e-06 55.1 65 49.2
MBI15_g02252_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000157 3.4e-06 54.7 63 44.4
ATR1149G063 Amborella trichopoda HOM05D000011 ORTHO05D000157 4.4e-06 54.3 67 43.3
A02p40340 Brassica napus HOM05D000011 ORTHO05D000018 4.4e-06 54.3 61 45.9
Gorai.007G324200 Gossypium raimondii HOM05D000011 ORTHO05D000018 4.4e-06 54.3 61 37.7
MBI15_g42839_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000018 4.4e-06 54.3 61 41.0
Medtr5g027870 Medicago truncatula HOM05D000011 ORTHO05D000157 4.4e-06 54.3 63 42.9
Lj2g0027735 Lotus japonicus HOM05D000011 ORTHO05D000157 5.8e-06 53.9 63 42.9
MBI14_g00924_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000018 5.8e-06 53.9 63 41.3
MBI15_g47075_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000018 7.6e-06 53.5 70 40.0
VMungo1309G0058 Vigna mungo HOM05D000011 ORTHO05D000018 7.6e-06 53.5 61 42.6
ATR0751G062 Amborella trichopoda HOM05D000011 ORTHO05D000157 9.9e-06 53.1 61 39.3
BcaNung05226 Brassica carinata HOM05D000011 ORTHO05D000018 9.9e-06 53.1 62 43.5
A02p40560 Brassica napus HOM05D000011 ORTHO05D000018 9.9e-06 53.1 61 44.3
Gohir.D11G307200 Gossypium hirsutum HOM05D000011 ORTHO05D000018 9.9e-06 53.1 66 34.8
MBI14_g01379_MAGBIO Magnolia biondii HOM05D000011 ORTHO05D000018 9.9e-06 53.1 61 37.7
TAR629G1380 Trochodendron aralioides HOM05D000011 ORTHO05D000018 9.9e-06 53.1 64 40.6


User provided reference genes

Program Settings