Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0749G052 Amborella trichopoda HOM05D006545 ORTHO05D007985 1.5e-34 149.1 79 100.0
Dinv42321 Davidia involucrata HOM05D006545 ORTHO05D007985 8.7e-27 123.2 79 77.2
TAR383G1000 Trochodendron aralioides HOM05D006545 ORTHO05D007985 1.9e-26 122.1 78 76.9
GSVIVG01015199001 Vitis vinifera HOM05D006545 ORTHO05D007985 2.5e-26 121.7 79 77.2
Actinidia29903 Actinidia chinensis HOM05D000085 ORTHO05D001460 3.3e-26 121.3 79 77.2
Dinv36770 Davidia involucrata HOM05D006545 ORTHO05D007985 1.6e-25 119.0 79 74.7
MBI04_g31162_MAGBIO Magnolia biondii HOM05D006545 ORTHO05D007985 2.1e-25 118.6 79 77.2
MSTRG.10562 Avicennia marina HOM05D006545 ORTHO05D007985 3.6e-25 117.9 79 73.4
HanXRQChr12g0363181 Helianthus annuus HOM05D006545 ORTHO05D007985 3.6e-25 117.9 79 75.9
Nn8g38862 Nelumbo nucifera HOM05D006545 ORTHO05D007985 4.7e-25 117.5 79 75.9
Cc06_g11430 Coffea canephora HOM05D006545 ORTHO05D007985 6.2e-25 117.1 79 74.7
Gohir.A13G193400 Gossypium hirsutum HOM05D006545 ORTHO05D007985 6.2e-25 117.1 79 74.7
PSO832G3375 Papaver somniferum HOM05D006545 ORTHO05D007985 8.1e-25 116.7 79 74.7
Migut.L01494 Erythranthe guttata HOM05D006545 ORTHO05D007985 1.1e-24 116.3 79 70.9
PGSC0003DMG400000279 Solanum tuberosum HOM05D006545 ORTHO05D007985 1.1e-24 116.3 79 74.7
Actinidia19138 Actinidia chinensis HOM05D006545 ORTHO05D007985 1.4e-24 115.9 79 74.7
PSO063G6244 Papaver somniferum HOM05D006545 ORTHO05D007985 1.4e-24 115.9 79 74.7
PGR102G1056 Punica granatum HOM05D006545 ORTHO05D007985 1.4e-24 115.9 79 74.7
Lsat_1_v5_gn_7_37040 Lactuca sativa HOM05D006545 ORTHO05D007985 1.8e-24 115.5 76 76.3
Solyc12g008860.3 Solanum lycopersicum HOM05D006545 ORTHO05D007985 1.8e-24 115.5 79 73.4
Sopen12g003790 Solanum pennellii HOM05D006545 ORTHO05D007985 1.8e-24 115.5 79 73.4
vmacro06292 Vaccinium macrocarpon HOM05D006545 ORTHO05D007985 1.8e-24 115.5 79 72.2
Gohir.D13G199200 Gossypium hirsutum HOM05D006545 ORTHO05D007985 2.4e-24 115.2 79 73.4
unitig_85.g27258 Utricularia gibba HOM05D006545 ORTHO05D007985 2.4e-24 115.2 79 74.7
Cfa003081 Carpinus fangiana HOM05D000085 ORTHO05D001460 3.1e-24 114.8 79 75.9
Ciclev10010087m.g Citrus clementina HOM05D006545 ORTHO05D007985 3.1e-24 114.8 79 75.9
RcHm_v2.0_Chr2g0093401 Rosa chinensis HOM05D006545 ORTHO05D007985 3.1e-24 114.8 79 75.9
CsaV3_1G040450 Cucumis sativus L. HOM05D006545 ORTHO05D007985 4.0e-24 114.4 79 74.7
Duzib150G0099 Durio zibethinus HOM05D006545 ORTHO05D007985 4.0e-24 114.4 79 72.2
Duzib168G1224 Durio zibethinus HOM05D006545 ORTHO05D007985 4.0e-24 114.4 79 70.9
CiPaw.04G149100 Carya illinoinensis HOM05D006545 ORTHO05D007985 5.2e-24 114.0 79 74.7
CDE06G0764 Ceratophyllum demersum HOM05D006545 ORTHO05D007985 5.2e-24 114.0 79 73.4
CDE07G1614 Ceratophyllum demersum HOM05D006545 ORTHO05D007985 5.2e-24 114.0 79 73.4
MELO3C015473.2 Cucumis melo HOM05D006545 ORTHO05D007985 6.9e-24 113.6 74 75.7
QL02p062521 Quercus lobata HOM05D006545 ORTHO05D007985 6.9e-24 113.6 78 74.4
ClCG03G015590 Citrullus lanatus HOM05D006545 ORTHO05D007985 9.0e-24 113.2 79 72.2
Gohir.A05G030100 Gossypium hirsutum HOM05D006545 ORTHO05D007985 9.0e-24 113.2 79 70.9
Gohir.D05G031500 Gossypium hirsutum HOM05D006545 ORTHO05D007985 9.0e-24 113.2 79 70.9
Gorai.009G031700 Gossypium raimondii HOM05D006545 ORTHO05D007985 9.0e-24 113.2 79 70.9
Thecc.09G088900 Theobroma cacao HOM05D006545 ORTHO05D007985 9.0e-24 113.2 79 70.9
CiPaw.03G215100 Carya illinoinensis HOM05D006545 ORTHO05D007985 1.2e-23 112.8 79 73.4
DCAR_028856 Daucus carota HOM05D006545 ORTHO05D007985 1.2e-23 112.8 76 73.7
DCAR_032235 Daucus carota HOM05D006545 ORTHO05D007985 1.2e-23 112.8 76 73.7
FvH4_1g07510 Fragaria vesca HOM05D006545 ORTHO05D007985 1.2e-23 112.8 79 74.7
FAN19G0384 Fragaria x ananassa HOM05D006545 ORTHO05D007985 1.2e-23 112.8 79 74.7
FAN23G2021 Fragaria x ananassa HOM05D006545 ORTHO05D007985 1.2e-23 112.8 79 74.7
FAN26G0590 Fragaria x ananassa HOM05D006545 ORTHO05D007985 1.2e-23 112.8 79 74.7
Gorai.013G227700 Gossypium raimondii HOM05D006545 ORTHO05D007985 1.2e-23 112.8 79 72.2
EL10Ac8g19212 Beta vulgaris HOM05D006545 ORTHO05D007985 1.5e-23 112.5 79 73.4
CANSAT56G1499 Cannabis sativa HOM05D006545 ORTHO05D007985 1.5e-23 112.5 79 74.7
CANSAT56G4473 Cannabis sativa HOM05D006545 ORTHO05D007985 1.5e-23 112.5 79 74.7
Nitab4.5_0000540g0270 Nicotiana tabacum HOM05D006545 ORTHO05D007985 2.0e-23 112.1 79 72.2
unitig_699.g19296 Utricularia gibba HOM05D006545 ORTHO05D007985 2.0e-23 112.1 79 69.6
Ah.09g228260 Amaranthus hybridus HOM05D006545 ORTHO05D007985 3.4e-23 111.3 79 72.2
Potri.004G215200 Populus trichocarpa HOM05D006545 ORTHO05D007985 4.4e-23 110.9 79 70.9
ECA240G1755 Erigeron canadensis HOM05D006545 ORTHO05D007985 5.8e-23 110.5 76 72.4
Lj4g0002489 Lotus japonicus HOM05D006545 ORTHO05D007985 5.8e-23 110.5 79 72.2
Glyma.13G104200 Glycine max HOM05D006545 ORTHO05D007985 7.6e-23 110.2 79 72.2
Glyma.17G054900 Glycine max HOM05D006545 ORTHO05D007985 7.6e-23 110.2 79 72.2
Nitab4.5_0008523g0040 Nicotiana tabacum HOM05D006545 ORTHO05D007985 7.6e-23 110.2 79 72.2
Manes.03G034000 Manihot esculenta HOM05D006545 ORTHO05D007985 9.9e-23 109.8 76 72.4
Phvul.003G136800 Phaseolus vulgaris HOM05D006545 ORTHO05D007985 9.9e-23 109.8 79 72.2
CARHR237610 Cardamine hirsuta HOM05D006545 ORTHO05D007985 1.3e-22 109.4 76 73.7
THA.LOC104820022 Tarenaya hassleriana HOM05D006545 ORTHO05D007985 1.3e-22 109.4 76 73.7
Atru.chr7.1592 Acer truncatum HOM05D006545 ORTHO05D007985 2.9e-22 108.2 79 70.9
Sc18g0002090 Simmondsia chinensis HOM05D000085 ORTHO05D001460 2.9e-22 108.2 78 69.2
TWI34G0024 Tripterygium wilfordii HOM05D006545 ORTHO05D007985 2.9e-22 108.2 79 72.2
Manes.16G101800 Manihot esculenta HOM05D006545 ORTHO05D007985 4.9e-22 107.5 76 71.1
BcaNung00485 Brassica carinata HOM05D006545 ORTHO05D007985 6.4e-22 107.1 76 73.7
PSO210G4511 Papaver somniferum HOM05D006545 ORTHO05D007985 6.4e-22 107.1 79 70.9
Sp7g27510 Schrenkiella parvula HOM05D006545 ORTHO05D007985 6.4e-22 107.1 76 72.4
AL7G22570 Arabidopsis lyrata HOM05D006545 ORTHO05D007985 8.4e-22 106.7 76 72.4
Carub.0007s1077 Capsella rubella HOM05D006545 ORTHO05D007985 8.4e-22 106.7 76 72.4
Eucgr.C00895 Eucalyptus grandis HOM05D006545 ORTHO05D007985 1.1e-21 106.3 74 71.6
PSO210G2413 Papaver somniferum HOM05D006545 ORTHO05D007985 1.1e-21 106.3 79 70.9
Potri.006G146800 Populus trichocarpa HOM05D006545 ORTHO05D007985 1.1e-21 106.3 79 68.4
TWI63G0169 Tripterygium wilfordii HOM05D006545 ORTHO05D007985 1.1e-21 106.3 79 70.9
Zm00001eb383910 Zea mays HOM05D006545 ORTHO05D007985 1.1e-21 106.3 76 69.7
Prupe.7G209400 Prunus persica HOM05D006545 ORTHO05D007985 1.4e-21 105.9 79 70.9
AT4G29735 Arabidopsis thaliana HOM05D006545 ORTHO05D007985 1.9e-21 105.5 76 71.1
Thhalv10026717m.g Eutrema salsugineum HOM05D006545 ORTHO05D007985 2.4e-21 105.1 76 71.1
Sed0026852 Sechium edule HOM05D006545 ORTHO05D007985 3.2e-21 104.8 79 68.4
THA.LOC104814622 Tarenaya hassleriana HOM05D006545 ORTHO05D007985 3.2e-21 104.8 75 70.7
AUR62033964 Chenopodium quinoa HOM05D006545 ORTHO05D007985 4.2e-21 104.4 78 70.5
Lalb_Chr07g0180851 Lupinus albus HOM05D006545 ORTHO05D007985 4.2e-21 104.4 76 68.4
Sabra06G0115900 Salix brachista HOM05D006545 ORTHO05D007985 4.2e-21 104.4 79 67.1
Os06g0567000 Oryza sativa ssp. japonica HOM05D006545 ORTHO05D007985 5.4e-21 104.0 76 67.1
A03p59030 Brassica napus HOM05D006545 ORTHO05D007985 7.1e-21 103.6 76 69.7
Psat4g015120 Pisum sativum HOM05D006545 ORTHO05D007985 7.1e-21 103.6 76 68.4
Ca_21279_v3 Cicer arietinum L. HOM05D005251 ORTHO05D006680 9.3e-21 103.2 79 68.4
C03p89150 Brassica napus HOM05D006545 ORTHO05D007985 1.2e-20 102.8 76 69.7
AUR62029070 Chenopodium quinoa HOM05D006545 ORTHO05D007985 1.2e-20 102.8 78 69.2
Lalb_Chr13g0299701 Lupinus albus HOM05D006545 ORTHO05D007985 1.2e-20 102.8 76 67.1
Aa31LG2G20830 Aethionema arabicum HOM05D006545 ORTHO05D007985 1.6e-20 102.4 76 68.4
Zm00001eb277360 Zea mays HOM05D006545 ORTHO05D007985 1.6e-20 102.4 75 66.7
BcaC01g01182 Brassica carinata HOM05D006545 ORTHO05D007985 2.7e-20 101.7 76 69.7
Nitab4.5_0006552g0040 Nicotiana tabacum HOM05D006545 ORTHO05D007985 3.5e-20 101.3 75 69.3
Aqoxy7G01208 Aquilegia oxysepala HOM05D006545 ORTHO05D007985 4.6e-20 100.9 78 64.1
arahy.Tifrunner.gnm1.ann1.CH1R66 Arachis hypogaea HOM05D006545 ORTHO05D007985 6.0e-20 100.5 79 67.1
arahy.Tifrunner.gnm1.ann1.S1CX09 Arachis hypogaea HOM05D006545 ORTHO05D007985 6.0e-20 100.5 79 67.1
Medtr4g126270 Medicago truncatula HOM05D000085 ORTHO05D001460 6.0e-20 100.5 79 65.8
arahy.Tifrunner.gnm1.ann1.MQ59WG Arachis hypogaea HOM05D000085 ORTHO05D001460 1.3e-19 99.4 74 67.6
Mapoly0003s0235 Marchantia polymorpha HOM05D006545 ORTHO05D007985 1.7e-19 99.0 79 65.8
TPR.G9474 Trifolium pratense HOM05D000085 ORTHO05D001460 1.7e-19 99.0 76 67.1
A01p08390 Brassica napus HOM05D000125 ORTHO05D000120 5.1e-19 97.4 76 67.1
BraA01t00787Z Brassica rapa HOM05D000125 ORTHO05D000120 5.1e-19 97.4 76 67.1
MD02G1079700 Malus domestica HOM05D006545 ORTHO05D007985 5.1e-19 97.4 76 64.5
BcaC09g51752 Brassica carinata HOM05D006545 ORTHO05D007985 1.9e-18 95.5 76 67.1
TAR624G0377 Trochodendron aralioides HOM05D002302 ORTHO05D002728 1.9e-18 95.5 68 67.6
Pp3c11_23220 Physcomitrium patens HOM05D006545 ORTHO05D007985 4.3e-18 94.4 73 68.5
MD15G1207400 Malus domestica HOM05D006545 ORTHO05D007985 1.3e-17 92.8 79 60.8
BraA03t14963Z Brassica rapa HOM05D006545 ORTHO05D007985 2.1e-17 92.0 98 55.1
Nitab4.5_0004526g0070 Nicotiana tabacum HOM05D006545 ORTHO05D007985 2.1e-17 92.0 63 74.6
SMO361G0088 Selaginella moellendorffii HOM05D006545 ORTHO05D007985 3.6e-17 91.3 75 62.7
Nitab4.5_0004223g0010 Nicotiana tabacum HOM05D006545 ORTHO05D007985 4.8e-17 90.9 63 73.0
HPP92_008778 Vanilla planifolia HOM05D006545 ORTHO05D007985 1.1e-16 89.7 63 73.0
C07p57080 Brassica napus HOM05D006545 ORTHO05D007985 1.4e-16 89.4 63 73.0
COL.COLO4_18197 Corchorus olitorius HOM05D002302 ORTHO05D002728 1.4e-16 89.4 68 61.8
FAN26G2289 Fragaria x ananassa HOM05D006545 ORTHO05D007985 3.1e-16 88.2 65 67.7
BolC7t46179H Brassica oleracea HOM05D006545 ORTHO05D007985 4.0e-16 87.8 102 52.0
SalBow5G5008 Salvia bowleyana HOM05D006545 ORTHO05D007985 9.0e-16 86.7 62 71.0
BcaC09g52224 Brassica carinata HOM05D006545 ORTHO05D007985 4.5e-15 84.3 63 69.8
C01p09720 Brassica napus HOM05D006545 ORTHO05D007985 1.7e-14 82.4 98 51.0
HanXRQChr12g0377121 Helianthus annuus HOM05D006545 ORTHO05D007985 2.4e-13 78.6 56 71.4
Nitab4.5_0000095g0160 Nicotiana tabacum HOM05D006545 ORTHO05D007985 2.4e-13 78.6 74 58.1
C01p09580 Brassica napus HOM05D000125 ORTHO05D007985 7.1e-13 77.0 63 68.3
Rhsim03G0232100 Rhododendron simsii HOM05D000004 ORTHO05D007985 3.9e-11 71.2 47 80.9
C01p09620 Brassica napus HOM05D006545 ORTHO05D007985 3.3e-10 68.2 96 49.0
A08p19550 Brassica napus HOM05D006545 ORTHO05D007985 2.1e-09 65.5 51 68.6
Pp3c7_2400 Physcomitrium patens HOM05D006545 ORTHO05D007985 1.4e-08 62.8 128 36.7
Lj7C676T8 Lonicera japonica HOM05D006545 ORTHO05D007985 3.1e-08 61.6 37 83.8
BcaB03g12615 Brassica carinata HOM05D006545 ORTHO05D007985 6.9e-08 60.5 47 63.8


User provided reference genes

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