Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0745G076 Amborella trichopoda HOM05D000462 ORTHO05D064266 2.1e-57 225.7 112 100.0
Phvul.009G177600 Phaseolus vulgaris HOM05D000462 ORTHO05D002607 9.0e-08 60.8 67 55.2
Atru.chr9.2490 Acer truncatum HOM05D000462 ORTHO05D002607 1.5e-07 60.1 67 55.2
ATR1091G082 Amborella trichopoda HOM05D000462 ORTHO05D002607 1.5e-07 60.1 62 61.3
DCAR_021571 Daucus carota HOM05D000462 ORTHO05D002607 1.5e-07 60.1 65 58.5
Glyma.04G184300 Glycine max HOM05D000462 ORTHO05D002607 1.5e-07 60.1 67 58.2
Solyc03g112870.3 Solanum lycopersicum HOM05D000462 ORTHO05D002607 1.5e-07 60.1 67 56.7
Sopen03g031950 Solanum pennellii HOM05D000462 ORTHO05D002607 1.5e-07 60.1 67 56.7
PGSC0003DMG400018150 Solanum tuberosum HOM05D000462 ORTHO05D002607 1.5e-07 60.1 67 56.7
CSS0025053 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D002607 2.0e-07 59.7 67 56.7
CANSAT80G1497 Cannabis sativa HOM05D000462 ORTHO05D002607 2.0e-07 59.7 65 56.9
Glyma.06G181600 Glycine max HOM05D000462 ORTHO05D002607 2.0e-07 59.7 67 56.7
MBI10_g28001_MAGBIO Magnolia biondii HOM05D000462 ORTHO05D002607 2.0e-07 59.7 91 45.1
Nitab4.5_0000514g0110 Nicotiana tabacum HOM05D000462 ORTHO05D002607 2.0e-07 59.7 67 56.7
Nitab4.5_0002403g0090 Nicotiana tabacum HOM05D000462 ORTHO05D002607 2.0e-07 59.7 67 56.7
THA.LOC104808313 Tarenaya hassleriana HOM05D000462 ORTHO05D002607 2.0e-07 59.7 67 58.2
VMungo1309G2349 Vigna mungo HOM05D000462 ORTHO05D002607 2.0e-07 59.7 67 56.7
CAN.G1305.33 Capsicum annuum HOM05D000462 ORTHO05D002607 2.6e-07 59.3 67 56.7
DCAR_026143 Daucus carota HOM05D000462 ORTHO05D002607 2.6e-07 59.3 67 56.7
Lalb_Chr23g0273271 Lupinus albus HOM05D000462 ORTHO05D002607 2.6e-07 59.3 67 56.7
Peaxi162Scf00089g01842 Petunia axillaris HOM05D000462 ORTHO05D002607 2.6e-07 59.3 67 56.7
SGA_v2.0_scaffold114G31827 Striga asiatica HOM05D000462 ORTHO05D002607 2.6e-07 59.3 67 56.7
SGA_v2.0_scaffold7G04143 Striga asiatica HOM05D000462 ORTHO05D002607 2.6e-07 59.3 67 56.7
HanXRQChr05g0149571 Helianthus annuus HOM05D000462 ORTHO05D002607 3.4e-07 58.9 67 56.7
HanXRQChr05g0155751 Helianthus annuus HOM05D000462 ORTHO05D002607 3.4e-07 58.9 67 56.7
Lsat_1_v5_gn_5_14941 Lactuca sativa HOM05D000462 ORTHO05D002607 3.4e-07 58.9 67 56.7
Nn3g16830 Nelumbo nucifera HOM05D000462 ORTHO05D002607 3.4e-07 58.9 67 56.7
Rhsim12G0165000 Rhododendron simsii HOM05D000462 ORTHO05D002607 3.4e-07 58.9 67 56.7
vmacro16615 Vaccinium macrocarpon HOM05D000462 ORTHO05D002607 3.4e-07 58.9 67 56.7
Ca_16167_v3 Cicer arietinum L. HOM05D000462 ORTHO05D002607 4.5e-07 58.5 65 55.4
Migut.D01943 Erythranthe guttata HOM05D000462 ORTHO05D002607 4.5e-07 58.5 67 56.7
Lalb_Chr13g0297741 Lupinus albus HOM05D000462 ORTHO05D002607 4.5e-07 58.5 67 55.2
Prupe.5G172100 Prunus persica HOM05D000462 ORTHO05D002607 4.5e-07 58.5 67 55.2
Actinidia19101 Actinidia chinensis HOM05D000462 ORTHO05D002607 5.8e-07 58.2 67 56.7
Aa31LG9G17980 Aethionema arabicum HOM05D000462 ORTHO05D002607 5.8e-07 58.2 67 56.7
CSS0038693 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D002607 5.8e-07 58.2 67 56.7
MD06G1172800 Malus domestica HOM05D000462 ORTHO05D002607 5.8e-07 58.2 67 55.2
Potri.012G082100 Populus trichocarpa HOM05D000462 ORTHO05D002607 5.8e-07 58.2 67 56.7
RcHm_v2.0_Chr7g0193401 Rosa chinensis HOM05D000462 ORTHO05D002607 5.8e-07 58.2 67 55.2
unitig_60.g25800 Utricularia gibba HOM05D000462 ORTHO05D002607 5.8e-07 58.2 62 58.1
Zm00001eb042970 Zea mays HOM05D000462 ORTHO05D002607 5.8e-07 58.2 67 53.7
arahy.Tifrunner.gnm1.ann1.6DZ4AC Arachis hypogaea HOM05D000462 ORTHO05D002607 7.6e-07 57.8 67 55.2
Ciclev10020405m.g Citrus clementina HOM05D000462 ORTHO05D002607 7.6e-07 57.8 61 59.0
CsaV3_1G008560 Cucumis sativus L. HOM05D000462 ORTHO05D002607 7.6e-07 57.8 67 56.7
FAN08G3107 Fragaria x ananassa HOM05D000462 ORTHO05D002607 7.6e-07 57.8 65 55.4
MD14G1178800 Malus domestica HOM05D000462 ORTHO05D002607 7.6e-07 57.8 67 55.2
Oeu035999.1 Olea europaea HOM05D000462 ORTHO05D002607 7.6e-07 57.8 67 56.7
Oeu040836.1 Olea europaea HOM05D000462 ORTHO05D002607 7.6e-07 57.8 67 56.7
TWI14G1248 Tripterygium wilfordii HOM05D000462 ORTHO05D002607 7.6e-07 57.8 61 59.0
arahy.Tifrunner.gnm1.ann1.YRX3D0 Arachis hypogaea HOM05D000462 ORTHO05D002607 1.0e-06 57.4 67 55.2
ClCG01G013200 Citrullus lanatus HOM05D000462 ORTHO05D002607 1.0e-06 57.4 67 56.7
MELO3C002270.2 Cucumis melo HOM05D000462 ORTHO05D002607 1.0e-06 57.4 67 55.2
ECA246G1454 Erigeron canadensis HOM05D000462 ORTHO05D002607 1.0e-06 57.4 62 58.1
FvH4_5g05430 Fragaria vesca HOM05D000462 ORTHO05D002607 1.0e-06 57.4 65 55.4
FAN04G1295 Fragaria x ananassa HOM05D000462 ORTHO05D002607 1.0e-06 57.4 65 55.4
FAN13G2525 Fragaria x ananassa HOM05D000462 ORTHO05D002607 1.0e-06 57.4 65 55.4
FAN18G4045 Fragaria x ananassa HOM05D000462 ORTHO05D002607 1.0e-06 57.4 65 55.4
FAN18G4327 Fragaria x ananassa HOM05D000462 ORTHO05D002607 1.0e-06 57.4 65 55.4
Gorai.001G071400 Gossypium raimondii HOM05D000462 ORTHO05D002607 1.0e-06 57.4 65 56.9
Hma1.2p1_0592F.1_g185410 Hydrangea macrophylla HOM05D000462 ORTHO05D002607 1.0e-06 57.4 65 55.4
Lj1g0001520 Lotus japonicus HOM05D000462 ORTHO05D002607 1.0e-06 57.4 67 55.2
Lalb_Chr08g0236571 Lupinus albus HOM05D000462 ORTHO05D002607 1.0e-06 57.4 67 55.2
Lalb_Chr12g0201641 Lupinus albus HOM05D000462 ORTHO05D002607 1.0e-06 57.4 65 55.4
PSO017G5517 Papaver somniferum HOM05D000462 ORTHO05D002607 1.0e-06 57.4 62 56.5
PSO478G2472 Papaver somniferum HOM05D000462 ORTHO05D002607 1.0e-06 57.4 62 56.5
Sed0003826 Sechium edule HOM05D000462 ORTHO05D002607 1.0e-06 57.4 67 53.7
unitig_0.g796 Utricularia gibba HOM05D000462 ORTHO05D002607 1.0e-06 57.4 67 53.7
CARHR217060 Cardamine hirsuta HOM05D000462 ORTHO05D002607 1.3e-06 57.0 67 55.2
Cfa019146 Carpinus fangiana HOM05D000462 ORTHO05D002607 1.3e-06 57.0 61 57.4
COL.COLO4_30062 Corchorus olitorius HOM05D000462 ORTHO05D002607 1.3e-06 57.0 65 56.9
Haze_07512 Corylus avellana HOM05D000462 ORTHO05D002607 1.3e-06 57.0 61 57.4
Dinv20642 Davidia involucrata HOM05D000462 ORTHO05D002607 1.3e-06 57.0 61 59.0
Migut.O00094 Erythranthe guttata HOM05D000462 ORTHO05D002607 1.3e-06 57.0 67 55.2
Gohir.D07G067900 Gossypium hirsutum HOM05D000462 ORTHO05D002607 1.3e-06 57.0 61 59.0
Hma1.2p1_2469F.1_g322700 Hydrangea macrophylla HOM05D000462 ORTHO05D002607 1.3e-06 57.0 65 56.9
Nitab4.5_0000025g0550 Nicotiana tabacum HOM05D000462 ORTHO05D002607 1.3e-06 57.0 67 55.2
Nitab4.5_0001724g0010 Nicotiana tabacum HOM05D000462 ORTHO05D002607 1.3e-06 57.0 67 55.2
Sp7g07560 Schrenkiella parvula HOM05D000462 ORTHO05D002607 1.3e-06 57.0 67 55.2
Sed0007708 Sechium edule HOM05D000462 ORTHO05D002607 1.3e-06 57.0 67 55.2
Hund02749 Selenicereus undatus HOM05D000462 ORTHO05D002607 1.3e-06 57.0 67 53.7
TPR.G25317 Trifolium pratense HOM05D000462 ORTHO05D002607 1.3e-06 57.0 65 53.8
GSVIVG01007730001 Vitis vinifera HOM05D000462 ORTHO05D002607 1.3e-06 57.0 62 56.5
MSTRG.23136 Avicennia marina HOM05D000462 ORTHO05D002607 1.7e-06 56.6 61 59.0
BcaC07g37694 Brassica carinata HOM05D000462 ORTHO05D002607 1.7e-06 56.6 67 55.2
A08p10040 Brassica napus HOM05D000462 ORTHO05D002607 1.7e-06 56.6 67 55.2
BolC8t48065H Brassica oleracea HOM05D000462 ORTHO05D002607 1.7e-06 56.6 67 55.2
BraA08t33000Z Brassica rapa HOM05D000462 ORTHO05D002607 1.7e-06 56.6 67 55.2
CiPaw.11G024900 Carya illinoinensis HOM05D000462 ORTHO05D002607 1.7e-06 56.6 61 59.0
Dinv38577 Davidia involucrata HOM05D000462 ORTHO05D002607 1.7e-06 56.6 61 57.4
Eucgr.K02835 Eucalyptus grandis HOM05D000462 ORTHO05D002607 1.7e-06 56.6 62 54.8
Gohir.A07G063200 Gossypium hirsutum HOM05D000462 ORTHO05D002607 1.7e-06 56.6 65 56.9
Manes.06G105900 Manihot esculenta HOM05D000462 ORTHO05D002607 1.7e-06 56.6 67 55.2
Manes.14G064800 Manihot esculenta HOM05D000462 ORTHO05D002607 1.7e-06 56.6 67 53.7
Medtr3g077640 Medicago truncatula HOM05D000462 ORTHO05D002607 1.7e-06 56.6 65 53.8
Os08g0344600 Oryza sativa ssp. japonica HOM05D000462 ORTHO05D002607 1.7e-06 56.6 67 53.7
Psat0ss3962g0320 Pisum sativum HOM05D000462 ORTHO05D002607 1.7e-06 56.6 65 53.8
SalBow6G1493 Salvia bowleyana HOM05D000462 ORTHO05D002607 1.7e-06 56.6 61 59.0
SalBow6G3291 Salvia bowleyana HOM05D000462 ORTHO05D002607 1.7e-06 56.6 61 59.0
SMO137G0040 Selaginella moellendorffii HOM05D000462 ORTHO05D002607 1.7e-06 56.6 69 52.2
Sc12g0005260 Simmondsia chinensis HOM05D000462 ORTHO05D002607 1.7e-06 56.6 67 55.2
SGA_v2.0_scaffold625G53244 Striga asiatica HOM05D000462 ORTHO05D402713 1.7e-06 56.6 67 49.3
Thecc.03G013900 Theobroma cacao HOM05D000462 ORTHO05D002607 1.7e-06 56.6 61 59.0
vmacro19396 Vaccinium macrocarpon HOM05D000462 ORTHO05D002607 1.7e-06 56.6 67 55.2
BcaB04g18079 Brassica carinata HOM05D000462 ORTHO05D002607 2.2e-06 56.2 65 55.4
Lj9C447T2 Lonicera japonica HOM05D000462 ORTHO05D002607 2.2e-06 56.2 67 53.7
Potri.015G077900 Populus trichocarpa HOM05D000462 ORTHO05D002607 2.2e-06 56.2 67 55.2
PGR044G2621 Punica granatum HOM05D000462 ORTHO05D002607 2.2e-06 56.2 62 56.5
Rhsim08G0173600 Rhododendron simsii HOM05D000462 ORTHO05D002607 2.2e-06 56.2 67 55.2
Sabra15G0102500 Salix brachista HOM05D000462 ORTHO05D002607 2.2e-06 56.2 67 55.2
SalBow5G0429 Salvia bowleyana HOM05D000462 ORTHO05D002607 2.2e-06 56.2 67 52.2
SalBow5G0477 Salvia bowleyana HOM05D000462 ORTHO05D002607 2.2e-06 56.2 67 52.2
Zm00001eb097690 Zea mays HOM05D000462 ORTHO05D002607 2.2e-06 56.2 67 53.7
Zm00001eb309230 Zea mays HOM05D000462 ORTHO05D002607 2.2e-06 56.2 67 53.7
AT5G33320 Arabidopsis thaliana HOM05D000462 ORTHO05D002607 2.9e-06 55.8 67 53.7
Carub.0007s3069 Capsella rubella HOM05D000462 ORTHO05D002607 2.9e-06 55.8 67 53.7
Cpa.g.sc76.37 Carica papaya HOM05D000462 ORTHO05D002607 2.9e-06 55.8 65 53.8
AUR62008198 Chenopodium quinoa HOM05D000462 ORTHO05D002607 2.9e-06 55.8 61 57.4
AUR62030951 Chenopodium quinoa HOM05D000462 ORTHO05D002607 2.9e-06 55.8 61 57.4
Lj4g0020457 Lotus japonicus HOM05D000462 ORTHO05D002607 2.9e-06 55.8 67 53.7
Os09g0297400 Oryza sativa ssp. japonica HOM05D000462 ORTHO05D002607 2.9e-06 55.8 67 53.7
Duzib068G1149 Durio zibethinus HOM05D000462 ORTHO05D002607 3.8e-06 55.5 65 53.8
Eucgr.B00299 Eucalyptus grandis HOM05D000462 ORTHO05D002607 3.8e-06 55.5 62 54.8
Mapoly0083s0074 Marchantia polymorpha HOM05D000462 ORTHO05D002607 3.8e-06 55.5 62 54.8
Peaxi162Scf00255g01119 Petunia axillaris HOM05D000462 ORTHO05D002607 3.8e-06 55.5 67 53.7
THA.LOC104824979 Tarenaya hassleriana HOM05D000462 ORTHO05D002607 3.8e-06 55.5 67 53.7
Aqoxy3G01084 Aquilegia oxysepala HOM05D000462 ORTHO05D002607 4.9e-06 55.1 62 54.8
EL10Ac5g10735 Beta vulgaris HOM05D000462 ORTHO05D002607 4.9e-06 55.1 61 55.7
CiPaw.12G027600 Carya illinoinensis HOM05D000462 ORTHO05D002607 4.9e-06 55.1 61 55.7
CDE12G0842 Ceratophyllum demersum HOM05D000462 ORTHO05D002607 4.9e-06 55.1 67 52.2
Duzib205G0222 Durio zibethinus HOM05D000462 ORTHO05D002607 4.9e-06 55.1 65 55.4
Glyma.17G088500 Glycine max HOM05D000462 ORTHO05D002607 4.9e-06 55.1 67 53.7
Pp3c20_5750 Physcomitrium patens HOM05D000462 ORTHO05D002607 4.9e-06 55.1 81 49.4
Ah.11g051520 Amaranthus hybridus HOM05D000462 ORTHO05D002607 8.4e-06 54.3 61 55.7
AagrBONN_evm.TU.Sc2ySwM_228.106 Anthoceros agrestis HOM05D000462 ORTHO05D002607 8.4e-06 54.3 61 55.7
Gohir.A12G274700 Gossypium hirsutum HOM05D000462 ORTHO05D002607 8.4e-06 54.3 62 54.8
Gohir.D12G275400 Gossypium hirsutum HOM05D000462 ORTHO05D002607 8.4e-06 54.3 62 54.8
Gorai.008G295900 Gossypium raimondii HOM05D000462 ORTHO05D002607 8.4e-06 54.3 62 54.8
Nn4g22727 Nelumbo nucifera HOM05D000462 ORTHO05D002607 8.4e-06 54.3 67 50.7
QL10p011085 Quercus lobata HOM05D000462 ORTHO05D002607 8.4e-06 54.3 60 56.7
SEGI_07711 Sequoiadendron giganteum HOM05D000462 ORTHO05D002607 8.4e-06 54.3 62 53.2
TAR629G1641 Trochodendron aralioides HOM05D000462 ORTHO05D002607 8.4e-06 54.3 60 55.0


User provided reference genes

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