Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0749G075 Amborella trichopoda HOM05D006497 ORTHO05D008263 2.4e-66 255.4 130 100.0
ATR0304G027 Amborella trichopoda HOM05D006497 ORTHO05D008263 1.7e-59 232.6 130 93.1
Hma1.2p1_0049F.1_g028230 Hydrangea macrophylla HOM05D006497 ORTHO05D008263 2.9e-35 152.1 124 66.9
Thecc.09G049300 Theobroma cacao HOM05D006497 ORTHO05D008263 4.9e-35 151.4 127 63.0
PSO210G2909 Papaver somniferum HOM05D006497 ORTHO05D008263 1.4e-34 149.8 109 68.8
COL.COLO4_21011 Corchorus olitorius HOM05D006497 ORTHO05D008263 2.4e-34 149.1 129 59.7
CSS0028638 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 1.2e-33 146.7 109 67.9
Potri.018G058200 Populus trichocarpa HOM05D006497 ORTHO05D008263 1.6e-33 146.4 97 70.1
Gorai.001G024500 Gossypium raimondii HOM05D006497 ORTHO05D008263 2.1e-33 146.0 118 61.9
Nitab4.5_0002021g0040 Nicotiana tabacum HOM05D006497 ORTHO05D008263 2.1e-33 146.0 128 62.5
GSVIVG01035327001 Vitis vinifera HOM05D006497 ORTHO05D008263 2.1e-33 146.0 107 68.2
Actinidia18207 Actinidia chinensis HOM05D006497 ORTHO05D008263 2.7e-33 145.6 97 73.2
Cpa.g.sc27.217 Carica papaya HOM05D006497 ORTHO05D008263 2.7e-33 145.6 129 61.2
Duzib168G0301 Durio zibethinus HOM05D006497 ORTHO05D008263 2.7e-33 145.6 128 60.2
Sc09g0009540 Simmondsia chinensis HOM05D006497 ORTHO05D008263 3.5e-33 145.2 109 67.9
Gohir.A07G022176 Gossypium hirsutum HOM05D006497 ORTHO05D008263 4.6e-33 144.8 129 58.9
Peaxi162Scf00840g00427 Petunia axillaris HOM05D006497 ORTHO05D008263 4.6e-33 144.8 97 73.2
EL10Ac2g03958 Beta vulgaris HOM05D006497 ORTHO05D008263 6.0e-33 144.4 121 62.8
CSS0007660 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 6.0e-33 144.4 114 64.9
CSS0049899 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 6.0e-33 144.4 114 64.9
Nitab4.5_0000318g0100 Nicotiana tabacum HOM05D006497 ORTHO05D008263 6.0e-33 144.4 127 60.6
CDE10G1018 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 1.0e-32 143.7 109 65.1
QL12p040844 Quercus lobata HOM05D006497 ORTHO05D008263 1.0e-32 143.7 128 59.4
TAR636G3582 Trochodendron aralioides HOM05D006497 ORTHO05D008263 1.0e-32 143.7 95 74.7
PSO210G1815 Papaver somniferum HOM05D006497 ORTHO05D008263 1.3e-32 143.3 126 61.1
CiPaw.08G027800 Carya illinoinensis HOM05D006497 ORTHO05D008263 2.3e-32 142.5 133 62.4
CANSAT54G2618 Cannabis sativa HOM05D006497 ORTHO05D008263 3.0e-32 142.1 119 58.0
Atru.chr7.2042 Acer truncatum HOM05D006497 ORTHO05D008263 5.1e-32 141.4 132 58.3
Ah.10g034670 Amaranthus hybridus HOM05D006497 ORTHO05D008263 5.1e-32 141.4 108 67.6
PGSC0003DMG400012416 Solanum tuberosum HOM05D006497 ORTHO05D008263 5.1e-32 141.4 121 62.0
CDE10G0177 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 6.6e-32 141.0 129 59.7
Cc08_g10030 Coffea canephora HOM05D006497 ORTHO05D008263 6.6e-32 141.0 106 65.1
Rhsim05G0006000 Rhododendron simsii HOM05D006497 ORTHO05D008263 6.6e-32 141.0 107 68.2
Sopen07g031330 Solanum pennellii HOM05D006497 ORTHO05D008263 6.6e-32 141.0 121 61.2
Nn8g39006 Nelumbo nucifera HOM05D006497 ORTHO05D008263 1.5e-31 139.8 116 65.5
Aqoxy6G00985 Aquilegia oxysepala HOM05D006497 ORTHO05D008263 1.9e-31 139.4 122 61.5
AUR62040211 Chenopodium quinoa HOM05D006497 ORTHO05D008263 1.9e-31 139.4 119 60.5
Solyc07g063140.1 Solanum lycopersicum HOM05D006497 ORTHO05D008263 1.9e-31 139.4 121 60.3
MELO3C003479.2 Cucumis melo HOM05D006497 ORTHO05D008263 2.5e-31 139.0 115 60.9
Eucgr.C00622 Eucalyptus grandis HOM05D006497 ORTHO05D008263 3.3e-31 138.7 96 69.8
Haze_01965 Corylus avellana HOM05D006497 ORTHO05D008263 4.3e-31 138.3 95 73.7
ClCG11G014990 Citrullus lanatus HOM05D006497 ORTHO05D008263 5.6e-31 137.9 110 62.7
ECA246G5018 Erigeron canadensis HOM05D006497 ORTHO05D008263 7.3e-31 137.5 107 66.4
Migut.E01547 Erythranthe guttata HOM05D006497 ORTHO05D008263 7.3e-31 137.5 129 56.6
FvH4_2g35131 Fragaria vesca HOM05D006497 ORTHO05D008263 9.5e-31 137.1 129 58.1
MD08G1108800 Malus domestica HOM05D006497 ORTHO05D008263 9.5e-31 137.1 96 68.8
Sabra18G0054600 Salix brachista HOM05D006497 ORTHO05D008263 9.5e-31 137.1 97 66.0
FAN15G0473 Fragaria x ananassa HOM05D006497 ORTHO05D008263 1.2e-30 136.7 130 57.7
RcHm_v2.0_Chr6g0306821 Rosa chinensis HOM05D006497 ORTHO05D008263 1.6e-30 136.3 114 63.2
Prupe.1G443400 Prunus persica HOM05D006497 ORTHO05D008263 2.1e-30 136.0 126 57.1
PGR031G1870 Punica granatum HOM05D006497 ORTHO05D008263 2.1e-30 136.0 114 61.4
SalBow1G7152 Salvia bowleyana HOM05D006497 ORTHO05D008263 2.1e-30 136.0 129 57.4
Cfa005390 Carpinus fangiana HOM05D006497 ORTHO05D008263 2.8e-30 135.6 126 59.5
MSTRG.11681 Avicennia marina HOM05D006497 ORTHO05D008263 3.6e-30 135.2 97 67.0
CsaV3_3G048400 Cucumis sativus L. HOM05D006497 ORTHO05D008263 3.6e-30 135.2 115 60.0
AUR62009213 Chenopodium quinoa HOM05D006497 ORTHO05D008263 8.1e-30 134.0 121 60.3
Nn8g40951 Nelumbo nucifera HOM05D006497 ORTHO05D008263 8.1e-30 134.0 117 64.1
TPR.G11934 Trifolium pratense HOM05D006497 ORTHO05D008263 1.1e-29 133.7 113 60.2
Ciclev10009788m.g Citrus clementina HOM05D006497 ORTHO05D008263 1.4e-29 133.3 97 67.0
unitig_32.g11478 Utricularia gibba HOM05D006497 ORTHO05D008263 1.8e-29 132.9 97 63.9
Os03g0651000 Oryza sativa ssp. japonica HOM05D006497 ORTHO05D008263 2.3e-29 132.5 97 61.9
HPP92_013944 Vanilla planifolia HOM05D006497 ORTHO05D008263 3.1e-29 132.1 110 57.3
CAN.G162.59 Capsicum annuum HOM05D006497 ORTHO05D008263 5.2e-29 131.3 122 57.4
Ca_10596_v3 Cicer arietinum L. HOM05D006497 ORTHO05D008263 8.9e-29 130.6 113 58.4
Migut.A00169 Erythranthe guttata HOM05D006497 ORTHO05D008263 8.9e-29 130.6 97 61.9
THA.LOC104803742 Tarenaya hassleriana HOM05D006497 ORTHO05D008263 8.9e-29 130.6 97 62.9
arahy.Tifrunner.gnm1.ann1.0Y6FKJ Arachis hypogaea HOM05D006497 ORTHO05D008263 1.2e-28 130.2 112 59.8
DCAR_003057 Daucus carota HOM05D006497 ORTHO05D008263 1.2e-28 130.2 129 55.8
Lsat_1_v5_gn_3_27161 Lactuca sativa HOM05D006497 ORTHO05D008263 2.0e-28 129.4 97 66.0
Lalb_Chr06g0162131 Lupinus albus HOM05D006497 ORTHO05D008263 2.0e-28 129.4 102 58.8
Sed0009640 Sechium edule HOM05D006497 ORTHO05D008263 2.6e-28 129.0 111 56.8
SEGI_35319 Sequoiadendron giganteum HOM05D006497 ORTHO05D008263 2.6e-28 129.0 120 55.0
Sp7g30690 Schrenkiella parvula HOM05D006497 ORTHO05D008263 3.4e-28 128.6 108 62.0
arahy.Tifrunner.gnm1.ann1.E0CW41 Arachis hypogaea HOM05D006497 ORTHO05D008263 5.8e-28 127.9 111 58.6
Sed0025405 Sechium edule HOM05D006497 ORTHO05D008263 5.8e-28 127.9 97 63.9
Zm00001eb218450 Zea mays HOM05D006497 ORTHO05D008263 5.8e-28 127.9 97 60.8
Glyma.10G214200 Glycine max HOM05D006497 ORTHO05D008263 7.5e-28 127.5 127 51.2
A08p17840 Brassica napus HOM05D006497 ORTHO05D008263 9.9e-28 127.1 113 57.5
Psat6g186080 Pisum sativum HOM05D006497 ORTHO05D008263 9.9e-28 127.1 113 56.6
Thhalv10026449m.g Eutrema salsugineum HOM05D006497 ORTHO05D008263 1.7e-27 126.3 108 59.3
Medtr1g095920 Medicago truncatula HOM05D006497 ORTHO05D008263 2.2e-27 125.9 113 54.0
BcaB03g12770 Brassica carinata HOM05D006497 ORTHO05D008263 2.9e-27 125.6 136 52.2
C03p86910 Brassica napus HOM05D006497 ORTHO05D008263 2.9e-27 125.6 97 62.9
BolC3t20984H Brassica oleracea HOM05D006497 ORTHO05D008263 2.9e-27 125.6 97 62.9
TPR.G1790 Trifolium pratense HOM05D006497 ORTHO05D008263 2.9e-27 125.6 101 62.4
BraA08t33734Z Brassica rapa HOM05D006497 ORTHO05D008263 3.7e-27 125.2 113 56.6
Glyma.20G177400 Glycine max HOM05D006497 ORTHO05D008263 1.4e-26 123.2 127 50.4
Phvul.007G091500 Phaseolus vulgaris HOM05D006497 ORTHO05D008263 1.9e-26 122.9 106 56.6
Lj5g0021165 Lotus japonicus HOM05D006497 ORTHO05D008263 7.1e-26 120.9 129 48.1
VMungo0720G1877 Vigna mungo HOM05D006497 ORTHO05D008263 7.1e-26 120.9 106 55.7
SGA_v2.0_scaffold163G38048 Striga asiatica HOM05D006497 ORTHO05D008263 9.2e-26 120.6 175 41.7
Carub.0007s0757 Capsella rubella HOM05D006497 ORTHO05D008263 1.2e-25 120.2 110 54.5
AL7G18780 Arabidopsis lyrata HOM05D006497 ORTHO05D008263 2.1e-25 119.4 100 57.0
Oeu011793.1 Olea europaea HOM05D006497 ORTHO05D008263 2.7e-25 119.0 135 47.4
AT4G32915 Arabidopsis thaliana HOM05D006497 ORTHO05D008263 3.5e-25 118.6 110 53.6
BcaNung02143 Brassica carinata HOM05D006497 ORTHO05D008263 4.6e-25 118.2 107 55.1
Aa31LG2G18050 Aethionema arabicum HOM05D006497 ORTHO05D008263 7.8e-25 117.5 93 63.4
CARHR240920 Cardamine hirsuta HOM05D006497 ORTHO05D008263 3.0e-24 115.5 108 55.6
Hund19485 Selenicereus undatus HOM05D006497 ORTHO05D008263 5.1e-24 114.8 147 45.6
A03p61670 Brassica napus HOM05D006497 ORTHO05D008263 8.6e-24 114.0 94 58.5
BraA03t15206Z Brassica rapa HOM05D006497 ORTHO05D008263 8.6e-24 114.0 94 58.5
C07p59400 Brassica napus HOM05D006497 ORTHO05D008263 1.5e-23 113.2 94 58.5
BolC7t46384H Brassica oleracea HOM05D006497 ORTHO05D008263 1.5e-23 113.2 130 48.5
Mapoly0154s0030 Marchantia polymorpha HOM05D006497 ORTHO05D008263 1.8e-21 106.3 105 49.5
SGA_v2.0_scaffold169G38673 Striga asiatica HOM05D006497 ORTHO05D008263 5.2e-21 104.8 108 53.7
FAN27G1249 Fragaria x ananassa HOM05D006497 ORTHO05D008263 2.4e-18 95.9 129 48.1
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 5.4e-18 94.7 191 35.1
TWI32G0413 Tripterygium wilfordii HOM05D006497 ORTHO05D008263 1.6e-17 93.2 100 53.0
Pp3c2_33430 Physcomitrium patens HOM05D006497 ORTHO05D008263 2.7e-17 92.4 123 38.2
HanXRQChr17g0538891 Helianthus annuus HOM05D006497 ORTHO05D008263 6.0e-17 91.3 73 60.3
MBI13_g05466_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 1.3e-16 90.1 63 69.8
vmacro08276 Vaccinium macrocarpon HOM05D006497 ORTHO05D008263 2.3e-16 89.4 62 72.6
CBR_g31997 Chara braunii HOM05D006497 ORTHO05D008263 3.0e-16 89.0 99 45.5
Dinv27945 Davidia involucrata HOM05D006497 ORTHO05D008263 6.6e-16 87.8 91 51.6
SMO146G0150 Selaginella moellendorffii HOM05D006497 ORTHO05D008263 8.7e-16 87.4 96 43.8
Manes.03G057500 Manihot esculenta HOM05D006497 ORTHO05D008263 3.6e-14 82.0 53 66.0
Gohir.D07G023800 Gossypium hirsutum HOM05D006497 ORTHO05D008263 1.2e-12 77.0 68 54.4
Cre08.g364650 Chlamydomonas reinhardtii HOM05D001184 ORTHO05D007940 1.7e-11 73.2 88 37.5
MCO07G547 Micromonas commoda HOM05D001184 ORTHO05D007940 2.1e-09 66.2 96 39.6
PRCOL_00005999 Prasinoderma coloniale HOM05D006497 ORTHO05D008263 2.1e-09 66.2 96 33.3
Rhsim07G0144900 Rhododendron simsii HOM05D006497 ORTHO05D008263 3.3e-07 58.9 43 72.1


User provided reference genes

Program Settings