Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0745G014 Amborella trichopoda HOM05D007414 ORTHO05D009482 3.0e-254 881.3 439 100.0
Nn7g36686 Nelumbo nucifera HOM05D007414 ORTHO05D009482 4.8e-127 458.8 379 63.6
TAR623G0974 Trochodendron aralioides HOM05D007414 ORTHO05D009482 4.1e-126 455.7 379 63.9
GSVIVG01013487001 Vitis vinifera HOM05D007414 ORTHO05D009482 4.5e-125 452.2 437 56.1
COL.COLO4_20658 Corchorus olitorius HOM05D007414 ORTHO05D009482 4.2e-123 445.7 399 58.6
QL04p017831 Quercus lobata HOM05D007414 ORTHO05D009482 1.4e-121 440.7 454 53.3
RcHm_v2.0_Chr1g0324301 Rosa chinensis HOM05D007414 ORTHO05D009482 2.0e-120 436.8 446 52.9
FAN10G2712 Fragaria x ananassa HOM05D007414 ORTHO05D009482 2.6e-120 436.4 442 53.4
FAN06G2659 Fragaria x ananassa HOM05D007414 ORTHO05D009482 5.7e-120 435.3 442 53.4
FvH4_7g03070 Fragaria vesca HOM05D006097 ORTHO05D008538 7.5e-120 434.9 442 53.4
FAN03G2686 Fragaria x ananassa HOM05D007414 ORTHO05D009482 7.5e-120 434.9 442 52.7
CANSAT56G3550 Cannabis sativa HOM05D007414 ORTHO05D009482 4.8e-119 432.2 439 54.4
CiPaw.13G013700 Carya illinoinensis HOM05D007414 ORTHO05D009482 4.8e-119 432.2 402 57.7
Eucgr.G03234 Eucalyptus grandis HOM05D007414 ORTHO05D009482 4.1e-118 429.1 379 58.8
Hma1.2p1_1202F.1_g266840 Hydrangea macrophylla HOM05D007414 ORTHO05D009482 4.1e-118 429.1 379 60.7
Duzib114G0511 Durio zibethinus HOM05D007414 ORTHO05D009482 9.1e-118 427.9 444 53.8
Actinidia02265 Actinidia chinensis HOM05D007414 ORTHO05D009482 1.2e-117 427.6 403 58.3
MD02G1287000 Malus domestica HOM05D007414 ORTHO05D009482 1.6e-117 427.2 440 54.5
Thecc.10G154500 Theobroma cacao HOM05D007414 ORTHO05D009482 7.7e-117 424.9 441 53.3
Dinv22037 Davidia involucrata HOM05D007414 ORTHO05D009482 1.0e-116 424.5 435 53.6
TWI15G0498 Tripterygium wilfordii HOM05D007414 ORTHO05D009482 2.2e-116 423.3 442 52.7
vmacro12698 Vaccinium macrocarpon HOM05D007414 ORTHO05D009482 2.9e-116 422.9 457 52.7
VMungo1080G1369 Vigna mungo HOM05D007414 ORTHO05D009482 2.9e-116 422.9 378 58.2
Medtr3g014680 Medicago truncatula HOM05D007414 ORTHO05D009482 1.2e-114 417.5 379 58.0
Phvul.005G026400 Phaseolus vulgaris HOM05D007414 ORTHO05D009482 1.2e-114 417.5 379 59.4
Atru.chr12.1333 Acer truncatum HOM05D007414 ORTHO05D009482 1.6e-114 417.2 405 56.3
CSS0022385 Camellia sinensis var. sinensis HOM05D007414 ORTHO05D009482 1.6e-114 417.2 379 60.2
Glyma.04G137000 Glycine max HOM05D007414 ORTHO05D009482 2.1e-114 416.8 378 57.4
PGR031G2549 Punica granatum HOM05D007414 ORTHO05D009482 2.1e-114 416.8 402 56.7
arahy.Tifrunner.gnm1.ann1.XZAR1L Arachis hypogaea HOM05D007414 ORTHO05D009482 2.7e-114 416.4 379 58.3
Gorai.010G216100 Gossypium raimondii HOM05D007414 ORTHO05D009482 3.6e-114 416.0 379 56.7
arahy.Tifrunner.gnm1.ann1.GMDI7B Arachis hypogaea HOM05D007414 ORTHO05D009482 6.1e-114 415.2 379 58.0
Cc02_g30210 Coffea canephora HOM05D007414 ORTHO05D009482 8.0e-114 414.8 379 57.3
Manes.11G006000 Manihot esculenta HOM05D007414 ORTHO05D009482 8.0e-114 414.8 441 53.1
Potri.001G027600 Populus trichocarpa HOM05D007414 ORTHO05D009482 1.0e-113 414.5 379 58.8
MSTRG.20514 Avicennia marina HOM05D007414 ORTHO05D009482 3.0e-113 412.9 380 59.2
Lalb_Chr25g0282101 Lupinus albus HOM05D007414 ORTHO05D009482 3.0e-113 412.9 379 58.0
Lj3g0021878 Lotus japonicus HOM05D007414 ORTHO05D009482 5.2e-113 412.1 378 57.7
CsaV3_5G024500 Cucumis sativus L. HOM05D007414 ORTHO05D009482 8.8e-113 411.4 400 55.8
Gohir.D10G192600 Gossypium hirsutum HOM05D007414 ORTHO05D009482 1.5e-112 410.6 399 56.1
Gorai.011G215300 Gossypium raimondii HOM05D007414 ORTHO05D009482 3.4e-112 409.5 399 56.1
Glyma.11G155300 Glycine max HOM05D007414 ORTHO05D009482 4.8e-111 405.6 378 56.3
PSO384G0147 Papaver somniferum HOM05D007414 ORTHO05D009482 1.1e-110 404.4 434 51.8
Gohir.A10G185400 Gossypium hirsutum HOM05D007414 ORTHO05D009482 2.4e-110 403.3 399 55.1
PSO339G0457 Papaver somniferum HOM05D007414 ORTHO05D009482 7.0e-110 401.7 414 53.4
Ciclev10028543m.g Citrus clementina HOM05D007414 ORTHO05D009482 1.6e-109 400.6 380 56.1
Solyc01g096400.4 Solanum lycopersicum HOM05D007414 ORTHO05D009482 2.7e-109 399.8 380 57.4
Sopen01g040130 Solanum pennellii HOM05D007414 ORTHO05D009482 1.0e-108 397.9 380 57.1
CAN.G1045.37 Capsicum annuum HOM05D007414 ORTHO05D009482 1.3e-108 397.5 379 57.0
DCAR_031835 Daucus carota HOM05D007414 ORTHO05D009482 3.8e-108 396.0 378 55.8
Sabra01G0020000 Salix brachista HOM05D007414 ORTHO05D009482 3.8e-108 396.0 411 54.3
AUR62032647 Chenopodium quinoa HOM05D007414 ORTHO05D009482 5.0e-108 395.6 377 55.4
Nitab4.5_0004955g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 8.6e-108 394.8 379 57.0
Sc11g0006450 Simmondsia chinensis HOM05D007414 ORTHO05D009482 1.5e-107 394.0 377 56.2
Nitab4.5_0000307g0260 Nicotiana tabacum HOM05D007414 ORTHO05D009482 1.9e-107 393.7 379 57.3
Sed0006433 Sechium edule HOM05D007414 ORTHO05D009482 1.9e-107 393.7 345 58.3
PGSC0003DMG400018334 Solanum tuberosum HOM05D007414 ORTHO05D009482 2.5e-107 393.3 379 55.7
Lsat_1_v5_gn_4_29901 Lactuca sativa HOM05D007414 ORTHO05D009482 6.1e-106 388.7 399 55.4
Aqoxy1G00360 Aquilegia oxysepala HOM05D007414 ORTHO05D009482 2.3e-105 386.7 443 50.8
SEGI_40936 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 5.2e-105 385.6 392 54.1
THA.LOC104826727 Tarenaya hassleriana HOM05D007414 ORTHO05D009482 6.8e-105 385.2 380 54.7
MELO3C005149.2 Cucumis melo HOM05D007414 ORTHO05D009482 1.5e-104 384.0 426 51.2
Manes.15G192920 Manihot esculenta HOM05D007414 ORTHO05D009482 1.5e-104 384.0 365 57.8
ClCG01G007530 Citrullus lanatus HOM05D007414 ORTHO05D009482 2.6e-104 383.3 379 54.4
Nn7g36678 Nelumbo nucifera HOM05D007414 ORTHO05D009482 1.3e-103 380.9 365 55.6
HanXRQChr16g0525321 Helianthus annuus HOM05D007414 ORTHO05D009482 1.7e-103 380.6 378 54.8
ECA234G1800 Erigeron canadensis HOM05D007414 ORTHO05D009482 3.7e-103 379.4 405 52.1
Ah.12g062800 Amaranthus hybridus HOM05D007414 ORTHO05D009482 3.2e-102 376.3 361 54.6
Gohir.A06G174800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 7.0e-102 375.2 328 58.5
Gohir.D06G184800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 1.6e-101 374.0 388 52.3
EL10Ac2g02800 Beta vulgaris HOM05D007414 ORTHO05D009482 1.3e-100 370.9 410 49.3
Rhsim01G0124300 Rhododendron simsii HOM05D007414 ORTHO05D009482 2.3e-100 370.2 397 53.4
Potri.003G196200 Populus trichocarpa HOM05D007414 ORTHO05D009482 7.3e-99 365.2 377 51.5
Peaxi162Scf00767g00524 Petunia axillaris HOM05D007414 ORTHO05D009482 4.6e-93 345.9 334 54.8
Hund13359 Selenicereus undatus HOM05D007414 ORTHO05D009482 1.7e-92 344.0 395 48.9
AUR62026859 Chenopodium quinoa HOM05D007414 ORTHO05D009482 1.4e-86 324.3 317 53.3
Haze_03038 Corylus avellana HOM05D007414 ORTHO05D009482 6.0e-85 318.9 433 46.4
Psat5g222240 Pisum sativum HOM05D007414 ORTHO05D009482 7.1e-78 295.4 297 52.5
Dinv32026 Davidia involucrata HOM05D007414 ORTHO05D009482 3.5e-77 293.1 250 60.8
Prupe.2G036300 Prunus persica HOM05D007414 ORTHO05D009482 7.3e-75 285.4 296 53.0
AagrBONN_evm.TU.Sc2ySwM_362.1466 Anthoceros agrestis HOM05D007414 ORTHO05D009482 8.4e-71 271.9 397 43.6
MBI19_g25612_MAGBIO Magnolia biondii HOM05D007414 ORTHO05D009482 1.9e-70 270.8 233 60.1
Mapoly0007s0139 Marchantia polymorpha HOM05D007414 ORTHO05D009482 4.3e-67 259.6 410 40.2
Pp3c11_910 Physcomitrium patens HOM05D007414 ORTHO05D009482 8.1e-66 255.4 396 40.9
Migut.O00949 Erythranthe guttata HOM05D007414 ORTHO05D009482 3.4e-64 250.0 267 52.4
Zm00001eb128490 Zea mays HOM05D007414 ORTHO05D009482 1.6e-61 241.1 201 62.2
Os01g0272800 Oryza sativa ssp. japonica HOM05D007414 ORTHO05D009482 1.4e-49 201.4 216 51.4
DCAR_000332 Daucus carota HOM05D007414 ORTHO05D009482 5.8e-40 169.5 183 53.0
TPR.G1409 Trifolium pratense HOM05D007414 ORTHO05D009482 4.1e-33 146.7 131 58.0
Migut.B01233 Erythranthe guttata HOM05D007414 ORTHO05D009482 2.2e-31 141.0 150 53.3
Nitab4.5_0008639g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 3.3e-27 127.1 104 63.5
PRCOL_00005884 Prasinoderma coloniale HOM05D007414 ORTHO05D009482 1.1e-11 75.5 265 29.1
MCO02G191 Micromonas commoda HOM05D007414 ORTHO05D009482 1.5e-11 75.1 337 28.2
Lsat_1_v5_gn_0_2021 Lactuca sativa HOM05D007414 ORTHO05D009482 3.7e-10 70.5 76 44.7
SEGI_36011 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 1.6e-08 65.1 62 58.1
MD02G1286500 Malus domestica HOM05D007414 ORTHO05D009482 3.5e-08 63.9 71 52.1
PRCOL_00006348 Prasinoderma coloniale HOM05D007414 ORTHO05D333730 6.5e-07 59.7 125 33.6
Lsat_1_v5_gn_3_3821 Lactuca sativa HOM05D007414 ORTHO05D009482 3.2e-06 57.4 49 51.0


User provided reference genes

Program Settings