Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0751G013 Amborella trichopoda HOM05D007436 ORTHO05D009398 1.7e-137 492.7 242 100.0
MBI14_g12730_MAGBIO Magnolia biondii HOM05D007436 ORTHO05D009398 2.0e-82 309.7 232 65.5
Dinv04377 Davidia involucrata HOM05D007436 ORTHO05D009398 4.9e-81 305.1 219 67.6
TAR627G0530 Trochodendron aralioides HOM05D007436 ORTHO05D009398 1.1e-80 303.9 217 68.2
Hma1.2p1_0394F.1_g143390 Hydrangea macrophylla HOM05D007436 ORTHO05D009398 6.6e-78 294.7 225 66.7
MSTRG.14579 Avicennia marina HOM05D007436 ORTHO05D009398 1.9e-77 293.1 202 70.3
Glyma.15G123400 Glycine max HOM05D007436 ORTHO05D009398 4.8e-76 288.5 206 68.9
QL05p066185 Quercus lobata HOM05D007436 ORTHO05D009398 1.4e-75 287.0 208 67.3
Rhsim13G0138000 Rhododendron simsii HOM05D007436 ORTHO05D009398 1.4e-75 287.0 233 63.1
Actinidia01458 Actinidia chinensis HOM05D007436 ORTHO05D009398 4.0e-75 285.4 194 68.6
Migut.H01642 Erythranthe guttata HOM05D007436 ORTHO05D009398 5.3e-75 285.0 203 68.0
Thecc.06G244700 Theobroma cacao HOM05D007436 ORTHO05D009398 5.3e-75 285.0 198 69.7
Glyma.09G017600 Glycine max HOM05D007436 ORTHO05D009398 1.2e-74 283.9 203 67.5
EL10Ac6g14103 Beta vulgaris HOM05D007436 ORTHO05D009398 1.5e-74 283.5 232 61.6
VMungo0540G0488 Vigna mungo HOM05D007436 ORTHO05D009398 1.5e-74 283.5 222 64.9
PGR004G2900 Punica granatum HOM05D007436 ORTHO05D009398 2.6e-74 282.7 193 71.0
Prupe.4G000400 Prunus persica HOM05D007436 ORTHO05D009398 3.4e-74 282.3 225 61.8
Aqoxy5G00546 Aquilegia oxysepala HOM05D007436 ORTHO05D009398 7.6e-74 281.2 171 74.9
RcHm_v2.0_Chr5g0000011 Rosa chinensis HOM05D007436 ORTHO05D009398 1.3e-73 280.4 228 61.8
Phvul.006G134500 Phaseolus vulgaris HOM05D007436 ORTHO05D009398 2.9e-73 279.3 202 66.8
Ciclev10016151m.g Citrus clementina HOM05D007436 ORTHO05D009398 3.8e-73 278.9 178 71.9
Nitab4.5_0001663g0200 Nicotiana tabacum HOM05D007436 ORTHO05D009398 3.8e-73 278.9 194 69.1
Gohir.D05G180600 Gossypium hirsutum HOM05D007436 ORTHO05D009398 8.4e-73 277.7 197 66.5
Gorai.009G185600 Gossypium raimondii HOM05D007436 ORTHO05D009398 8.4e-73 277.7 197 66.5
Nitab4.5_0000147g0110 Nicotiana tabacum HOM05D007436 ORTHO05D009398 1.1e-72 277.3 193 68.9
GSVIVG01002756001 Vitis vinifera HOM05D007436 ORTHO05D009398 1.4e-72 276.9 198 68.2
FvH4_3g00011 Fragaria vesca HOM05D007436 ORTHO05D009398 3.2e-72 275.8 196 67.9
Medtr2g028000 Medicago truncatula HOM05D007436 ORTHO05D009398 4.2e-72 275.4 236 57.2
CAN.G1905.6 Capsicum annuum HOM05D007436 ORTHO05D009398 5.4e-72 275.0 190 67.4
CDE06G2435 Ceratophyllum demersum HOM05D007436 ORTHO05D009398 5.4e-72 275.0 218 62.8
Psat1g171240 Pisum sativum HOM05D007436 ORTHO05D009398 5.4e-72 275.0 236 58.9
CDE03G0161 Ceratophyllum demersum HOM05D007436 ORTHO05D009398 7.1e-72 274.6 215 63.3
COL.COLO4_31969 Corchorus olitorius HOM05D007436 ORTHO05D009398 7.1e-72 274.6 199 66.8
Potri.016G000900 Populus trichocarpa HOM05D007436 ORTHO05D009398 7.1e-72 274.6 177 71.8
Sed0017957 Sechium edule HOM05D007436 ORTHO05D009398 7.1e-72 274.6 192 69.3
Sc24g0002050 Simmondsia chinensis HOM05D007436 ORTHO05D009398 7.1e-72 274.6 231 58.0
Sopen04g007390 Solanum pennellii HOM05D007436 ORTHO05D009398 7.1e-72 274.6 173 72.3
Ah.02g128250 Amaranthus hybridus HOM05D007436 ORTHO05D009398 1.2e-71 273.9 227 59.5
Haze_07065 Corylus avellana HOM05D007436 ORTHO05D009398 1.2e-71 273.9 208 64.4
Potri.006G000600 Populus trichocarpa HOM05D007436 ORTHO05D009398 2.1e-71 273.1 175 72.0
Solyc04g015330.3 Solanum lycopersicum HOM05D007436 ORTHO05D009398 2.1e-71 273.1 173 72.3
PGSC0003DMG400027262 Solanum tuberosum HOM05D007436 ORTHO05D009398 2.1e-71 273.1 171 72.5
TWI38G0239 Tripterygium wilfordii HOM05D007436 ORTHO05D009398 2.1e-71 273.1 191 69.1
CsaV3_6G047980 Cucumis sativus L. HOM05D007436 ORTHO05D009398 2.7e-71 272.7 192 67.2
TPR.G10477 Trifolium pratense HOM05D007436 ORTHO05D009398 3.5e-71 272.3 236 57.6
AUR62028431 Chenopodium quinoa HOM05D007436 ORTHO05D009398 6.0e-71 271.6 225 60.0
Ca_24687_v3 Cicer arietinum L. HOM05D007436 ORTHO05D009398 6.0e-71 271.6 218 61.0
ECA247G4131 Erigeron canadensis HOM05D007436 ORTHO05D009398 6.0e-71 271.6 197 65.5
MD10G1342400 Malus domestica HOM05D007436 ORTHO05D009398 7.9e-71 271.2 189 66.7
Lsat_1_v5_gn_7_12720 Lactuca sativa HOM05D007436 ORTHO05D009398 1.3e-70 270.4 204 63.7
Lj6g0025098 Lotus japonicus HOM05D007436 ORTHO05D009398 1.3e-70 270.4 200 65.0
FAN21G3717 Fragaria x ananassa HOM05D007436 ORTHO05D009398 1.8e-70 270.0 196 66.8
Lalb_Chr15g0088471 Lupinus albus HOM05D007436 ORTHO05D009398 3.0e-70 269.2 200 64.5
AUR62002774 Chenopodium quinoa HOM05D007436 ORTHO05D009398 6.7e-70 268.1 221 61.1
ClCG01G021000 Citrullus lanatus HOM05D007436 ORTHO05D009398 6.7e-70 268.1 236 59.7
Cc09_g00050 Coffea canephora HOM05D007436 ORTHO05D009398 1.5e-69 266.9 236 58.9
DCAR_015316 Daucus carota HOM05D007436 ORTHO05D009398 7.4e-69 264.6 174 72.4
HPP92_000124 Vanilla planifolia HOM05D007436 ORTHO05D009398 7.4e-69 264.6 222 60.4
vmacro03584 Vaccinium macrocarpon HOM05D007436 ORTHO05D009398 9.6e-69 264.2 245 57.1
Cpa.g.sc27.183 Carica papaya HOM05D007436 ORTHO05D009398 2.8e-68 262.7 216 61.1
Oeu016929.1 Olea europaea HOM05D007436 ORTHO05D009398 6.2e-68 261.5 183 68.3
HanXRQChr05g0129051 Helianthus annuus HOM05D007436 ORTHO05D009398 1.8e-67 260.0 171 69.0
Nn3g16606 Nelumbo nucifera HOM05D007436 ORTHO05D009398 7.6e-66 254.6 153 77.1
Hund25779 Selenicereus undatus HOM05D007436 ORTHO05D009398 7.6e-66 254.6 220 58.2
Os09g0287300 Oryza sativa ssp. japonica HOM05D007436 ORTHO05D009398 4.9e-65 251.9 177 67.8
Mapoly0056s0036 Marchantia polymorpha HOM05D007436 ORTHO05D009398 8.4e-65 251.1 184 64.1
CiPaw.09G113200 Carya illinoinensis HOM05D007436 ORTHO05D009398 1.9e-64 250.0 157 73.2
THA.LOC104813862 Tarenaya hassleriana HOM05D007436 ORTHO05D009398 1.9e-64 250.0 171 68.4
Peaxi162Scf00563g00525 Petunia axillaris HOM05D007436 ORTHO05D009398 2.1e-63 246.5 154 73.4
AL5G32730 Arabidopsis lyrata HOM05D007436 ORTHO05D009398 2.7e-63 246.1 189 63.5
Thhalv10010705m.g Eutrema salsugineum HOM05D007436 ORTHO05D009398 2.7e-63 246.1 215 57.7
Zm00001eb309010 Zea mays HOM05D007436 ORTHO05D009398 2.7e-63 246.1 181 66.9
AT3G52155 Arabidopsis thaliana HOM05D007436 ORTHO05D009398 6.0e-63 245.0 175 66.9
Sabra06G0000900 Salix brachista HOM05D002163 ORTHO05D002386 6.0e-63 245.0 154 72.7
arahy.Tifrunner.gnm1.ann1.61UQ0U Arachis hypogaea HOM05D007436 ORTHO05D009398 3.0e-62 242.7 161 72.7
CARHR161900 Cardamine hirsuta HOM05D007436 ORTHO05D009398 3.0e-62 242.7 173 66.5
Carub.0005s1851 Capsella rubella HOM05D007436 ORTHO05D009398 3.9e-62 242.3 176 64.8
Sp5g10120 Schrenkiella parvula HOM05D007436 ORTHO05D009398 3.9e-62 242.3 175 64.6
Aa31LG10G7250 Aethionema arabicum HOM05D007436 ORTHO05D009398 1.1e-61 240.7 172 64.5
Pp3c4_8570 Physcomitrium patens HOM05D007436 ORTHO05D009398 3.7e-60 235.7 202 56.9
A03p48730 Brassica napus HOM05D007436 ORTHO05D009398 1.1e-59 234.2 173 63.0
BcaC06g33383 Brassica carinata HOM05D007436 ORTHO05D009398 1.8e-59 233.4 173 62.4
C07p46820 Brassica napus HOM05D007436 ORTHO05D009398 1.8e-59 233.4 173 62.4
BolC7t45199H Brassica oleracea HOM05D007436 ORTHO05D009398 1.8e-59 233.4 173 62.4
BraA03t13973Z Brassica rapa HOM05D007436 ORTHO05D009398 1.8e-59 233.4 174 62.1
Zm00001eb097480 Zea mays HOM05D007436 ORTHO05D009398 1.8e-59 233.4 152 71.7
AagrBONN_evm.TU.Sc2ySwM_228.5510 Anthoceros agrestis HOM05D007436 ORTHO05D009398 7.6e-58 228.0 172 64.0
Atru.chr1.2207 Acer truncatum HOM05D002163 ORTHO05D002386 2.2e-57 226.5 179 62.0
SMO358G0652 Selaginella moellendorffii HOM05D007436 ORTHO05D009398 4.2e-56 222.2 170 58.8
CBR_g31519 Chara braunii HOM05D007436 ORTHO05D009398 3.2e-48 196.1 176 55.1
Hma1.2p1_0394F.1_g143400 Hydrangea macrophylla HOM05D007436 ORTHO05D009398 4.2e-48 195.7 164 62.2
Lj1A1250G60 Lonicera japonica HOM05D007436 ORTHO05D009398 9.4e-48 194.5 130 72.3
Gohir.A05G177200 Gossypium hirsutum HOM05D007436 ORTHO05D009398 2.5e-45 186.4 143 61.5
Sabra16G0007700 Salix brachista HOM05D002163 ORTHO05D002386 7.4e-45 184.9 217 49.3
MELO3C007986.2 Cucumis melo HOM05D007436 ORTHO05D009398 3.4e-42 176.0 172 54.7
Manes.09G072800 Manihot esculenta HOM05D007436 ORTHO05D009398 2.5e-40 169.9 151 59.6
SGA_v2.0_scaffold49G18215 Striga asiatica HOM05D007436 ORTHO05D009398 1.2e-39 167.5 191 47.6
Eucgr.D00973 Eucalyptus grandis HOM05D007436 ORTHO05D009398 2.6e-37 159.8 222 43.2
SEGI_34845 Sequoiadendron giganteum HOM05D007436 ORTHO05D009398 2.1e-31 140.2 83 73.5
MCO14G290 Micromonas commoda HOM05D007436 ORTHO05D009398 2.7e-31 139.8 203 40.9
Cre10.g431850 Chlamydomonas reinhardtii HOM05D007436 ORTHO05D009398 2.2e-28 130.2 136 42.6
PRCOL_00004330 Prasinoderma coloniale HOM05D007436 ORTHO05D009398 4.7e-23 112.5 158 38.6
PRCOL_00006376 Prasinoderma coloniale HOM05D007436 ORTHO05D009398 5.7e-21 105.5 175 34.9
Lj1A1250G59 Lonicera japonica HOM05D007436 ORTHO05D009398 8.3e-12 75.1 39 82.1


User provided reference genes

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