Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0743G268 Amborella trichopoda HOM05D006262 ORTHO05D007266 7.8e-250 866.7 448 100.0
MBI08_g33651_MAGBIO Magnolia biondii HOM05D006262 ORTHO05D007266 7.2e-102 375.2 420 52.6
TAR362G0090 Trochodendron aralioides HOM05D006262 ORTHO05D007266 1.4e-97 360.9 415 51.6
Dinv22693 Davidia involucrata HOM05D006262 ORTHO05D007266 3.8e-95 352.8 418 48.1
Hma1.2p1_0597F.1_g186430 Hydrangea macrophylla HOM05D006262 ORTHO05D007266 7.4e-91 338.6 381 49.6
Cfa015775 Carpinus fangiana HOM05D006262 ORTHO05D007266 2.4e-89 333.6 389 50.4
CSS0049911 Camellia sinensis var. sinensis HOM05D006262 ORTHO05D007266 3.1e-89 333.2 389 50.6
HanXRQChr15g0494811 Helianthus annuus HOM05D006262 ORTHO05D007266 3.5e-88 329.7 463 45.6
Aqoxy2G04115 Aquilegia oxysepala HOM05D006262 ORTHO05D007266 2.5e-86 323.6 434 45.9
BraA03t11623Z Brassica rapa HOM05D006262 ORTHO05D007266 2.5e-86 323.6 377 48.5
A03p24130 Brassica napus HOM05D006262 ORTHO05D007266 7.2e-86 322.0 377 48.3
BcaB01g03403 Brassica carinata HOM05D006262 ORTHO05D007266 2.1e-85 320.5 390 47.7
Lalb_Chr02g0144321 Lupinus albus HOM05D006262 ORTHO05D007266 2.1e-85 320.5 420 47.1
Glyma.20G245900 Glycine max HOM05D006262 ORTHO05D007266 3.6e-85 319.7 421 46.8
Manes.04G048800 Manihot esculenta HOM05D006262 ORTHO05D007266 1.8e-84 317.4 424 45.5
vmacro00601 Vaccinium macrocarpon HOM05D006262 ORTHO05D007266 3.0e-84 316.6 459 44.4
Potri.007G124600 Populus trichocarpa HOM05D006262 ORTHO05D007266 3.9e-84 316.2 416 44.7
Rhsim09G0030700 Rhododendron simsii HOM05D006262 ORTHO05D007266 3.9e-84 316.2 418 45.9
Lsat_1_v5_gn_2_51881 Lactuca sativa HOM05D006262 ORTHO05D007266 8.8e-84 315.1 452 45.1
Nn1g09825 Nelumbo nucifera HOM05D006262 ORTHO05D007266 1.1e-83 314.7 395 48.4
DCAR_023918 Daucus carota HOM05D006262 ORTHO05D007266 2.0e-83 313.9 383 47.8
C03p28720 Brassica napus HOM05D006262 ORTHO05D007266 4.4e-83 312.8 397 46.6
Thhalv10001453m.g Eutrema salsugineum HOM05D006262 ORTHO05D007266 5.7e-83 312.4 429 43.8
Atru.chr3.1601 Acer truncatum HOM05D006262 ORTHO05D007266 3.7e-82 309.7 435 45.3
Atru.chr3.1609 Acer truncatum HOM05D006262 ORTHO05D007266 3.7e-82 309.7 435 45.3
Carub.0004s2570 Capsella rubella HOM05D006262 ORTHO05D007266 6.3e-82 308.9 378 46.8
BolC3t15234H Brassica oleracea HOM05D006262 ORTHO05D007266 1.8e-81 307.4 395 45.8
ClCG07G015820 Citrullus lanatus HOM05D006262 ORTHO05D007266 1.8e-81 307.4 386 47.7
Thecc.05G002700 Theobroma cacao HOM05D006262 ORTHO05D007266 2.4e-81 307.0 426 45.5
Phvul.007G004000 Phaseolus vulgaris HOM05D006262 ORTHO05D007266 3.1e-81 306.6 407 46.2
CANSAT78G0581 Cannabis sativa HOM05D006262 ORTHO05D007266 4.1e-81 306.2 381 48.0
CARHR138310 Cardamine hirsuta HOM05D006262 ORTHO05D007266 4.1e-81 306.2 378 46.6
Solyc09g098530.4 Solanum lycopersicum HOM05D006262 ORTHO05D007266 5.3e-81 305.8 386 47.2
AL4G41890 Arabidopsis lyrata HOM05D006262 ORTHO05D007266 7.0e-81 305.4 389 45.2
Sp4g25360 Schrenkiella parvula HOM05D006262 ORTHO05D007266 7.0e-81 305.4 380 46.6
TWI63G1082 Tripterygium wilfordii HOM05D006262 ORTHO05D007266 7.0e-81 305.4 383 49.1
Ciclev10020134m.g Citrus clementina HOM05D006262 ORTHO05D007266 1.2e-80 304.7 379 47.8
BcaC01g05249 Brassica carinata HOM05D006262 ORTHO05D007266 1.6e-80 304.3 379 46.4
Sopen09g036450 Solanum pennellii HOM05D006262 ORTHO05D007266 1.6e-80 304.3 388 46.9
FvH4_4g11340 Fragaria vesca HOM05D006262 ORTHO05D007266 2.6e-80 303.5 378 46.8
VMungo0720G2273 Vigna mungo HOM05D006262 ORTHO05D007266 5.9e-80 302.4 426 44.4
CDE09G0849 Ceratophyllum demersum HOM05D006262 ORTHO05D007266 7.7e-80 302.0 300 56.7
PGSC0003DMG400021613 Solanum tuberosum HOM05D006262 ORTHO05D007266 7.7e-80 302.0 440 43.4
MELO3C017699.2 Cucumis melo HOM05D006262 ORTHO05D007266 1.3e-79 301.2 452 43.8
Aa31LG1G25040 Aethionema arabicum HOM05D006262 ORTHO05D007266 2.9e-79 300.1 400 45.8
AT2G43235 Arabidopsis thaliana HOM05D006262 ORTHO05D007266 2.9e-79 300.1 378 45.5
Lj5g0018354 Lotus japonicus HOM05D006262 ORTHO05D007266 3.8e-79 299.7 387 45.2
Medtr1g116540 Medicago truncatula HOM05D006262 ORTHO05D007266 3.8e-79 299.7 399 45.6
Sc13g0007690 Simmondsia chinensis HOM05D006262 ORTHO05D007266 3.8e-79 299.7 420 45.0
ECA238G4140 Erigeron canadensis HOM05D000005 ORTHO05D000012 6.5e-79 298.9 388 45.6
CsaV3_4G003530 Cucumis sativus L. HOM05D006262 ORTHO05D007266 8.5e-79 298.5 447 43.2
RcHm_v2.0_Chr4g0407651 Rosa chinensis HOM05D006262 ORTHO05D007266 1.5e-78 297.7 378 46.0
Sed0004128 Sechium edule HOM05D006262 ORTHO05D007266 1.5e-78 297.7 449 43.0
Prupe.1G187900 Prunus persica HOM05D006262 ORTHO05D007266 1.9e-78 297.4 378 46.6
Ca_29592_v3 Cicer arietinum L. HOM05D006262 ORTHO05D007266 4.2e-78 296.2 426 45.5
COL.COLO4_14416 Corchorus olitorius HOM05D006262 ORTHO05D007266 4.2e-78 296.2 431 44.1
Migut.N03113 Erythranthe guttata HOM05D006262 ORTHO05D007266 4.2e-78 296.2 432 44.2
Eucgr.A00253 Eucalyptus grandis HOM05D006262 ORTHO05D007266 4.2e-78 296.2 334 50.3
MD04G1038000 Malus domestica HOM05D006262 ORTHO05D007266 7.2e-78 295.4 376 46.3
PGR142G3389 Punica granatum HOM05D006262 ORTHO05D007266 9.4e-78 295.0 435 45.5
Cc03_g13170 Coffea canephora HOM05D006262 ORTHO05D007266 4.7e-77 292.7 392 44.1
QL10p047365 Quercus lobata HOM05D006262 ORTHO05D007266 6.1e-77 292.4 424 45.0
PSO675G4698 Papaver somniferum HOM05D006262 ORTHO05D007266 1.4e-76 291.2 395 45.3
PSO017G4626 Papaver somniferum HOM05D006262 ORTHO05D007266 2.3e-76 290.4 387 46.0
MSTRG.24585 Avicennia marina HOM05D006262 ORTHO05D007266 5.7e-75 285.8 378 45.0
Duzib093G0344 Durio zibethinus HOM05D006262 ORTHO05D007266 5.7e-75 285.8 407 44.0
arahy.Tifrunner.gnm1.ann1.BL35NN Arachis hypogaea HOM05D006262 ORTHO05D007266 6.3e-74 282.3 342 48.8
arahy.Tifrunner.gnm1.ann1.6Y9ITK Arachis hypogaea HOM05D006262 ORTHO05D007266 8.3e-74 282.0 380 45.5
Sabra07G0100700 Salix brachista HOM05D006262 ORTHO05D002297 4.1e-73 279.6 411 41.8
TPR.G10421 Trifolium pratense HOM05D006262 ORTHO05D007266 3.5e-72 276.6 407 43.2
SalBow6G1208 Salvia bowleyana HOM05D006262 ORTHO05D007266 5.0e-71 272.7 435 40.0
HPP92_024424 Vanilla planifolia HOM05D006262 ORTHO05D007266 6.5e-71 272.3 374 43.0
EL10Ac3g06302 Beta vulgaris HOM05D006262 ORTHO05D007266 3.2e-70 270.0 416 40.9
Lj3A232G38 Lonicera japonica HOM05D006262 ORTHO05D007266 3.6e-69 266.5 398 42.0
unitig_27.g25149 Utricularia gibba HOM05D006262 ORTHO05D007266 2.3e-68 263.8 376 42.8
Ah.07g204100 Amaranthus hybridus HOM05D006262 ORTHO05D007266 4.0e-68 263.1 438 40.0
Hund22599 Selenicereus undatus HOM05D006262 ORTHO05D007266 2.0e-67 260.8 412 41.7
Zm00001eb350760 Zea mays HOM05D006262 ORTHO05D007266 1.3e-66 258.1 405 41.5
Gohir.A04G096300 Gossypium hirsutum HOM05D006262 ORTHO05D007266 1.7e-66 257.7 349 45.3
Gohir.D04G136100 Gossypium hirsutum HOM05D006262 ORTHO05D007266 2.8e-66 256.9 349 45.0
GSVIVG01013579001 Vitis vinifera HOM05D006262 ORTHO05D007266 2.4e-65 253.8 252 54.0
Gorai.012G119900 Gossypium raimondii HOM05D006262 ORTHO05D007266 3.1e-65 253.4 349 45.0
Os05g0299200 Oryza sativa ssp. japonica HOM05D006262 ORTHO05D007266 2.7e-64 250.4 428 39.3
Haze_00720 Corylus avellana HOM05D006262 ORTHO05D007266 7.2e-62 242.3 489 37.0
Psat6g241480 Pisum sativum HOM05D006262 ORTHO05D007266 8.9e-60 235.3 365 41.4
Oeu029569.3 Olea europaea HOM05D006262 ORTHO05D007266 3.7e-58 229.9 443 37.0
SEGI_17174 Sequoiadendron giganteum HOM05D006262 ORTHO05D007266 8.6e-55 218.8 409 38.9
Ca_11400_v3 Cicer arietinum L. HOM05D006262 ORTHO05D007266 3.3e-54 216.9 426 40.1
Ca_11403_v3 Cicer arietinum L. HOM05D006262 ORTHO05D007266 9.5e-54 215.3 409 40.3
AagrBONN_evm.TU.Sc2ySwM_344.5117 Anthoceros agrestis HOM05D006262 ORTHO05D007266 9.8e-51 205.3 411 34.3
Peaxi162Scf00286g00119 Petunia axillaris HOM05D006262 ORTHO05D007266 1.3e-50 204.9 167 61.7
Nitab4.5_0002908g0080 Nicotiana tabacum HOM05D006262 ORTHO05D007266 1.1e-49 201.8 160 63.8
Nitab4.5_0001049g0110 Nicotiana tabacum HOM05D006262 ORTHO05D007266 1.6e-48 198.0 168 60.7
CiPaw.01G102600 Carya illinoinensis HOM05D006262 ORTHO05D007266 3.6e-45 186.8 288 43.4
Mapoly0004s0159 Marchantia polymorpha HOM05D006262 ORTHO05D007266 8.0e-45 185.7 485 30.1
SMO351G0235 Selaginella moellendorffii HOM05D006262 ORTHO05D007266 6.8e-44 182.6 320 37.8
AUR62002605 Chenopodium quinoa HOM05D006262 ORTHO05D007266 2.6e-43 180.6 387 34.4
AUR62030023 Chenopodium quinoa HOM05D006262 ORTHO05D007266 3.4e-43 180.3 387 34.6
Pp3c12_3930 Physcomitrium patens HOM05D006262 ORTHO05D007266 1.7e-39 167.9 421 30.2
SGA_v2.0_scaffold31G12573 Striga asiatica HOM05D006262 ORTHO05D007266 1.6e-37 161.4 428 31.1
Hma1.2p1_0597F.1_g186420 Hydrangea macrophylla HOM05D006262 ORTHO05D007266 7.6e-35 152.5 119 65.5
Pp3c9_3680 Physcomitrium patens HOM05D006262 ORTHO05D007266 1.1e-28 132.1 401 26.9
Cpa.g.sc71.28 Carica papaya HOM05D006262 ORTHO05D007266 3.8e-26 123.6 188 40.4
Hma1.2p1_0597F.1_g186440 Hydrangea macrophylla HOM05D006262 ORTHO05D007266 4.6e-24 116.7 203 36.0
Nitab4.5_0002908g0070 Nicotiana tabacum HOM05D006262 ORTHO05D007266 5.6e-22 109.8 222 34.2
Nitab4.5_0001049g0100 Nicotiana tabacum HOM05D006262 ORTHO05D007266 2.1e-21 107.8 223 34.1
MCO03G554 Micromonas commoda HOM05D006262 ORTHO05D007266 1.8e-20 104.8 285 29.1
Cpa.g.sc71.30 Carica papaya HOM05D006262 ORTHO05D007266 7.6e-19 99.4 79 65.8
CAN.G688.4 Capsicum annuum HOM05D006262 ORTHO05D007266 2.3e-15 87.8 66 62.1
FAN17G0796 Fragaria x ananassa HOM05D006262 ORTHO05D007266 6.6e-15 86.3 75 57.3
Cre01.g049900 Chlamydomonas reinhardtii HOM05D006262 ORTHO05D007266 1.9e-14 84.7 315 24.8
PRCOL_00005486 Prasinoderma coloniale HOM05D006262 ORTHO05D007266 7.3e-14 82.8 218 29.4
Peaxi162Scf00286g10017 Petunia axillaris HOM05D006262 ORTHO05D007266 1.1e-12 79.0 299 28.4
QL09p046233 Quercus lobata HOM05D006262 ORTHO05D007266 2.0e-11 74.7 83 51.8
CAN.G51.2 Capsicum annuum HOM05D006262 ORTHO05D007266 2.6e-11 74.3 71 52.1
FvH4_c17g00080 Fragaria vesca HOM05D006262 ORTHO05D007266 1.7e-10 71.6 49 69.4
GSVIVG01020265001 Vitis vinifera HOM05D006262 ORTHO05D007266 1.7e-10 71.6 105 41.9
FAN07G2249 Fragaria x ananassa HOM05D006262 ORTHO05D007266 1.9e-09 68.2 46 67.4
AagrBONN_evm.TU.Sc2ySwM_368.1862 Anthoceros agrestis HOM05D005935 ORTHO05D007012 4.6e-08 63.5 72 52.8
BraA10t42873Z Brassica rapa HOM05D006262 ORTHO05D007266 3.9e-07 60.5 201 28.9


User provided reference genes

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