Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0749G041 Amborella trichopoda HOM05D000714 ORTHO05D000544 2.3e-69 265.4 131 100.0
ATR0665G139 Amborella trichopoda HOM05D000714 ORTHO05D000544 1.4e-21 106.7 79 67.1
Haze_01202 Corylus avellana HOM05D000714 ORTHO05D000544 1.3e-11 73.6 87 43.7
CiPaw.01G148700 Carya illinoinensis HOM05D000714 ORTHO05D000544 2.2e-11 72.8 92 40.2
Cfa015384 Carpinus fangiana HOM05D000714 ORTHO05D000544 6.5e-11 71.2 87 42.5
Nn4g25840 Nelumbo nucifera HOM05D000714 ORTHO05D000544 1.1e-10 70.5 94 39.4
QL06p008893 Quercus lobata HOM05D000714 ORTHO05D000544 1.1e-10 70.5 93 38.7
CiPaw.02G082900 Carya illinoinensis HOM05D000714 ORTHO05D000544 2.1e-09 66.2 88 40.9
Dinv44381 Davidia involucrata HOM05D000714 ORTHO05D000544 2.7e-09 65.9 93 36.6
TAR362G0301 Trochodendron aralioides HOM05D000714 ORTHO05D000544 4.6e-09 65.1 89 41.6
TAR365G1086 Trochodendron aralioides HOM05D000714 ORTHO05D000544 6.1e-09 64.7 86 39.5
Gohir.D11G120100 Gossypium hirsutum HOM05D000714 ORTHO05D000544 7.9e-09 64.3 84 39.3
CANSAT78G0801 Cannabis sativa HOM05D000714 ORTHO05D000544 1.0e-08 63.9 89 39.3
Dinv19714 Davidia involucrata HOM05D000714 ORTHO05D000544 1.0e-08 63.9 89 36.0
Dinv29742 Davidia involucrata HOM05D000714 ORTHO05D000544 1.3e-08 63.5 95 34.7
FAN20G0884 Fragaria x ananassa HOM05D000714 ORTHO05D000544 1.3e-08 63.5 70 47.1
Prupe.8G258300 Prunus persica HOM05D000714 ORTHO05D000544 1.8e-08 63.2 89 34.8
Manes.15G012300 Manihot esculenta HOM05D000714 ORTHO05D000544 2.3e-08 62.8 95 35.8
Sed0008273 Sechium edule HOM05D000714 ORTHO05D000544 2.3e-08 62.8 92 38.0
Cfa005856 Carpinus fangiana HOM05D000714 ORTHO05D000544 3.9e-08 62.0 95 38.9
FAN15G3001 Fragaria x ananassa HOM05D000714 ORTHO05D000544 3.9e-08 62.0 72 47.2
COL.COLO4_23372 Corchorus olitorius HOM05D000714 ORTHO05D000544 5.1e-08 61.6 96 36.5
Aqoxy5G00720 Aquilegia oxysepala HOM05D000714 ORTHO05D000544 6.7e-08 61.2 89 38.2
Manes.03G195200 Manihot esculenta HOM05D000714 ORTHO05D000544 6.7e-08 61.2 95 35.8
THA.LOC104802167 Tarenaya hassleriana HOM05D000714 ORTHO05D000544 6.7e-08 61.2 96 34.4
CSS0017299 Camellia sinensis var. sinensis HOM05D000714 ORTHO05D000544 8.7e-08 60.8 95 35.8
CSS0043602 Camellia sinensis var. sinensis HOM05D000714 ORTHO05D000544 8.7e-08 60.8 95 35.8
CARHR250800 Cardamine hirsuta HOM05D000714 ORTHO05D000544 8.7e-08 60.8 99 33.3
FAN27G2984 Fragaria x ananassa HOM05D000714 ORTHO05D000544 8.7e-08 60.8 72 45.8
RcHm_v2.0_Chr6g0293591 Rosa chinensis HOM05D000714 ORTHO05D000544 8.7e-08 60.8 91 36.3
THA.LOC104801267 Tarenaya hassleriana HOM05D000714 ORTHO05D000544 8.7e-08 60.8 102 33.3
Carub.0006s3463 Capsella rubella HOM05D000714 ORTHO05D000544 1.1e-07 60.5 99 33.3
Cpa.g.sc9.211 Carica papaya HOM05D000714 ORTHO05D000544 1.1e-07 60.5 99 31.3
CDE08G1340 Ceratophyllum demersum HOM05D000714 ORTHO05D000544 1.1e-07 60.5 87 39.1
FvH4_2g25410 Fragaria vesca HOM05D000714 ORTHO05D000544 1.1e-07 60.5 72 45.8
AT4G02500 Arabidopsis thaliana HOM05D000714 ORTHO05D000544 1.5e-07 60.1 100 33.0
EL10Ac3g06600 Beta vulgaris HOM05D000714 ORTHO05D000544 1.5e-07 60.1 63 44.4
CDE02G2088 Ceratophyllum demersum HOM05D000714 ORTHO05D000544 1.5e-07 60.1 87 39.1
FAN24G1663 Fragaria x ananassa HOM05D000714 ORTHO05D000544 1.5e-07 60.1 72 44.4
PGR044G1167 Punica granatum HOM05D000714 ORTHO05D000544 1.5e-07 60.1 99 34.3
Actinidia00025 Actinidia chinensis HOM05D000714 ORTHO05D000544 1.9e-07 59.7 91 37.4
AL6G50540 Arabidopsis lyrata HOM05D000714 ORTHO05D000544 2.5e-07 59.3 102 32.4
Duzib212G0024 Durio zibethinus HOM05D000714 ORTHO05D000544 2.5e-07 59.3 91 37.4
Thecc.04G284800 Theobroma cacao HOM05D000714 ORTHO05D000544 2.5e-07 59.3 86 38.4
A02p24790 Brassica napus HOM05D000714 ORTHO05D000544 3.3e-07 58.9 99 32.3
BraA02t07468Z Brassica rapa HOM05D000714 ORTHO05D000544 3.3e-07 58.9 99 32.3
MD03G1285400 Malus domestica HOM05D000714 ORTHO05D000544 3.3e-07 58.9 88 37.5
CSS0020780 Camellia sinensis var. sinensis HOM05D000714 ORTHO05D000544 4.3e-07 58.5 100 34.0
Gorai.007G128800 Gossypium raimondii HOM05D000714 ORTHO05D000544 4.3e-07 58.5 100 33.0
Lj6P676T16 Lonicera japonica HOM05D000714 ORTHO05D000544 4.3e-07 58.5 64 43.8
BcaC03g16137 Brassica carinata HOM05D000714 ORTHO05D000544 5.7e-07 58.2 100 32.0
BcaC07g42727 Brassica carinata HOM05D000714 ORTHO05D000544 5.7e-07 58.2 98 35.7
A09p01950 Brassica napus HOM05D000714 ORTHO05D000544 5.7e-07 58.2 96 32.3
C02p39370 Brassica napus HOM05D000714 ORTHO05D000544 5.7e-07 58.2 100 32.0
BolC2t09947H Brassica oleracea HOM05D000714 ORTHO05D000544 5.7e-07 58.2 100 32.0
MBI01_g09374_MAGBIO Magnolia biondii HOM05D000714 ORTHO05D000544 5.7e-07 58.2 86 39.5
BcaB05g23637 Brassica carinata HOM05D000714 ORTHO05D000544 7.4e-07 57.8 99 32.3
MELO3C006664.2 Cucumis melo HOM05D000714 ORTHO05D000544 7.4e-07 57.8 96 34.4
CsaV3_3G014630 Cucumis sativus L. HOM05D000714 ORTHO05D000544 7.4e-07 57.8 96 34.4
DCAR_025348 Daucus carota HOM05D000714 ORTHO05D000544 7.4e-07 57.8 90 34.4
Duzib138G0825 Durio zibethinus HOM05D000714 ORTHO05D000544 7.4e-07 57.8 98 34.7
Thhalv10028641m.g Eutrema salsugineum HOM05D000714 ORTHO05D000544 7.4e-07 57.8 103 33.0
Sp6g02410 Schrenkiella parvula HOM05D000714 ORTHO05D000544 7.4e-07 57.8 103 33.0
TWI09G1574 Tripterygium wilfordii HOM05D000714 ORTHO05D000544 7.4e-07 57.8 97 36.1
vmacro08151 Vaccinium macrocarpon HOM05D000714 ORTHO05D000544 7.4e-07 57.8 90 33.3
Rhsim04G0221800 Rhododendron simsii HOM05D000714 ORTHO05D000544 9.7e-07 57.4 82 40.2
Ah.07g200910 Amaranthus hybridus HOM05D000714 ORTHO05D000544 1.3e-06 57.0 103 34.0
BraA09t35845Z Brassica rapa HOM05D000714 ORTHO05D000544 1.3e-06 57.0 94 31.9
Gohir.A11G115100 Gossypium hirsutum HOM05D000714 ORTHO05D000544 1.3e-06 57.0 100 32.0
Aa31LG5G2130 Aethionema arabicum HOM05D000714 ORTHO05D000544 1.6e-06 56.6 97 32.0
BcaC01g06752 Brassica carinata HOM05D000714 ORTHO05D000544 1.6e-06 56.6 98 31.6
BcaC01g06753 Brassica carinata HOM05D000714 ORTHO05D000544 1.6e-06 56.6 98 31.6
C03p37820 Brassica napus HOM05D000714 ORTHO05D000544 1.6e-06 56.6 98 31.6
BolC3t16071H Brassica oleracea HOM05D000714 ORTHO05D000544 1.6e-06 56.6 98 31.6
COL.COLO4_13870 Corchorus olitorius HOM05D000714 ORTHO05D000544 1.6e-06 56.6 97 35.1
Potri.008G208000 Populus trichocarpa HOM05D000714 ORTHO05D000544 1.6e-06 56.6 80 35.0
Sabra08G0153400 Salix brachista HOM05D000714 ORTHO05D000544 1.6e-06 56.6 77 36.4
A03p31030 Brassica napus HOM05D000714 ORTHO05D000544 2.2e-06 56.2 99 31.3
Gohir.D02G054500 Gossypium hirsutum HOM05D000714 ORTHO05D000544 2.2e-06 56.2 93 36.6
Gorai.005G060400 Gossypium raimondii HOM05D000714 ORTHO05D000544 2.2e-06 56.2 93 36.6
Nitab4.5_0003546g0020 Nicotiana tabacum HOM05D000714 ORTHO05D000544 2.2e-06 56.2 99 37.4
Rhsim04G0221900 Rhododendron simsii HOM05D000714 ORTHO05D000544 2.2e-06 56.2 53 50.9
C09p02040 Brassica napus HOM05D000714 ORTHO05D000544 2.8e-06 55.8 97 30.9
BraA03t12279Z Brassica rapa HOM05D000714 ORTHO05D000544 2.8e-06 55.8 98 31.6
FAN12G0434 Fragaria x ananassa HOM05D000714 ORTHO05D000544 3.7e-06 55.5 92 38.0
GSVIVG01027978001 Vitis vinifera HOM05D000714 ORTHO05D000544 3.7e-06 55.5 56 48.2
PSO832G0269 Papaver somniferum HOM05D000714 ORTHO05D000544 4.8e-06 55.1 75 41.3
PSO832G2847 Papaver somniferum HOM05D000714 ORTHO05D000544 4.8e-06 55.1 90 37.8
Rhsim04G0222200 Rhododendron simsii HOM05D000714 ORTHO05D000544 4.8e-06 55.1 53 50.9
GSVIVG01017760001 Vitis vinifera HOM05D000714 ORTHO05D000544 4.8e-06 55.1 59 42.4
MD11G1304800 Malus domestica HOM05D000714 ORTHO05D000544 6.3e-06 54.7 89 33.7
PSO210G3163 Papaver somniferum HOM05D000714 ORTHO05D000544 6.3e-06 54.7 75 41.3
Prupe.1G136700 Prunus persica HOM05D000714 ORTHO05D000544 6.3e-06 54.7 95 37.9
Aa31LG10G16650 Aethionema arabicum HOM05D000714 ORTHO05D000544 8.2e-06 54.3 100 34.0
Ciclev10004948m.g Citrus clementina HOM05D000714 ORTHO05D000544 8.2e-06 54.3 89 36.0
Eucgr.B01313 Eucalyptus grandis HOM05D000714 ORTHO05D000544 8.2e-06 54.3 77 36.4
Thhalv10005949m.g Eutrema salsugineum HOM05D000714 ORTHO05D000544 8.2e-06 54.3 99 34.3
Nitab4.5_0000191g0120 Nicotiana tabacum HOM05D000714 ORTHO05D000544 8.2e-06 54.3 101 35.6
PSO210G1878 Papaver somniferum HOM05D000714 ORTHO05D000544 8.2e-06 54.3 89 33.7
Potri.010G025300 Populus trichocarpa HOM05D000714 ORTHO05D000544 8.2e-06 54.3 95 30.5
Sp5g00800 Schrenkiella parvula HOM05D000714 ORTHO05D000544 8.2e-06 54.3 99 33.3
Thecc.01G297400 Theobroma cacao HOM05D000714 ORTHO05D000544 8.2e-06 54.3 100 30.0


User provided reference genes

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